Acipenser ruthenus (sterlet): 117405104
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Entry
117405104 CDS
T07327
Symbol
dis3
Name
(RefSeq) exosome complex exonuclease RRP44
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117405104 (dis3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arut03019
]
117405104 (dis3)
Messenger RNA biogenesis [BR:
arut03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
117405104 (dis3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
PIN_4
Rrp44_CSD1
Rrp44_S1
CSD2
OB_HELZ2
Toxin_R_bind_C
Dis3l2_C_term
Motif
Other DBs
NCBI-GeneID:
117405104
NCBI-ProteinID:
XP_033863792
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All DBs
Position
9:complement(6315476..6330850)
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AA seq
951 aa
AA seq
DB search
MLKSKTFVKKTRSGGVMKIVREHYLRDDIWCGSEVCDSCKQGSPVLQQDPCLESSLCKCP
HYILPDTNVVLHQIDVLEDPAITNVIILQTVLQEARHRSAPVYKRIKDVIHNVERHFYTF
TNEHHRETYIEQAQGESANDRNDRAIRVAAKWYSEHLKKDQKEEGFQIILLTNDKKNKEK
AEEAGLVAYTCEEYIQSLVANPELVDRLASTPDDVNEIESGKIIFQEHLPLSKLQQGIKS
GTYLQGTFRSNRDNYLEATVWVHGDTEENKEVLIQGLKNLNRAVHEDVVAVQLLPKDQWV
APSSVVLQDEGTTEDDEEEEKENSLKSVVHESMLKPTGKVVGIIKRNWRPYCGMLSKSQI
KEARKHLFTPADRRIPRIRIETRQASTLEGQRIIVAIDGWPKNSRYPNGHFVRNLGIAGD
KETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEEDFKSRKDLRHIGVCSVDPPGCTD
IDDALHCRDLENGNLEVGVHIADVSHFIRPGNALDQEAASRGTTVYLCEKRIDMVPELLS
SNLCSLRSNVERLAFSCIWEMNHDAEIINTKFTKSVINSKASLTYAEAQMRIDDTSMNDE
ITRSLRGLNRLAKILKKKRIEMGALTLSSPEVRFHIDSETHDPIDLQTKELKETNSMVEE
FMLLANISVAKKIYEEFAECALLRKHPAPPPSNYDMLVKAAKSKDLDIRTDSAKALADSL
DAAQVGGFPYFNTLLRILATRCMMQAVYFCSGMDTDFHHYGLASPIYTHFTSPIRRYSDI
IVHRLLAVSIGADITYPDLMDKHKQAALCNNLNYRHKMSQYAQRSSVAFHTQLFFKSKGI
INEEGFILFVKKNAIVVLIPKFGLEGTVFFENKDKPNPRLSFKEEIPTLTVEDTVFRVFD
KVKVTISLDASNVQHQKIRMSLVEPVIPGVSVSPQSNCNSEPDAKKPKLES
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagtctaagacgttcgtaaaaaagacccgctccggcggggtgatgaagattgtc
cgcgagcactatctccgggatgatatctggtgtggaagtgaagtttgtgattcgtgcaag
cagggttctcccgtgttgcagcaggacccgtgcttggaaagtagcctttgtaaatgtcct
cactacatactaccggacacaaatgtagttttacatcagattgacgtccttgaggatccc
gctatcaccaatgtgatcatcctgcagacagtactacaagaagcaagacacaggagcgct
cctgtgtacaagagaattaaagacgtcatccataatgtagagaggcatttctacacgttc
accaatgaacaccacagagaaacctacattgaacaagcacaaggtgaaagtgcaaacgac
cgcaacgatagggcgatccgtgtggcggccaaatggtacagtgaacacctgaaaaaagac
cagaaagaggagggcttccaaattattttacttacaaatgacaaaaagaacaaagagaag
gctgaagaagctgggctggtggcatacacatgtgaagagtacattcaaagtttggttgca
aatcctgaactggtagaccgccttgcttcaacaccagatgatgtgaatgagattgaaagt
ggtaaaataatctttcaagagcatcttccactgtcaaagctgcagcagggaatcaaatct
ggaacttaccttcaaggcacctttcgatctaacagagacaattacctggaggcgactgtg
tgggtccatggagatactgaagagaataaagaggttctcattcagggcctgaagaatcta
aacagagcagtccatgaggatgtggttgcagtgcagttactgcccaaagaccagtgggtg
gcaccatcctctgttgtacttcaagatgaagggactacagaagatgatgaggaagaggaa
aaggaaaactcactgaagagtgtagtgcatgagagtatgctgaagcctactggaaaagta
gtgggcattatcaagaggaactggagaccttactgcggaatgctttcaaagtcacaaatt
aaagaggcaagaaagcacttgtttactcctgcggaccgcaggattcctcgaatcagaata
gaaacccgacaagcatctaccttagaaggacagaggattattgtagcaattgatggttgg
ccaaaaaattctagataccccaatggtcactttgtgagaaacttgggaattgctggagac
aaagaaactgagactgaagtccttctccttgagcatgatgtccctcaccagcccttttct
caagcggtcctcagtttcctgcccaagatgccatggagcataacagaagaggactttaaa
agcagaaaagacttgaggcatatcggtgtctgcagtgtggatcccccgggttgcacagat
atcgatgatgcactgcactgcagagatttagagaatggaaatctagaggtaggagtacat
atagctgatgtcagccatttcattcgccctgggaatgccttggaccaagaggctgcaagc
agagggacaacagtgtatctatgtgaaaagaggatcgatatggtgcctgaactgctgagc
tccaatttatgttcactgaggtctaatgtggagaggttggctttttcttgtatatgggaa
atgaaccacgacgctgaaattatcaacaccaagtttacaaaaagtgtaattaattcaaag
gcatctcttacttatgcggaagcccaaatgagaatagatgacaccagcatgaacgatgaa
ataaccaggagtttacgaggattgaacagactggcaaaaatactgaagaagaaaaggatt
gaaatgggtgccttaaccctctcctccccagaagtccggtttcatatagacagtgaaact
catgatcccattgatctacagaccaaggaactgaaagaaaccaactctatggtggaagag
ttcatgttgctggcaaatatatctgttgcaaagaagatctatgaagagtttgctgagtgt
gcccttctcagaaaacatccagccccgcctccatcaaactatgacatgcttgttaaggca
gctaaatctaaggacctggatatccggactgattcagcaaaggctcttgcagactctctt
gatgcagcccaggtggggggcttcccctactttaacacactgctgagaatcctggcgact
cgctgcatgatgcaggctgtctacttctgttcaggaatggacactgacttccaccactat
ggtctggcttctcctatctacacacacttcacttccccaattagaaggtactctgatata
atagtgcatcgattactggcagtgtctattggagcagacattacctatccagacctaatg
gacaaacacaagcaagcagctctgtgcaacaacctcaattatcgccataagatgtctcag
tatgcccagaggtcatcggtcgcctttcatactcagctgttcttcaaaagcaaaggaatt
ataaacgaagaaggcttcattctatttgtgaagaaaaatgccatagtagttctcattcca
aaatttgggttggaaggcacagtcttctttgaaaacaaagacaaacccaacccaaggttg
agtttcaaggaggagatacctacactgactgtagaagacactgttttccgtgtgtttgac
aaggtgaaagtgaccataagcttagatgcttcaaatgttcagcatcagaagatcagaatg
tcccttgtggagcctgtgattcctggagtcagtgtatctcctcagtcaaattgcaacagc
gaaccagatgcaaagaaacccaaactggaaagttaa
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