Acipenser ruthenus (sterlet): 117405160
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Entry
117405160 CDS
T07327
Name
(RefSeq) tsukushin
KO
K08130
tsukushi
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
arut00535
]
117405160
Proteoglycans [BR:
arut00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
117405160
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Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_RPS2
LRR_EndoS
LRR_FBXL15
LRR_14
LRR_LRWD1
LRR_Zer-1
LRR_NXF1-5
LRR_R13L1-DRL21
LRRNT
DUF6254
Motif
Other DBs
NCBI-GeneID:
117405160
NCBI-ProteinID:
XP_033863885
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All DBs
Position
8
Genome browser
AA seq
347 aa
AA seq
DB search
MDSQLWLCCLLIFTLHVASTESCHPGCRCEVESFGLFDSFSLTKVDCSRVGPHITPIPIP
LDTSYLDLSSNHMETLTDSMLTGPGYTTLVSLDLSNNKLTRVHSKTFSKLRYLESLDLSS
NCLEVLSDGCFSGLPLTEVDLSNNRLQEFRLDIFTSKGHGKPIHLDLSNNVLTAVSRNPH
SSSPNIQSLSLAGNRLTAVPLLQSVPVRSLNLDGNPIPHIQENAFVGMTELTHLSLSSLP
ALTSIQPNSFKGLQNLQVLDLSNCPKLKDLKPEVFSGLLSLQELNLSNSGVTALPSKLLN
YLPSIRSITLGPNLHCWKSRKQGQFHPHTGRVKSGDTLTCDPAATLL
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggattctcagctgtggctctgctgtttgctgatcttcaccctgcatgtcgcctccaca
gagagctgccacccaggatgccgctgcgaggtggagagcttcgggctcttcgacagcttc
agtctgacaaaagtagactgcagtagagtgggaccccatatcacccccattcctatccct
ttagacacctcctatttagatctgtcatccaaccacatggagaccctcacagactccatg
ctgacaggacctggttacaccactttggttagccttgacctgagcaacaacaagctaacc
agggtccacagcaagaccttttccaaactgcgctacctggagtccctggatttaagcagc
aactgtttggaagtgctttcggatgggtgcttctctggcctgccgctcactgaagtggac
ctcagcaacaacaggctgcaggaattcaggctggatatctttacatccaaaggtcacggg
aagccgatccacctagacctctccaacaacgtgctgacagccgtctccagaaacccccac
agcagctctcctaacatccagagcctgagcctggctgggaacagactgacagccgtgccg
ctgctccagagcgtccctgtgagatccctgaatctggacgggaacccaatcccccacata
caggagaatgcctttgtggggatgactgagctgacccatctgtccctcagcagtcttcca
gcactgacctcaatccagcccaacagcttcaaagggctacagaatctacaggtccttgat
ttatcaaactgcccaaagctaaaggatctcaagccagaggtattcagcgggctgctttcc
ttacaggagctcaacttgtccaattcaggggtaactgccttgccaagtaaattgctgaat
tatttaccgagcatcagaagcatcactctgggaccaaacctgcattgctggaagagcagg
aaacaggggcagttccacccgcatacaggacgagtgaagagtggagacacattaacatgc
gatcctgcagccacactcctgtga
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