Acipenser ruthenus (sterlet): 117405460
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Entry
117405460 CDS
T07327
Name
(RefSeq) putative ATP-dependent RNA helicase an3 isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
117405460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arut03019
]
117405460
03041 Spliceosome [BR:
arut03041
]
117405460
03036 Chromosome and associated proteins [BR:
arut03036
]
117405460
Enzymes [BR:
arut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117405460
Messenger RNA biogenesis [BR:
arut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
117405460
mRNA cycle factors
Common to processing body (P body) and stress granule
117405460
Spliceosome [BR:
arut03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
117405460
Chromosome and associated proteins [BR:
arut03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
117405460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DUF4318
Motif
Other DBs
NCBI-GeneID:
117405460
NCBI-ProteinID:
XP_033864418
LinkDB
All DBs
Position
9:14257378..14289143
Genome browser
AA seq
749 aa
AA seq
DB search
MSHVAVENALGLDQQLAGLDLNSAADGQGGGVSGRRYIPPHLRNKEASKNAGNAYTSGRY
SGYSLPTVRSYSPGWDNGQGNNGFVNGYHDDRDSRMNGGNSFGGRGGSTRGDRGGRGGYR
GNRGGGSFNQSQPIQNTGFAYDKDNSVWNKDQRDPYTSFGGRNDRGKSSFYSDRGTGSRG
RYDRGGFSSRDGGGSSRWVEDNSRDEDWSKPLSPNERVEQELFSGGNTGINFEKYDDIPV
EATGSNCPPHIESFQDVEMGEIIMGNINLTSYTRPTPVQKYAIPIIKSRRDLMACAQTGS
GKTAAFLLPVLSQIYTEGPGEALQAAKANPQENGKYGRRKQYPLALILAPTRELALQIYD
EARKFAYRSKVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLEYCKYL
VLDEADRMLDMGFEPQIRRIVEQDAMPPKGIRHTMMFSATFPKEIQILARDFLEEYIFLA
VGRVGSTSENITQKVVWVEEGDKRSFLLDLLNATVIPSEVQENASEISDKPGKDSLTLVF
VETKKGADALEDFLYREGYACTSIHGDRSQRDREEALLQFRSGRCPILVATAVAARGLDI
SNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKNSNITKDLLDILVEAKQEV
PSWLESLAYEHQHKSTGRGRSKRFSGGFGARDYRQTSNTANSFGSRGSRPGGGHGGNRGF
GGGGGGFGNFYSSDGYGGNYNSQVDWWGN
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggccgtcgaaaatgcacttggtctagatcagcagcttgctggcctagac
ttgaactccgctgctgacggacagggaggtggagtgtcaggcagacgttacattccaccc
catttaaggaacaaagaggcttctaagaatgcaggaaatgcttatacttctggtagatac
agcggttattcactccccacagtaaggagctattctcctggctgggacaatggacaagga
aacaatggctttgtgaatggatatcatgatgatagggattctaggatgaatggtggcaac
agctttggaggaagaggaggatccacacgaggtgacagaggtgggcgtggagggtatcgt
ggcaacagaggtggtggctcctttaaccagtcccaaccaattcagaatacaggcttcgca
tatgataaagataactctgtatggaacaaagaccagagggacccctacactagctttgga
gggcgtaacgatagaggaaagtcctctttctatagtgaccgtggaactgggtcaagagga
aggtatgaccgtggaggatttagctcccgggacggtggcggaagcagccgatgggttgag
gacaattcccgtgacgaagattggtcaaaaccgctgtcacctaatgaacgtgtggaacaa
gagcttttctctggaggcaacacgggaattaactttgaaaagtatgatgacattcccgtt
gaggccactggctccaattgccctccacatattgaaagtttccaagatgtggaaatggga
gaaatcattatgggtaacataaatttaaccagttacactcgacctactccagtgcagaaa
tatgctattccaataatcaaatcaaggagggacttgatggcttgtgctcagacaggctct
gggaaaactgcagcgtttttacttccagttctcagccaaatctacactgaaggtccagga
gaggctttacaagcggcaaaagccaacccccaggaaaatggaaaatatggacgccgtaaa
cagtatccactcgctttgattctggccccaacccgagaactggcactccagatctatgat
gaagcaagaaagtttgcctaccgttccaaagtacgtccatgtgtagtatatggtggggct
gacatcggacagcaaattcgtgacctggaaagaggctgtcatctcctggtagctactcct
ggccgtcttgtagacatgatggagaggggaaagattggtctggaatattgcaagtatctg
gtgctggatgaagcagacagaatgcttgacatgggttttgaacctcaaattcgtcgcatt
gttgagcaagacgccatgcctccaaaaggaatccgtcacaccatgatgttcagtgctact
ttccctaaagaaatccagatccttgctcgtgactttctggaagagtacattttcttggct
gtgggccgtgttgggtccacctccgagaacatcacccagaaagttgtttgggtagaagag
ggagataagcgttccttcctgcttgatctgctgaatgctacagtaattccgagtgaggtt
caggaaaacgcaagtgaaatctccgacaaacctggcaaggactccttgactctggtattt
gtggaaaccaagaaaggtgcagatgcccttgaggacttcttgtaccgtgaaggctatgct
tgcaccagtatccatggagaccgttcacagagagacagagaggaagctcttctccagttc
cgttcaggaaggtgcccaattttggtggccacagctgtggcagctcgtggcttggacatt
tctaatgtgaaacatgtgattaactttgatcttccaagtgacattgaagaatatgtccat
cgcattggccgtactggccgtgtaggaaaccttggtctggcaacctcatttttcaatgag
aagaacagtaacattaccaaggacctccttgatattctagttgaagccaaacaggaggtt
ccctcctggctggagagcctggcttacgagcaccagcacaagagcactggacgtgggcgt
tccaagaggttttctggtggatttggcgcaagagactatcgtcagaccagcaatactgcc
aacagctttggcagccgtggaagccgtcctgggggaggtcacggtggaaacagaggattt
ggtggtggtggtggtggctttggaaacttttacagcagtgacggttatggaggaaactac
aactcccaggttgactggtggggaaactga
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