Acipenser ruthenus (sterlet): 117405462
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Entry
117405462 CDS
T07327
Name
(RefSeq) LOW QUALITY PROTEIN: roundabout homolog 1-like
KO
K06753
roundabout, axon guidance receptor 1
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
arut04515
]
117405462
Cell adhesion molecules [BR:
arut04515
]
Immunoglobulin superfamily
ROBO family
117405462
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
C2-set_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_J_second
Big_4
Motif
Other DBs
NCBI-GeneID:
117405462
NCBI-ProteinID:
XP_034778662
LinkDB
All DBs
Position
8:18463990..18513141
Genome browser
AA seq
1378 aa
AA seq
DB search
MHDGHWCNLAHFDGWFMLNGLINFGAVLRDDFRQNPSDVMVAAGEPAVMECLPPRGHPEP
TISWKKDGVPIDDRDERITIRGGKLMITNARKNDAGKYVCVGTNMVGERDSEIAELTVLE
RPNFVKRPSSQSVLVDESVEFRCEARGDPVPAVRWRKEDGDLPKGRFEIRDDHTLKIRRV
TGADVGSYSCIAENMVGKTEASATLTVHVVSVPPQFVIRPRDQVVAVGRTVTFQCEATGN
PQPAIFWQREGSENLLFSYQPPQPSSRFSVSQTGDLTITNAERSDVGYYGCQALNVAGSV
ITKALLEVTDVVSDRPPPVIKQGPVNQTVAVDGTIVLNCLATGTPPPTILWRKDGGLVST
HDSRVKQQETGALQIRYAKLGDTGMYTCIASTPSGEATWRAYLEVQEFGVPVQPARPTDP
NLIPSAPSKPEVTDVSRAMVTLSWQPNLNSGATPTSYIIEAFSHASGSSWQTVAEHVKTE
TYTLKGLKPSAVYLFLVRAVNAYGLSDPSPIADPVKTQDIPPTSQGVDHKQIQRELGDVI
IHLHNPTILSSSSVKIQWTVEQQTQYIQGYKILYRSNSDGQGKSDWSVFEVKTPAEDNTV
IPQLKKGVPYEFKARPFFNEFQGADSEVKYAKTFEEAPSAPPQSVTVTKNDDNGTAILVS
WQPPPEEYQNGVVQEYKIWCLGNESRYPHINKTVDGSTFSVVIPSFVPGIRYSVEVAAST
DAGLGVKSESRFIQLADCIANYNNQLDSKQTNLMVPDSGVYGDVDLSNKINEMKTFNSPN
LKDGRFINPAGQPTPYATTQLIQSSIGNNINSGNTEMNEKHWKPSIQQKQDLPALHYNIM
EQNKLNKDYRVTDTSMPATIPYNQSHDQSTAGSYNSSDRGSNTSGSQGHKKSRTPKIAKQ
TTMNWADLLPPPPANPPPCRSNEEYTISMEESYDPEMQCPVPPSRMYLQDELEEDDEEDD
EEEEIERGPTPPIRGAASSPAAVSYSHQSTATLTPSPLEELQPMLQECQEEMAHTQHQHD
RRRYPVSPPPPPRPISPPHTYGYISGPLVSDMDTDAPDEDADEADVEVARMHTRRLLLRG
LEQTPASSVGDLESSVTGSMINGWGSASEEDNASSGRSSAVSSSDGSFFTDADFAQAVAA
AAEYAGLKVAKYSMPDAARGRRHYMNPNSHRPTSPVSTDSNMSAAVIQKTRPAKKQKHPP
GHLRKDVYTEDLPPPPLPPPAIKSPTHLTKSLLEGRPMMSSKLASAEQRGDRSAERRGGN
YPRQHSDGRTSSTECRESQERQRESKSRGSRAARQEGTPGKARQHPGPEDILPYNRPTFP
TAHNPRDPSSSSSMSSRGSGGRRRADQTSAGRRNPSDAGLQGLGTFEQEEDELEGAES
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atgcatgacggccattggtgtaacttggcacactttgatggttggttcatgttgaatggc
ctgattaattttggtgcagtcttgcgtgatgatttcagacagaacccttcggatgtgatg
gtagcagctggtgaacctgcagtaatggagtgcctgcctcctcgtgggcaccctgaaccg
accatttcctggaaaaaagacggagttccaatagacgacagagatgaaagaattacaatc
agaggaggaaaacttatgatcacaaatgcccggaagaacgatgctggcaaatatgtgtgt
gttgggaccaatatggtgggcgagcgagacagtgaaattgctgagctcactgttctagag
cgtcctaactttgtgaaaaggcctagcagccagtctgtgcttgtggatgagagcgtggaa
tttcggtgcgaggccagaggggacccggtgcctgcagtgagatggcgtaaggaagatgga
gacttaccgaaaggaaggtttgaaattcgtgacgatcacaccttgaagatacggcgggtg
acaggagctgatgtggggtcgtattcctgcattgcagaaaacatggtgggaaaaactgaa
gcttctgccactttgacggtgcacgttgtatctgtccctcctcagtttgtgatacggcca
cgagaccaggttgtcgcagtggggcggaccgtaactttccaatgcgaggcaactgggaac
ccgcagcctgccattttctggcaaagagaaggtagtgagaatcttctcttctcatatcaa
cctccccagccgtccagtcgattttccgtctctcaaaccggagatttaaccatcaccaat
gcggagaggtctgatgttggctactatggctgccaagctcttaatgttgctgggagcgtt
atcaccaaagctcttctggaagttacagatgttgtatcagacagacctcctcctgttatt
aaacagggccctgtgaaccagactgtggctgtggatggtactatagtgctcaactgtttg
gctactggcactccacctcccaccatcttgtggaggaaagatggggggcttgtctctacc
catgattcccgtgtcaaacagcaggagacgggagccctccaaatccgatatgccaagttg
ggtgacacaggcatgtacacctgcattgcttccactccaagtggagaagctacatggaga
gcctaccttgaagttcaagaatttggggttccagtacagccagcaagacccacagacccg
aatttaattccaagtgcaccttcaaaacctgaggtaactgatgtcagccgggctatggta
acgctgtcatggcaaccaaacttaaattcaggagccaccccaacttcttacatcattgag
gctttcagccatgcatctgggagcagctggcaaactgtagccgagcatgtgaagacagag
acatacactttgaaaggattgaaacccagtgctgtatatctctttcttgtgagagctgta
aatgcttatggacttagtgatccaagtccaatagctgatccagttaaaactcaagatatt
ccacctacaagtcagggagtggatcacaaacaaatccaaagggagctaggggatgtcatt
atccatctccacaaccccaccatcctgtcttcctcctcggtcaagattcagtggacagtg
gaacagcaaactcagtatatccagggatataaaatcctgtacagatccaattcagatggt
caggggaaatcagactggtctgtctttgaagtgaagaccccggctgaggacaacactgtc
atccctcagctgaagaaaggagtcccctatgagttcaaagcccgccctttcttcaatgag
tttcagggggctgacagtgaggtgaaatatgcaaaaacctttgaagaagctcccagtgct
cctccccagagtgtaacagtaacaaagaatgatgacaatgggacagctatcctggtctcc
tggcaaccgcccccagaggagtaccaaaatggagtagtgcaggagtacaagatctggtgc
cttggaaatgaaagccgctacccacacataaacaaaactgtggatggctcgactttctct
gtggtcatccctagctttgtcccaggaatccgatacagtgtggaagtagcagctagtact
gatgcagggctgggtgtgaagagcgagtcgaggtttatccaactcgctgattgtattgca
aattacaacaaccagctggatagcaaacagaccaacctgatggtgcctgactctggagtc
tatggagatgtggacctgagcaacaaaatcaatgaaatgaagacattcaacagccccaac
ctgaaggacgggcgctttatcaacccagcaggacagccaacgccttatgccacgacccag
ttaatccaatccagcattggaaacaacatcaacagtggcaatacggaaatgaacgagaaa
cactggaagccatccatccagcaaaagcaggatctcccggccttgcactacaacatcatg
gaacaaaataaattaaataaagattatcgtgttactgacacaagtatgcccgccacgatc
ccttacaaccagtcgcatgatcagagcacagctggctcgtacaacagttcagatagaggc
agcaacacttcagggagtcaaggtcacaagaaatcccgaactccaaaaattgcaaaacag
actacgatgaactgggcagacttgcttcctccacctcctgccaacccaccgccatgtaga
agcaatgaagagtacactatttcaatggaagagagctatgacccagaaatgcagtgccct
gtgcccccatccagaatgtacctgcaggacgagcttgaggaagatgatgaggaggacgac
gaagaggaggagattgagaggggtcccactccacctatcaggggggctgcctcatcccca
gcagccgtgtcctacagccaccagtcaactgccacactcaccccctccccactagaggag
ctgcagcccatgctacaggaatgccaggaggaaatggcccacacacagcaccagcatgac
aggaggcgctatccagtcagccctccacctcctccaaggcccatctctccaccacacaca
tacggttacatatctggacccctagtatcagatatggacacagatgcccccgacgaagat
gcagacgaggcagatgttgaggtcgccaggatgcacacaaggagattgctgctgcgaggg
ttggagcagactcctgcctccagcgtgggagacctggagagctctgtaacaggctccatg
atcaacggttggggatcagcctctgaggaagacaacgcttctagcgggaggtccagtgcc
gtcagttcttcggacggctcattcttcaccgacgcagactttgctcaggcagtcgcagct
gcagcagagtatgctggcctcaaagtagccaaatattcaatgccggatgctgctagaggc
cgcagacactatatgaaccccaacagtcatagacccacgagtcctgtctctacagacagc
aacatgagtgctgctgtcattcagaaaacacgacctgccaaaaaacagaagcacccacct
gggcatctgcgtaaagatgtttacacagaagacctgccccctcccccattgcctccccct
gctattaagtcccccacccacctgacaaaatctctattggaagggcgtcctatgatgtca
tccaaactggcatctgcagagcaaaggggcgaccggtcagcagagaggagaggtggaaac
taccccagacagcactcagatgggcgtacaagctcaacagaatgcagagagtcccaggaa
cggcagagggaaagcaaatcacgaggaagcagggcggcaaggcaagagggcacgccaggc
aaggctcgtcagcacccaggccctgaggatatcctgccatacaacaggcccacatttcca
acagcacacaatcccagagatcccagttcctccagttccatgtcatcaaggggttctggg
gggagacgacgagcggatcagactagtgcaggacgaaggaatccttcagatgccggattg
caaggattgggaacctttgagcaagaagaagatgagctagagggagcagaaagctga
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