Acipenser ruthenus (sterlet): 117405181
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Entry
117405181 CDS
T07327
Symbol
tprb
Name
(RefSeq) translocated promoter region b, nuclear basket protein isoform X1
KO
K09291
nucleoprotein TPR
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117405181 (tprb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arut03019
]
117405181 (tprb)
Messenger RNA biogenesis [BR:
arut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117405181 (tprb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
ERM_helical
HALZ
Motif
Other DBs
NCBI-GeneID:
117405181
NCBI-ProteinID:
XP_033863922
LinkDB
All DBs
Position
10:complement(10965007..10987338)
Genome browser
AA seq
2372 aa
AA seq
DB search
MAAVLQQILERTELNKLPKPVQNKLEKFLSDQQSEIDALKARHERFKVDSEQQYFEVEKR
LAQSQDKLVSESQDRHSLQEELNKHNEELKALKVRIKEYEAAQESFSSKQSQLIRTKDEL
EAEKRELVRKLEKSSQEGEHFGEDLRRLNTKLVETNTAKMELQLKLDELQSSEVSIKYRE
KRLEQEKELFQSQNTWLNAELSAKTDELLSVSREKGNEILELKCNLENKKDEVTRLEEQV
STLKASNENFRNQVEDLMGKLKDAKEQQAGMEERFRNELNAHIKLSNLYKSSAADSESKA
GELTRAVEELHKLLKEAEEAIKVTERQQTEMEASKESMEAELKEKIVNMEKELDNANDLL
SAFKRKGVAALTEEELTTMSPTAAAVAKIVKPGMKLTELYNAYVETQDQLLLEKLEIKRV
NKYLDEIVQEVEAKAPILKRQREEYERMQKSVASLSAKLEQAMKEIHRLQKDTDEANKRS
SVLERDNQRSELQLTDMSQQIRVLLIELEEARGNHVIRDDVGEEVSSADISSSSEVISRR
LVTYRNIEELQQQNQRLLVALRELGEAQEKEEQETTSSKVAELQLNLEKALSELERLRDG
RNHQMQLVESIVRQRDMYRILLAQTTGVSFPMQSVSEEIALTSTPRRSPGVTPTVSTPAQ
MSTLQSTELVEARAALKQLQEVFSMDKKEKAENDKILNEHSEKLQEQVTELRSQNTKIST
QLEFASKRYEMLQDNVDGYRREIASMREKCQKLSTTTQKQEQIIHTMTQDLRAVNEKLAV
AEVRGENMRKERDMLKMVESRLYQEKESILAEQRGQNLLLTNLQSIQVTLDRSETETKQR
LNNQIEKQEREIIQLKKKLEYEVEQRHLLGRNQDLQLLEAKKQLETQGAMHLKTKELLKN
AEKEIATLRQQISNAESQLASQVSQGAGAKGPQGAEKDLEDLRTRLRQTEEQNNDLRERL
KTSTSNVEQYRSMVLSLEESLNKEKQVTDEARTTIEARLKESREYQVQLEKKLVEAEKEK
QDLREEKRKAIVNLEEQMSELKKNLTNIQAELQDALQRAAVASSHEQKATQDSQLQAKLA
AESQNKYERELMLHAADVEALQAAKKQVSQTSQMRQELEEKAQRAQAQLLEGKVSWEEQE
RMLKDEVSKLASRCEDLQKQNSLLHEQVESLGNKMVASVQQVTQESNMNISLSEEGKSHE
QILEILRFVRREKEISETRYEVAQVESLRHRQRVEHLERELKELQDSLNAEREKAQVTAK
TLAQHDALMKKTDSMNVLVETNKMLREERERLEQELQQTQAKVRKLEADIMPLQESNAEL
SEKSGMLQAEKKLLEEDIKRWKTRTQHLLSQQKDADPEEYKKLHSEKEAHLKRIQQLTEE
TGKLKTEIARLHASVSTAQSQVSSLRENLGKVSTEKETLHKDLEAKALDIQEKAKTITQV
KKIGRRYKTQYEELKAQHDKLVAEAAAKPIIEQEAQQASAQEIQDLKNALGQAETKVKEL
EGQVEHLQKLASEREVEVKSVQEQIGKLQPELSRLRQDLQEKSAQEDQLRQQMTEKEEKT
KKAFMGAKQKINQLIGAKEQLSKENDELKQHREEQEVRMSALKSQYEGRICRLERELRDQ
QERHHEPRDEPPETPSKAQEQQRQAEQRQISLKTTPASVDRGSASSSEPPTANIKPTPLV
PTPSKAAAIPGNKSTPRASIRPMITPPTTTPTATVMPTTQVETQEAMQSESPVEHVTVFG
SASGSIRSTSPNVQTALSQPIHTVQQQQNQATAFVQPTQQSLPQIEPASQEPAPAPAPAP
APSPAMVEVVQSTQVDRPSTSTAVFGTVSATPGSLLSKRPREEEDENTTDVTEPVQEETG
DQPLPKKLRIIQRVGPEEEVIAEESTEIEIETPAESQESQEPGQLVIEVYPPLEDSEELV
LQSVPVDMVSPLPEQQNTQDSQEEKQHDVIVIDTDSDTEEEENDEEGEQEYEEDEDEEDE
DDTGMGDEGEESNEGSGSADGNEAYEGDDTEQGAEATDPGTENEESLGATEMSQRVADSQ
DSGEGSSSTTETPFSSEPPREPLQPAQNSTDRPAPRHPQSPRRHPHPLPPRLTIQAPAQE
LGPPPQRIPIRRQSVGRGLQLTPGIGGMQHFFDDDDRMVPSTPTLVVPHRTDGFAEAIHS
PQVAGVPRFRFGPLDDMPHAGSSHSDLGQLASQGGLGMYETPLFLAAHEEESGGRSVPTT
PLQVAAPVNVFAEGHPSDVSEHASQSVPMVPTSTGNLSTASEAGQGDEGDEVFMEAEPER
ASAVEALLELENQSEAEESGQPSGDADLPSTSQDLPSSSSADTSSNQPKPFRLVNRQPQS
GKTETRGRQITRQRGVSHAVGSRGRYNRGNMS
NT seq
7119 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtactgcaacagatactggagcgtactgagctcaacaaactacccaaacct
gtccaaaacaagctggagaagttcctttcggaccagcaatcagaaatagatgcactcaaa
gcccgtcacgagcgttttaaagtagatagtgagcaacaatactttgaggttgagaagcga
ctggctcagagtcaggataagcttgtgtctgaatctcaggaccgtcatagcctacaagag
gagctcaataagcacaatgaggaattgaaggctctgaaagtgaggattaaagaatatgaa
gcggcacaagagagtttttcatcaaaacagagtcaacttattagaactaaggatgagctg
gaggctgaaaaacgggaattggtcagaaaacttgagaaaagttcccaggagggggaacat
tttggtgaggacctgagacgcttgaatacaaaacttgtggaaacaaatactgcaaagatg
gaactccagttgaaacttgatgaacttcagtcttcagaggtttcgatcaagtaccgtgaa
aaacgattggagcaggagaaggagctgtttcagagccagaacacctggctaaatgctgag
ctgtccgccaagactgatgagctgctttctgtctcccgtgagaaaggaaatgaaatcctg
gagcttaaatgcaacctggagaacaaaaaggatgaggttaccagactggaagagcaagtg
agcaccctaaaagcatccaatgagaacttccggaatcaagtagaggacctgatgggcaaa
ttgaaagatgcaaaggaacagcaggccggcatggaagaaaggttccgcaatgaactcaac
gctcatataaaactttccaatctttataagagctcagcagcagattctgagtccaaggct
ggtgagctaaccagggcagtggaggaactccacaagctgctaaaggaggctgaagaagcc
atcaaagtgactgaacgacagcagacagaaatggaggcctccaaagaaagcatggaagca
gagctaaaagaaaagattgtcaatatggagaaagagctggacaatgctaatgacctgctc
tctgcttttaagcggaaaggtgtggctgcacttacagaggaggagttgacaacgatgtct
cccactgcagcagctgtagcaaaaatagtaaaacctggaatgaagttgacagagctctat
aatgcctatgtggaaactcaggatcagttgctgttggaaaaactggagatcaaacgtgtt
aacaagtacctggatgagattgtacaggaggttgaggccaaggctcctatcctgaaacgc
cagcgtgaggaatatgagcgcatgcagaagtctgttgccagtctttctgctaaactagag
caggctatgaaggaaattcacagactccagaaagatactgatgaggccaacaagcgttcc
tcagtgctagagagggacaaccaaagatctgagctccagctgactgacatgtctcaacag
attagagttttgctgattgagctggaggaggcaagagggaaccatgtgatccgcgatgat
gttggtgaagaggtgagctctgcagacatcagcagttcctctgaagtcatatctcggcgc
cttgtcacctaccgcaatattgaggaactgcagcagcagaaccagcgcctcctagtggca
ttgcgagaacttggagaggcacaggagaaggaagagcaagaaaccacatcttcaaaggtt
gcagagctgcagttgaacttggagaaagctctaagtgagctggaacgacttcgggacggc
cgcaatcaccagatgcagctggtggagtccatcgtacgccagcgagatatgtaccgcatc
ctgctggcacagaccacaggagtctccttccctatgcagagtgtttcagaggagatcgct
ctgacctccactcctcgacgctctcctggagttactccaacagtgtccactccagctcaa
atgtccacattacagtcaactgagttggtcgaagccagggcagcacttaaacagctacaa
gaagtgttttcaatggacaagaaggagaaagctgaaaatgataaaatcctcaatgaacat
agtgagaagctgcaagagcaagtcactgaactgcgttctcagaacacaaaaatatccacc
cagttggagtttgcttccaagcgttatgagatgctgcaggataatgtcgatggataccga
cgtgagattgcatcaatgagggagaagtgtcaaaaactgtccaccactacccagaaacag
gagcagatcatccacaccatgacccaggatctccgtgctgtcaatgagaagctggctgta
gccgaggtcagaggtgaaaacatgagaaaggaaagggatatgctgaagatggtggagtca
aggctttatcaagagaaggaatctattcttgcagaacagagggggcagaacctgctgtta
actaacctccagtccattcaggtgacgctggatcgctctgagacagagaccaaacagcga
cttaacaaccagattgagaaacaagagagggagattatccagctaaaaaagaaactggaa
tatgaggtggagcagagacacttacttggcagaaaccaggatttgcagctgctagaagct
aagaagcagcttgaaacacaaggagccatgcatctcaaaaccaaggagctgctgaaaaat
gcagagaaggagattgctacactgagacagcagatcagcaatgctgaatcccagctagca
tcacaggtgtcacaaggagctggcgctaaaggaccccagggtgcagagaaggaccttgag
gatcttcgcactcgcctcaggcagacagaggaacagaacaatgatctgagggagcgcctg
aaaacctcgaccagcaatgttgagcagtacaggtccatggtgcttagtctggaggagtct
ctgaacaaggagaaacaggtaaccgatgaagctcgcaccactattgaggctcgtctgaag
gagtctcgcgagtatcaagtgcagctggagaagaaactggttgaagcagagaaggaaaaa
caggacctgcgggaggagaagcgcaaagccattgtgaatctggaggagcagatgtctgag
ctgaagaaaaacctgaccaacatccaggcagagctccaggatgcccttcagagggcagct
gtagcctcttcacatgagcagaaggccacccaggacagccagctgcaggctaagctagct
gcggagtcccagaataagtatgagcgtgagctgatgctgcatgctgctgatgtggaggcc
ctccaagcagctaagaagcaggtgtctcagacctcccagatgcggcaagagctggaggag
aaagcacagagagcccaggcacaacttctggagggcaaggtatcctgggaggagcaagaa
aggatgctgaaggatgaggtgtccaagctggcatctcgttgtgaggatctacagaagcag
aacagtctgctacatgaacaggtagaaagcctaggcaataagatggtggcctctgtacag
caagttacccaggagagcaatatgaacatctccctgagtgaggaaggaaaatcccacgaa
cagatcctcgagattcttaggtttgtccgccgggagaaggagatttcagagaccaggtac
gaagtggctcaggtggagagtttgcgtcaccgccagcgagttgagcacctggaaagggaa
cttaaggagctgcaggacagtctgaatgcagagcgagagaaagcacaggtaacagctaag
actctagctcagcacgatgcgctcatgaagaagacagattccatgaacgtccttgtggag
actaacaagatgctgcgggaggagagggagaggttggagcaggaacttcagcagacgcag
gctaaagtgcgcaagctggaggcagatataatgccactacaggaatccaatgcagagctg
agtgaaaaaagcgggatgcttcaggctgagaagaagctgctggaagaggatattaaacgc
tggaaaactcgcacacagcatctgctaagccaacagaaagatgctgatcctgaagagtac
aagaagctccattctgagaaggaggcccacctgaagcgcattcaacagctgactgaagaa
actggcaaactgaagactgaaattgcaaggttgcatgcatctgtgtccacagcacagagt
caagtcagtagtctgagggagaatcttggtaaggtctctactgaaaaagagacactacat
aaggatctagaggctaaagcactggatatccaggagaaggcaaagaccatcacgcaggtg
aagaagattggccgcaggtacaagactcagtatgaagagctcaaagcacagcatgacaag
ttggtcgctgaagctgctgctaagcccatcattgagcaggaggcccagcaggcatctgcc
caagaaattcaggatctaaaaaatgctcttggccaagcggagactaaggtcaaggagctg
gagggacaggttgaacatttgcagaagctggctagcgagcgtgaggtggaggtgaagagc
gtccaggagcagatcggcaaactgcagccagagctgagccgactgcgccaggaccttcag
gagaaatccgcccaggaggatcagctgcgccagcaaatgacagagaaagaggagaagacc
aagaaggcattcatgggggcaaagcaaaagataaatcagcttattggtgccaaggagcag
ctgtcaaaagagaacgatgagctgaagcagcacagggaggagcaggaggtgcgaatgagt
gccctgaagtcccagtatgaaggcaggatctgccgtctggagagagagctgcgtgatcag
caggagaggcaccatgagccaagggatgagcccccggaaacgcctagcaaggctcaagaa
cagcaaagacaagctgagcagagacaaatctcactaaaaaccacacctgcctccgttgat
agggggagtgctagctcttcagagccacctacagccaacattaagccaactcctctggtt
ccaacgcctagcaaagctgctgccattcctggtaacaagtccactccaagagcaagcatc
cgtccaatgatcaccccaccaaccaccactcccacagccaccgtcatgccaacaactcag
gtggagacccaggaagccatgcagtctgaaagcccagtggaacatgtcactgtgtttggc
agtgccagtggatcaattcgctctacaagccccaatgttcagactgccctgtcccagccc
attcatacggtgcagcaacaacagaatcaagccacagccttcgtacagcccacccagcag
agcctgccacagatcgagcctgccagtcaggagccagccccagccccagccccagcccca
gccccctcccccgccatggtggaggtagtgcagagcacccaagtcgacaggccttccacc
tccactgctgtttttggcacagtttcagctacacccggctctttgttgtccaagcgtcct
cgtgaagaggaagatgaaaacacaactgatgtcacagagccagtgcaggaggaaactggt
gatcaacctcttccaaagaagctgcgaatcattcagagagttggccctgaggaggaagtc
atagcagaggagagcactgaaattgaaatagaaactccagcagaaagccaggaatcccaa
gaacctggacagctggttattgaagtgtaccctcccctagaggacagtgaggagcttgta
cttcagtctgttcctgtggacatggtctcaccccttccagagcagcagaacacccaagac
tctcaggaggaaaagcagcatgatgtcattgtgatcgacacagacagcgacacagaggag
gaagagaatgacgaggaaggagagcaggagtacgaggaggacgaagatgaggaggatgaa
gatgacactgggatgggagatgaaggggaggagagcaatgaaggaagtgggagtgcagat
gggaacgaggcttacgaaggagatgacactgagcagggtgctgaagcgacagaccctggc
acagagaatgaggagagtctaggagcgaccgagatgagtcaaagagtggcagattcacag
gacagcggtgaaggaagcagcagtaccacagaaacccccttctctagtgagccacccaga
gagccactgcagccagctcagaacagcactgacagaccagcccctcggcaccctcagtcg
ccacggagacatccgcacccgcttcctcccaggctgaccatccaggctccggcccaggag
ctaggaccacccccacagcgcattcctatccgtcgccagtctgtaggcagagggcttcag
ctgacacccgggattggtggcatgcaacactttttcgatgacgatgatagaatggtacct
agcacaccaacactggtcgtgcctcatcgcacagatggctttgctgaagctattcactct
ccccaggttgctggagttcccagattcaggttcggtccacttgatgacatgccccatgca
ggctccagccactcggaccttgggcagctggcatcacaaggaggtctaggaatgtacgaa
actcccctgttccttgcagcacatgaagaggagtctggtggacggagtgttccaaccaca
ccactgcaggttgccgcgccagttaatgtctttgctgaaggccacccctctgacgtctcg
gagcatgcttctcagtcggtgccgatggtccccacgtcgacgggaaacctgtccaccgcc
agcgaggctgggcaaggagatgaaggagatgaagtgttcatggaagcagagcctgagagg
gctagtgcagtagaagctttactagaattggagaaccagtctgaagcagaggagtcaggt
cagccatccggtgatgcagatctcccctccacaagccaggaccttccctccagctcttca
gccgacaccagcagcaaccagcccaaacctttcaggctggtgaatcggcagcctcagtca
gggaaaacagaaacccggggacgtcaaataacccgccagagaggtgtaagccatgcggtg
ggtagtagaggccggtataatagaggaaatatgagttaa
DBGET
integrated database retrieval system
