Acipenser ruthenus (sterlet): 117405109
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Entry
117405109 CDS
T07327
Name
(RefSeq) protocadherin-8-like isoform X1
KO
K16499
protocadherin delta 2
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
arut04515
]
117405109
Cell adhesion molecules [BR:
arut04515
]
Cadherins
Protocadherins
117405109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Fibulin_C
DUF5783
TMEM154
Motif
Other DBs
NCBI-GeneID:
117405109
NCBI-ProteinID:
XP_033863799
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Position
9:complement(4236377..4240722)
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AA seq
1003 aa
AA seq
DB search
MGSKKLRDFFPVSLKWALGCYFFNLLFFLPTISEAKTVKYQTYEEEKPETVIGHLAEDLQ
LSATQGGLTSFRMMKQFNTSFIKLRESDGELTIGERIDRERICRQSLQCLIAFDVVSFSK
EQFKLIHVEVEVKDINDNSPEFPHLETSLDVSESAAIGTRIPLEVAVDEDVGSNYIQSYQ
ISVNSHFTIEVLSRADGVKYAELVLLKELDRETQSSHVLELVATDGGSPSRSGTTNINIK
VKDFNDNSPVFDQSSFSVELNEDAPVGFLLLDLNAVDADEGLNGEVVYGFVNQVTSEIRQ
LFQVDRKSGRLTLEHPVDFETKKTYELDVQAYDLGPNPTPAICKIIIHIQDVNDNSPEIS
ITPMTSISAGVAYITEAAAKDSFVALISTSDRDSGVNGKVHCTLYGHDHFKLQQAYEDSY
MIVTTTSLDREKISEYNLTVVAEDLGSPPFRTIKQYTIRVSDENDNAPLFSKTVYEVSVV
ENNSPGAYITTVVARDPDLGHNGKVMYRLVDSEIMGSPVSTFVSVDPATGSIYALRNLNY
EVVKQLQLRIQASDGGSPQLHSTAVINVKIVDQNDNAPSITHPVLINGSAEVLVPRDAPT
GYLITKIKASDADQGVNSELTYRIGREEQHVAFSINKVTGEIYLNREISHEYREVIKITI
TVSDNGRPSLSSTATLHFIITTTAPHSGHVVVAQSPEDNKLFHMDMSVIVIIVLAGSCTL
LLLAIILIATTCNRRKNEKETTGFQGDVDVQMGNGRNNCDTLISSHSGSAFDSRPYCSKS
SFSNSHTTESDMCSSCEDGRDTACMYEAENRLPVSNTECYSALPGFGEEVVRPIAIWKGN
SFSTISARDPEFSGKDSGKGDSDFNDSDSDVSGDGQKKAVVPGNVHNGLWACTSECKILG
HSDRCWSPSAMRASANNSSHTSQSLSSLAKTASLPRETLRRENYYQAHLPKTVGLQSVYE
KVLHIDYDYVLVSPPRPVRIQEINETAVPVYAPTTTTSHTNNV
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgggttcaaagaagcttcgagacttcttccctgtctcgcttaaatgggcgctcgggtgc
tatttttttaacctgttgtttttcttaccaactatttccgaagccaagaccgtgaaatac
cagacctatgaagaagagaagcctgaaacagttatcggacacctagctgaagacctgcag
ttaagtgcaacacagggtggcctgaccagttttcgaatgatgaaacaattcaacacatct
ttcattaaactgagagaaagtgatggagagctgacgattggagagcggattgacagagaa
cgcatctgcaggcagtctctccagtgtctcattgctttcgacgttgtaagcttttccaag
gagcagttcaaactaatccatgttgaggtggaagtaaaagacatcaacgacaactctcct
gagttcccccatctggaaacctcgcttgacgtttcggagagtgcagcgataggtacccga
attccattagaggttgctgtcgatgaagacgtaggctcaaactatattcagagctaccag
atttcggtaaacagtcatttcactatcgaggtcctgagcagagcagatggagttaaatat
gccgagctggttctattgaaagaacttgaccgggaaacccagtcatcacatgtgctggaa
cttgtagccacagacggagggagcccatcacgatcaggtaccaccaacataaatattaaa
gtaaaggatttcaatgacaatagccctgtctttgatcagagctcattctctgtggagctc
aatgaagacgctccagttgggtttctcttactagacttaaacgcagtggatgcagacgaa
gggttaaatggtgaagttgtttatggattcgtcaatcaagtaacatcagaaatccgacag
ctgtttcaagtggaccgcaagtccggtcgtttaacactcgaacacccagtcgacttcgag
actaagaaaacgtatgaacttgacgtgcaagcttacgacttgggccccaaccccacccct
gcaatctgtaaaatcattatccacatccaagacgtgaacgacaattctcctgaaattagt
attactcccatgacatcaattagtgcgggagtagcctacatcacagaagctgcggcgaag
gacagctttgtggctctgatcagcacctcggacagggattccggagttaacggcaaggtg
cactgtactctgtatggacacgatcattttaaattgcagcaagcctatgaagacagctac
atgatcgtaaccaccacatcgctggacagagaaaagatatctgaatacaacctaactgtg
gttgctgaagatttgggttcacccccatttagaaccatcaagcaatacacgatcagagtg
agtgacgaaaatgacaacgcgcctctttttagtaaaaccgtttatgaggtttcagttgta
gaaaacaattctccaggtgcctatatcaccaccgtcgtagcaagggatcctgatctggga
cacaatggcaaagtaatgtacagactcgtagactctgagattatggggtcccccgtttct
acctttgtatctgttgacccagcaacaggttctatttacgcactaagaaatctgaactac
gaagtcgtgaaacaacttcagcttcgaatccaggcaagtgatgggggctccccacagctc
cacagcactgccgtcatcaacgtgaaaatcgtagatcagaatgataacgctccttccatc
acacacccggttttaataaatggatcggccgaggtactggtaccgagagatgcaccgaca
ggttacctaataactaagattaaagctagtgatgcagaccaaggtgtcaactccgagctt
acctacagaatcgggagagaagaacagcatgtggcattttctatcaacaaagtaactggt
gaaatctatttaaaccgcgaaataagccatgaatatcgggaagtaataaaaattaccatc
actgtgagtgacaacggcagaccatcgctctcctcgactgcaactcttcacttcattatt
acaacaacagctccccatagtggtcatgttgtggtggcacagagccccgaagacaacaag
ctctttcacatggacatgtcagtgatcgtcattatagttttggctggtagttgtactctg
cttttacttgccattatcttaattgcaacaacatgcaatagacgcaagaacgaaaaggaa
acaaccggcttccaaggtgatgtggacgtgcagatgggaaatgggagaaacaactgcgac
acgctcatctccagccacagtggaagtgcattcgacagtcgcccttattgtagcaaatca
tcgttctcaaattcacacactactgagagtgacatgtgctccagttgtgaagatgggaga
gacactgcctgcatgtatgaagcagagaacaggctgcctgtttccaatactgagtgttac
tctgctcttcctgggttcggcgaggaggttgtccggccgattgcgatctggaaaggcaat
tctttcagcaccatctcagctcgggaccccgagttcagcggcaaggacagcgggaaggga
gacagcgacttcaatgatagcgactcggacgtgagcggagacgggcaaaagaaggctgtt
gtgccaggaaacgtgcacaacggtctgtgggcgtgtacaagcgaatgcaagatcctcggg
cactcagatagatgctggagcccctccgcaatgagagccagtgcgaacaactcctcacat
acgtcacaaagtctttcttcattggccaagacagcttcgcttccccgggagactctgcga
agagaaaattactaccaagcacacttacccaaaacagtgggattgcaaagcgtatacgag
aaagtcctacatatagactatgactacgtactggtgtctccaccacgacccgtgagaatc
caagaaatcaacgaaaccgctgtgcctgtatacgcaccaaccacgacaacgagccacact
aataatgtttaa
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