KEGG   Acipenser ruthenus (sterlet): 117405692
Entry
117405692         CDS       T07327                                 
Name
(RefSeq) splicing factor 3B subunit 1-like isoform X1
  KO
K12828  splicing factor 3B subunit 1
Organism
arut  Acipenser ruthenus (sterlet)
Pathway
arut03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:arut00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117405692
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:arut03041]
    117405692
   03036 Chromosome and associated proteins [BR:arut03036]
    117405692
Spliceosome [BR:arut03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    117405692
 Complex B
    117405692
 Complex C
   U2 SnRNP specific factors
    117405692
Chromosome and associated proteins [BR:arut03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    117405692
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N HEAT_ECM29 Htt_N-HEAT_1 HEAT_2 XMAP215_CLASP_TOG Adaptin_N UNC45-central DUF2298 T4_baseplate
Other DBs
NCBI-GeneID: 117405692
NCBI-ProteinID: XP_033864855
LinkDB
Position
10:complement(45585753..45604608)
AA seq 1352 aa
MRTVVSLRQSGSRESLAFWIDSLLNKMAKIAKTHEDIEAQILEIQEKKAALLEGSEEGDG
GVGLDSTGYYDQEIYGGSDSRFAGYVTSIAANEQEDDDEEDSSTSLLGQKKPGYHAPVAL
LNDIPQSAEQYDPFAEHRPQKIAEREDEYKGRRRQMIISPERLDPFADGGKTPDPKLHAR
TYMDVMREQHLTKEEKEIRQQMAEKAKAGELKVVNGSAASQAAAAAAAAKRKRRWDQTAD
QTPNSASTTPKKVSSWDQADVTSEQTPGHTPGHTPSESRWDETPGRAKGSETPGATPSSR
MWDPTPSHTPAGAATPGRGDTPGHVTPGHGGATSSVRKNRWDETPKTERETPGHGSGWAE
TPRTDRGGDSVEETPTPGASKRKSRWDETPASQMGSSTPLLTPGKTPIGTPAMNMATPTP
GHLMSMTPEQLQAWRWEREIDERNRPLTDDELDAMFPEGYKVLPPPAGYVPIRTPARKLT
ATPTPMGGMTGFHMQTEDRTMKTINDQPSGNLPFLKPDDIQYFDKLLVEVDESTLSPEEQ
KERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMSPTLEDQERHLL
VKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMIST
MRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQARHTGIKIVQQIA
ILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIAALAEAATPYGIESFDSVLKPLW
KGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSPDEEMKKIVLKVV
KQCCGTDGVEANYIKTEILPAFFKHFWQHRMALDRRNYRQLVDTTVELANKVGAAEIISR
IVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQLIDGILYAFQEQTTEDSVMLN
GFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQAADLISRTAVVMKTCQEEKLMG
HLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIKDLLPRLTPILKNRHEKVQ
ENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPHD
VLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLS
FLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGVYGFGCEDSLNHLL
NYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHPARKVRDVYWKIYNSI
YIGSQDALIAHYPRVYNDEKNPFVRYELEYSL
NT seq 4059 nt   +upstreamnt  +downstreamnt
atgcgcacagttgtctccctccgacaaagcggaagtcgtgagagcttggccttctggata
gattcactgctgaacaaaatggcgaagatcgccaagacacacgaagacattgaggctcag
atccttgagatacaggagaagaaggcagctcttctggagggctctgaggaaggagatgga
ggagtgggactcgactccactggctactatgaccaggagatctacgggggcagcgacagc
cgcttcgctggctatgtcacctccattgctgccaatgagcaggaagatgatgacgaggaa
gactcctccaccagcttgctggggcagaagaagcctgggtaccacgctcctgtggcactg
ctcaacgatatcccacagtcagcagagcagtatgatccgtttgcggagcaccgtccccag
aagatcgccgagcgggaggacgagtacaaaggtcgccgacggcaaatgatcatctctccc
gagcgtctcgacccctttgcagacggagggaaaaccccagatcccaaactccatgccaga
acgtacatggacgtcatgcgtgagcagcacctcacaaaggaagagaaagagatccgtcag
cagatggcggagaaggcgaaggcaggggagctgaaggtggtgaacggctctgctgcatcc
caggctgctgctgcagctgctgccgcgaaacgcaagcgccggtgggaccagactgcggac
cagacccccaacagtgccagcaccacgcccaagaaggtgtccagctgggaccaggcagac
gtcacctcggagcaaactccgggacacacaccgggacacacaccctctgagagccgctgg
gatgaaacccctggccgagcgaagggcagtgagacccctggagccacccccagctcccgc
atgtgggaccccacccccagccacacccctgcaggagcggccacacccggcagaggagac
acacctggccacgtcacaccaggccacgggggagccacctctagtgtgcgcaaaaaccgc
tgggatgagacacccaagacagagagagagacccctggccatggcagcggctgggctgag
accccccgtacagaccgtggtggtgactctgtggaagagactcccaccccaggggccagc
aagaggaagtcgcgctgggacgagacccccgcgagccagatgggctcctccacccccctg
cttaccccgggaaagacccccataggaacccctgccatgaatatggccactcccacgcca
ggtcacctgatgagcatgacccccgagcagctgcaggcctggcgctgggagcgtgagata
gatgagaggaaccggccgctcaccgacgatgagctcgatgccatgttccctgaggggtac
aaggtcctgccccctccagcgggctacgttccaatccgcaccccggcccgcaagctcacg
gccacccccacccctatgggaggaatgaccgggttccacatgcagacagaggaccgcacc
atgaagaccatcaacgaccagccctccggcaacctgcccttcctcaagccagacgacatc
cagtacttcgacaagctgctggtggaggtggatgagtcgactctcagtccagaggagcag
aaagaacggaagatcatgaaactgctgctgaaaatcaagaacggcactccgccaatgaga
aaggccgcgctccgtcagataacagataaagcccgtgagtttggggctggcccgctcttc
aatcagattctgcccctgctgatgtcccccacgctggaagatcaggagcgccatcttctg
gtgaaggtcattgacaggatcctgtacaagctggatgacctggtccggccctatgtgcac
aagattctcgtggttattgaacccttgttgattgatgaagattactacgccagagtggag
ggcagagaaatcatctccaatttggccaaggctgctggtctggccaccatgatctcaacc
atgcgccccgacattgacaacatggatgagtatgtgaggaacacgacggcccgtgccttc
gctgtggtggcctcggcgctggggatcccctcgctgctccccttcctcaaggccgtgtgc
aagagcaagaagtcctggcaggccaggcacactggcatcaagatcgtgcagcagatcgcc
atcctcatgggctgtgccatcctgccccatctcaggagcctggtggagatcattgagcac
ggtctggtggatgagcagcagaaggtgcgcactatcagtgctctggctatcgctgccctg
gctgaggcagccaccccctacggtatcgagtccttcgactccgtgctcaagcccctgtgg
aagggtattcggcagcacagaggcaagggtctggctgctttcctgaaggctatcggctac
ctgatccccctgatggacgccgagtatgccaactactacaccagggaggtgatgctgatc
ctcatcagagagttccagtctcccgatgaggagatgaagaaaattgtgctcaaggtggtg
aagcagtgctgtggcacagacggtgtggaagcaaattacatcaagacagagatcctgccg
gcctttttcaaacacttttggcagcacaggatggcgctggacaggaggaactacagacag
ctggtggacaccacggtggagctggctaacaaggtgggcgctgcggagatcatttctcgc
attgtggacgacctgaaggacgaggcggagcagtaccgcaagatggttatggagaccatt
gagaagatcatgggcaaccttggggcagctgacatcgaccacaaactggaggagcagctt
atcgatggcatcctgtacgccttccaggagcagactactgaggactccgtgatgctgaac
ggctttggcacagtggtgaacgcgcttgggaagcgtgtgaagccctacctgccccagatt
tgcggtaccgtcctgtggcgtctcaacaataagtctgctaaagtgcgccagcaagccgcg
gatctcatttccagaaccgccgtcgtcatgaagacctgccaggaggaaaagctgatgggt
cacttgggtgtggtgctgtacgagtacctgggagaggagtaccccgaagtgctggggagc
attcttggggcgctcaaggccattgtaaacgttatcggtatgcacaagatgactcccccg
atcaaggacctgctgcccagattgacgcccatcctgaagaacagacacgagaaggtccag
gagaactgcatcgacttggtcgggcgaattgctgaccggggagctgagtacgtctcagcc
agggagtggatgaggatttgctttgagctgctggagctgttgaaggctcacaagaaagcc
atcaggagagccactgtcaacaccttcggttacatcgccaaggccatcggccctcacgac
gtgctggccactctgctcaataacctgaaggtccaggagcgacagaaccgtgtgtgcacc
accgtggccatcgctatcgtggcggagacatgctcccccttcactgtgctgccggcgctc
atgaacgagtaccgcgtgcctgagctcaacgtgcagaacggcgtgctcaagtccctctcc
ttcctctttgagtacatcggggagatgggcaaggactacatctacgcagtcacgccactg
ctggaggacgcgctcatggacagagacctggtgcacaggcagacagccagtgcggtggtg
cagcacatgtctctgggtgtgtacgggtttggctgtgaggactccctcaatcacctgctc
aactacgtctggcccaacgtgttcgagacctcgccccacgtcatccaggctgtcatgggg
gcactggaggggctgcgcgtcgccatcgggccctgccgcatgctgcagtactgcctacag
ggcttgttccacccagcgaggaaggtgagggatgtttactggaagatctacaactccatc
tacatcggctcccaggatgctctgatcgcacactacccccgcgtgtacaacgacgagaag
aaccccttcgtccgctacgagcttgagtactccttgtaa

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