Acipenser ruthenus (sterlet): 117405368
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Entry
117405368 CDS
T07327
Name
(RefSeq) nucleoporin p58/p45-like isoform X1
KO
K14307
nucleoporin p58/p45
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117405368
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arut03019
]
117405368
Messenger RNA biogenesis [BR:
arut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117405368
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
MIC19_MIC25
PSY3
PBC
FapA
TBCA
Motif
Other DBs
NCBI-GeneID:
117405368
NCBI-ProteinID:
XP_034778720
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All DBs
Position
8:1565316..1583017
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AA seq
607 aa
AA seq
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MSGFNFGAGAGGLSSTVSAGGGFGAFGAGAGASSNPAGTGGFTLGNMASVAPTIGAGTTT
TTTSSLGLGGGLFGQTKPATGFSFGGAPTGTAATSTVTGLTLGAPATTAAATTGFSLGFS
KPAASAGPFSLPTAGGGLSLGSTLTSAMPAGSTGFSLSLGSTPASSTALTGLSLGSSGLG
SSLFASSAATGLGQGFGQGLGQSSLGLGLTLAAPAATTSQGLGGVDFTNSSEKKSDKSSG
ARPEDSKALKDENLPPVICQDVDNFQKFVKEQKQVQEEISRMSSKAMQKVQDDIKSLKQL
LSVSASGLQRNSQAIDKLKIETAQELKNAEISLRTQKIPPGLQHENTAPSDYFRVLVAQF
EVQLQLYRQQIEELENHLTAQASSSHITPQDLSLALQKLYQTFVALAAQLQSAHENVKIL
KHQYLDYRKVILEDSTDVFESKRAATKKYRAAPRVTTGPTPFSSIPNAAAIAMAATLTQQ
QQPATGAQPSLGASFGAPFGSGMSTGLQSSGLGSTSLGAFGSAPGFGSGAAGSSTFGFGS
ASKPSGSLSAGFGSSGTTSGFNFSTPGITASAGLMFGVSNPPAAGFGTGGQLLQLKKPPV
GNKRGKR
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgtctgggtttaacttcggcgccggagctggagggttgagttctacagtctcggctgga
ggagggtttggcgcatttggagctggcgccggtgcttcaagtaaccctgctggcacaggg
ggcttcaccctgggcaacatggcctctgtggctccgacgatcggtgctggcaccaccacc
accaccacctcatccctgggacttggaggcggactctttgggcaaacaaaacctgccact
ggcttctccttcgggggagcccccactggaaccgcagcaacatcgactgtgacagggctg
acactgggggcacctgcaaccacggctgcggctacaacaggcttcagtttagggtttagt
aaaccagccgcctccgccggccccttcagtcttcccaccgcgggagggggcctctctttg
gggtccacactgacgtcggcaatgccagcaggttcgactgggttttcgctcagcctgggc
agcaccccggcttcatctacagcattaacaggcctgtcgctgggttcttcagggttaggg
tcaagtctgtttgcaagctctgcagccacaggtctcggacagggttttggacaaggtctc
gggcagagctctctgggcttgggcttgactttagcagctcctgcagctactaccagccag
ggtcttggaggagttgatttcactaactcttcggagaaaaagagtgacaaatcatcagga
gccagaccagaggatagtaaagcgcttaaggatgaaaacctacctcctgtcatctgccaa
gatgtagacaattttcaaaagtttgtgaaggagcagaaacaggttcaggaggagatcagc
cgcatgtcctccaaggcaatgcagaaagtgcaggatgatattaagagtctgaagcagctg
ctgtctgtgtctgccagtggcctgcagagaaactcccaggccattgataagctgaagatt
gaaacggcacaggaactcaaaaacgcagaaatttccttacggacgcagaagatccctcct
ggtctgcagcatgaaaacaccgccccatctgactacttccgggtgctggttgcgcagttt
gaagtgcagttgcagctctatcgacagcagatagaggaactggagaaccacctgaccgcc
caggccagcagctcgcacatcacgcctcaagacctgtctctagccttgcagaaactctac
cagacctttgtggctctagctgctcagctgcagtctgcacatgaaaacgtgaagatcctg
aaacatcaatacctggactaccggaaagtgatcctggaagactccacagatgtgttcgag
tccaaacgggctgctaccaagaagtatcgggccgccccgcgtgtcaccactggccccacc
cctttcagcagtatacccaatgcagcagccattgccatggctgcaacactaacccagcag
caacagcctgctacaggagcacagccgtctctgggggctagtttcggagcgcccttcggc
tcaggtatgagcactggcttgcagtcaagtggcttgggctctacaagccttggagcgttt
ggcagcgcccctggctttggaagtggtgctgcaggaagctccacctttggatttggatct
gcaagcaagccctctggaagtcttagtgcaggctttggcagctctggcacaacttcaggg
ttcaacttcagcacccccggcatcacggcgtcggccggcctgatgttcggggtgtccaac
ccccctgccgcagggttcgggacaggggggcagctgctgcagctcaagaaaccccccgtg
ggaaacaagaggggcaaaagataa
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