Acipenser ruthenus (sterlet): 117405536
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Entry
117405536 CDS
T07327
Name
(RefSeq) protocadherin-20-like
KO
K16498
protocadherin delta 1
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
117405536
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
arut01009
]
117405536
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
arut04515
]
117405536
Protein phosphatases and associated proteins [BR:
arut01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117405536
Cell adhesion molecules [BR:
arut04515
]
Cadherins
Protocadherins
117405536
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
LYRIC
DUF3924
LST1
Motif
Other DBs
NCBI-GeneID:
117405536
NCBI-ProteinID:
XP_033864543
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All DBs
Position
9:5102559..5106253
Genome browser
AA seq
889 aa
AA seq
DB search
MFHRRAFSAQGILQGLFILLLFIGPFNCFSSYSQANEIIYTINEGLPKGTLIGTIAADLK
LDFSADPPLSFNLASKKISGQYVNLNNTTGELYAAAVEIDREALCPENSDNQACILSFDI
LILPQQYFRLVKVKIIVKDVNDNSPRFPVSEIQVFVPENAQINSRFAIEHSAVDPDIGIH
GVQTYWLGNDYGVFTLDVEENENGDLTPFLIVIGSLDRESKDEYVTDIIAEDGGTPQHLG
TATLKIIITDVNDNCPVFTESQINVTIYGNAANGAHVTRVHAFDSDLGSNAQISYAYSER
VLQTSKALFNLDTNSGIIKISGIMDGNTAQRHRLTVLANGLGCIPAVTVVIVNIIKVFFN
PPVMVPRYIASVVDGTVYLKESEPSYSPIAFFTIKDLDQNQKVDCHLEGHGPFRLSTYKT
FINEYLLETTETLDYELKQNYELTVVAKNSQGLLVKTVINVQLIDENDNPPVFKQSLVDL
LLEENNAPNTFLTKLHATDEDSGEKGQVLYILGSDAPSVFTLDKVSGVLMVTTSLDREEK
EEYRFTVRAVDCGSPRMESIATVIITVLDRNDNSPRFINKDFSFFVPENVPGFGEIGVIS
VSDADSGKNGLVALSIVNGSDIFVIDTGKGVLRVKVPLDREQNSSYLIWIEAVDGGEPAL
SSSTMITVLLLDVNDNPPLVLFPQSNLSYMLVLPTTLPGSSITEVYAVDKDTGMNAVIAY
SIIGRKGPRPESFEIDPGTGNITLQKTLKQNDCGLYRLLVKVSDHGQPEPLHSTIMVNLY
VNETLSNESFIESLLRKEPDITVEQVPPERLAEPAKRKLDQFPCFPVLIALSAACLGLLL
VVILMSACICLRKQKKHKYKERRLEVEIPLNTNKDFQANEKKMMEISNI
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgttccatagaagagccttcagcgcacaaggaatattgcaggggttattcattcttctg
ctgttcatcggacctttcaactgcttttcaagttacagccaagccaacgaaatcatttat
acaataaatgaaggattacccaagggaacactaataggaaccattgcagcagatttaaag
ttggatttctctgctgatccccctctttcattcaatctggcgtcaaagaagatcagtggt
cagtatgtgaacctaaataacactacaggggaactgtacgcagctgccgtcgaaattgac
agagaagcactttgtccagaaaattctgacaatcaagcttgtatcttatcttttgacatt
ctcatcctaccacagcaatatttcagattggtgaaagttaaaatcatagtaaaagatgtc
aatgacaattcacccagatttcctgtttctgagattcaggtttttgttccagaaaatgcc
cagatcaactcaagatttgcaatcgagcactctgctgtcgaccctgacattggaattcat
ggagtacagacttattggctgggtaacgattatggagtatttaccctggatgtggaagaa
aatgaaaatggtgacctgacacccttcttgattgtgataggttcccttgacagagaaagc
aaggatgaatatgtaactgatataatagcagaggatgggggaactccacagcatttagga
acagctaccctgaaaataatcataacagatgtgaatgacaattgtcctgtatttactgag
tcccaaattaatgtaacaatatacggaaatgctgccaatggagcccatgttaccagagtt
cacgcctttgattcagatttggggtctaatgcccaaatatcatacgcttacagtgaaagg
gtgctgcagacctccaaggctttatttaatcttgatacaaattcagggatcattaaaatc
agtggtataatggatggtaacactgctcagcgtcacagactaacagtacttgcaaatgga
cttggttgtataccagccgtgacagttgtgatagtgaacataataaaagtatttttcaat
cctccagtcatggtgccacgctatatagcttctgtggtagacggcacagtgtatttgaag
gaatcagagccatcctactcaccaatagcatttttcactataaaggatctagatcaaaac
caaaaggtggattgccacctggaaggtcatggacctttcagattatcaacttacaagacg
tttattaatgaatatttgttagagactacagagactttggactatgagttaaaacaaaac
tatgaattgacagtagttgctaagaactcccagggtcttcttgtaaaaaccgtcattaat
gtgcaactaatagatgagaatgataaccctccagtttttaagcagtctttggttgattta
ttactggaagaaaacaacgctcctaatacattcctgacaaaactacatgcgacagatgaa
gacagtggagaaaaaggtcaagtgttgtatattctagggtctgatgctccttcagttttc
acattggacaaagtttctggagttcttatggttaccacatctctggacagagaagaaaag
gaagagtacagatttacagttagagctgtggattgcggctcaccacgcatggaatccata
gctactgtaatcatcacagtgcttgacaggaatgataacagcccacgatttatcaacaag
gatttcagcttttttgtaccagagaatgttccaggttttggagaaattggagttatctcg
gtgagcgatgctgattcaggaaagaatgggttggtcgctctatctattgttaatggcagc
gacatttttgtcattgacacagggaaaggggtattaagggtcaaagtgcctttggataga
gaacaaaacagttcttacttgatttggatagaggctgtagacggtggagagcctgccctc
tcatctagcactatgattacagttttgcttttggacgtcaacgacaatccacctttggtt
ttgtttcctcagtcaaatctgtcttatatgctggtgctaccaacaactcttccaggctcc
tccataacagaagtttatgcagtagacaaagacacaggaatgaatgcagtgatagcctac
agcatcattggaagaaaggggcctcggcccgagtcatttgaaatcgaccctggtacaggt
aacatcactttgcagaaaacactgaagcagaatgattgtggcttgtacagactactggtt
aaagtcagtgatcatggacaaccagagcctcttcattcaacaattatggttaacttatat
gtcaatgaaacattaagcaatgagagctttatagaaagtttactgagaaaagaacctgac
atcactgtagagcaagtgccaccagaacgattggcagagcctgccaagagaaagttagac
cagtttccctgttttcctgtattaatagcactttctgctgcatgtctggggcttctgtta
gtagtgattctaatgtctgcctgcatctgcttaaggaaacaaaagaagcacaaatataaa
gaaagaagattggaagtagagataccgttaaatacaaacaaggatttccaggcaaatgaa
aaaaagatgatggagatttccaatatatga
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