Acipenser ruthenus (sterlet): 117405672
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Entry
117405672 CDS
T07327
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arut04131
]
117405672
Membrane trafficking [BR:
arut04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
117405672
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
117405672
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WDR55
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
WD40
WD40_Prp19
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
EIF3I
Lgl_C
Beta-prop_WDR19_1st
Synaptobrevin
Beta-prop_NUP159_NUP214
RAB3GAP2_N
CFAP43_N
Motif
Other DBs
NCBI-GeneID:
117405672
NCBI-ProteinID:
XP_033864783
LinkDB
All DBs
Position
9:21863957..22048706
Genome browser
AA seq
1263 aa
AA seq
DB search
MKKFNFRKVLDGLTASSPGSASGTSTCPGGTTGVPAVGVAPKETEVQETLASENFQICKT
VRHGFPYQPTALAFDPVQKIVAIGTRTGGVRILGRPGVDCYCQHDSEAAVLQLQFPINEG
ALVTACADDTLHLWNLRQKRPAILHSLKFNRERITFCHIPFQSKWLYVGTERGNTHVVNI
ESFILSGYIIMWNKAIELATKTHPGPVVHLSDSPRDEGKMLIGFESGTVVLWDLRAKKPD
FRFYYDEAIHSVSWHHEGKQFMCSHSDGSLTMWNLKNTAKPFQITFPHAKSQRDGKKPDP
CKPILKVEYKTSRSSEPFIIFSGGLSYDKAGRRPSLTIMHGKSITVLEMDHPIVEFLTLC
ETPYPNEFQEPYAVVVLLEKDFIVVDLTQSHFPIFENPYPMDIHESPVTCTAYFADCPPE
LIPALYSVGAKHKKQGYSNKEWPVSGGTWTLGAQTYPEIIITGHADGSIKFWDGSAITLE
MLYKLKTSKVFEKQKVGEGKQVAEIVEEDPYAIQMISWCPESRILCVTGISAHVILYRFS
KHEATTEIVSLEVRLQNDVEDIITPEATENISPYTEPSQPITGSPSNVSPEGIKDSIPCL
KVKSRPVRMPQGYQAELVIQLVWVDGEPPQQIASLAVNSAYGLVAFGNSNGLAVVDFIQK
TVLLSMGTIDLYGSSDPYLRQLRSPRRSKQLPADTFCMRGLSNIYSDSKKRIRTSHQSLS
ELSDSPVSLELERCKSPTSVPPPTTSHNDPRTFPDTPANVKASHCSPVFYLLDNVKGPRK
LSLPTDLKTDLDNVNGHCTSPTSQPCSTGKRVSATEGAKLNRWGPSRPPFRKAQSAACME
ISLPASHTEVGYASRRAMLQQLHGISIYSQDEHHSASYTWSEKESRDNSFSRSRSSSVSS
IDKESKETITALYFMDSYGRKNDGTLSPCLWVGTSLGVVLVISLNLPSGEEQRQSEPVMV
APSGTVLMLKGAVLTFSSVDCAGGLIHPPYEVWRDPNSMDDNEKPRKRKLVTFSPSSSQD
MGDYHFAVICSEKQAKVYSLPSQNCLYAHSITESSFVLRADVVTVCNSVCLACFCANGHI
MTLSLPSLRPMLDVNYLPLTDMRIARTFCFTNGGQALFLSSPTEVQRITFSQEMCENLQD
MLGELFTPVETPEAQNRGFLKGLFGGSGQTFDREELFGEAAAGKASRSLAQHIPGPGSME
GMKAAAGGVVGDLARARIALDERGQRLGELEDRTAAMMGSAESFSKHAHELMLKCKDKKW
YQL
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttaattttcgaaaggttttagatggcttgactgcctcctccccaggcagc
gctagcggaacttcaacatgcccaggtgggaccactggtgtccctgcagtaggagtggct
cccaaggaaacagaagttcaagaaaccctcgcttcggaaaactttcagatctgtaagacg
gtacgtcatggcttcccatatcagcccactgccttggctttcgacccagtgcaaaaaatt
gtggccattggaacaagaacaggaggtgtacgaatattgggcagacctggcgtcgattgc
tattgtcaacatgacagcgaagcagctgttctacagctccagtttccaatcaatgagggt
gctcttgtcactgcatgtgctgatgacactcttcacctctggaacctgcgacaaaaacgt
ccagcaatcctccattcactcaaattcaacagagagcggattaccttctgccatattcca
ttccaaagtaaatggctgtatgtgggtacagagagaggaaatacacatgtagtaaatatc
gagtccttcatcctctcaggatacatcatcatgtggaacaaggcgatagaactagcaaca
aagacccaccctggccctgtggtgcacttaagtgacagtcctagggatgagggaaagatg
ctgataggctttgaaagtggaacagtagtgttatgggacctccgagcaaaaaaaccagac
ttcagattttactatgatgaggccattcattctgtaagctggcatcatgaaggcaaacag
ttcatgtgcagccattccgacggcagtctgaccatgtggaatctgaaaaacactgccaaa
cctttccagatcacctttccacatgcaaaaagccagagagatggaaagaaaccagaccca
tgcaaaccaatcttgaaagtggaatacaagacatcaaggagcagtgagccatttattatc
ttctctggagggctgtcgtatgataaagcaggtcgaagacctagtttgacaatcatgcat
ggtaaatctatcacagtgctggaaatggatcaccccatagtggaattcttaacactttgt
gaaactccctatccaaacgaattccaggagccttatgcagtagttgtgctgcttgaaaag
gactttatcgttgtggacctaacacaaagccactttcctatctttgaaaacccatatcct
atggatattcatgaatccccagttacctgcacagcatactttgctgactgccctccagag
ctaatccctgctctttactctgtaggtgccaaacacaaaaagcaaggctacagcaataaa
gaatggccagtcagtggtgggacctggacactgggagcacagacatatcctgaaattatt
attacagggcatgctgatggatcaataaagttttgggatggatctgccataacccttgag
atgctgtacaagctgaaaacatccaaggtgtttgaaaagcagaaggtgggagaggggaag
caggtagcggagattgtggaagaggacccatatgccatacagatgatcagctggtgtcct
gaaagcaggatcctatgtgtcacaggcatctcagctcatgtcatactttacagattcagt
aaacacgaggctactactgaaatagtgtcactagaggttcggcttcagaatgatgtggag
gacattatcactccagaggcgactgagaatatctctccatacacagagccttcccagccc
attacaggaagccccagcaatgtctctccagagggaataaaggacagcatcccctgcctc
aaggtgaagtctcgcccagtaagaatgccccaaggctaccaggcagaactggtaatacag
ctggtgtgggtagatggagagcctccccaacaaatagcaagcctggctgtgaactcagcc
tatggcttggttgcatttgggaattccaatggcctagctgtggtggatttcatccagaag
acagttctgctcagcatgggaaccattgacctttacggttccagtgacccatacctgcga
cagcttcgctctccacgcagaagcaagcagctcccagcagacaccttttgcatgcgcggc
ctgtctaacatttattcagattcaaagaaaaggattcgtacatcccaccagagtctatct
gagctgtctgacagccctgtttccttggagctagaacgctgcaagtctcccacatcagtt
cctcccccaaccacatctcataatgatccccgcacctttccagacaccccagcaaatgtg
aaagcaagccactgcagcccagttttttacttgctggacaatgttaaaggaccaagaaag
ttaagtctgccgacagatcttaagactgatcttgataatgtaaatggacattgcactagc
cccacctcacagccctgcagcactgggaagcgcgtctctgccactgaaggtgctaaactg
aaccgctggggtcctagccgaccccctttccgaaaagcacagtctgctgcttgcatggag
atctctttgcctgcctcccacacagaagtaggttacgcatcaagacgggcaatgcttcag
caattacatggaatcagtatttactcgcaagatgaacaccactctgccagttacacatgg
agtgagaaagaaagccgggacaattccttcagccgctcccgtagctccagtgtgtccagc
attgacaaggaatccaaggaaaccataacagcactgtacttcatggactcgtatgggcgt
aagaacgatgggactctctcgccatgtctttgggtcgggaccagcctaggggtggtactg
gtcatctctttaaacctgccctctggtgaggaacagaggcaaagtgaaccagtcatggtg
gctcccagcgggaccgtgttgatgcttaaaggagcagtgctgacgttttcatctgttgac
tgtgccggtgggctgatccaccctccctacgaggtgtggagggacccgaacagcatggat
gacaatgagaaacctcgcaagcgtaaacttgtaaccttctcgccctcctcttctcaggat
atgggggattaccattttgcagtcatctgttcggagaaacaggccaaagtctactcactg
ccttcccaaaactgcctttacgcgcatagcatcacagagtcgtcgtttgtgctaagggca
gatgttgttacagtttgtaatagtgtctgcctggcttgcttctgtgcaaatggacatatc
atgacactaagcttgcctagccttcgaccaatgctggatgtaaactatctacctttgaca
gacatgaggattgctcgaactttctgctttacaaatggagggcaggcgctgttcctgagc
tctcctacggaggttcagcgcattaccttcagccaggagatgtgtgaaaacctgcaggac
atgttgggagagttgtttacaccagtggaaaccccagaggctcaaaacagaggatttcta
aaaggactctttggaggaagtggacagacatttgacagggaagaactctttggggaggca
gctgcaggaaaggcctcgcggagtcttgctcagcatattcctggccctgggagcatggag
gggatgaaggctgctgctggaggggtagttggagatctggcacgggcccgtatcgctttg
gatgagagagggcagagactgggagaactggaggatcgcacagcagccatgatggggagc
gcagagtcattttccaaacacgcacatgagctgatgctaaaatgcaaggacaagaagtgg
tatcagttgtaa
DBGET
integrated database retrieval system
