Acipenser ruthenus (sterlet): 117405703
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Entry
117405703 CDS
T07327
Name
(RefSeq) brother of CDO
KO
K20020
brother of CDO
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
117405703
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
arut04515
]
117405703
Cell adhesion molecules [BR:
arut04515
]
Immunoglobulin superfamily
Other
117405703
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
FN3_DSCAM-DSCAML_C
V-set
Ig_VEGFR-1-like_5th
Pur_ac_phosph_N
C2-set_2
Ig_SEMA-3_4_7A
Fn3_ROS1
Ig_5
Ig_C17orf99
Ig_4
ISET-FN3_linker
Ig_PDGFR_d4
Fn3_VIN3
Fn3_PBP1
DUF7359
SCY_4732_
Motif
Other DBs
NCBI-GeneID:
117405703
NCBI-ProteinID:
XP_034778681
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Position
8
Genome browser
AA seq
1068 aa
AA seq
DB search
MMKDMFLMDGSRTGLWKNLSFVAWLLVTALGFLVSAADELPTFTVQPMSAVQKLGGPVTL
RCRVEPPTANVSWRLNGHELRDSNASLEVLIQPEALIIPALSNLTIGRYQCIARTAIGAS
ASVSATVTAAKLRDFEADDQHEIEVDEGNTAVIECHLPESHPKAQVRYSVKQEWLETSKG
NYLIMPSGNLQIVNATQEDEGTYKCAAYNPVTQEVKTSSSSDRLRIRRSTSEAARIIYPL
GAQSIIVTKGQSLVLECVASGIPPPQVTWSKDGAGLHQQNKTRFLLSNLLIDATSEADSG
TYSCQADNGVGEIGAAYIFYSVQVLEPPEVSLELQQQFVPWGQNARFSCSIRGNPLPSVV
WLRNAAPLSQSQRHRLTKRVLRVLNVGPQDDGIYQCMAENEVGSSQGAARLITVPAEKLP
TQIIKPVNPDKILRDKASQKPRPTLPVVPIKCPVDAGKVSPAEAPIILSLPRTTKSDSYE
LLWKPRDGGSPVLEYIVKHRKATDSTDDWTVTSIPGNLHRLTLVKLDPSSLYEVEMATKN
CAGLGQAAMMTFRTGRSSGPEKILNDDPCSSSQNPSPSDNACLSPPEAPDRPTISMANET
SVYVTWIPRGNRGFPIQSFCVEYKKLKGGDWTRATSNIPPSRLSVQISQLEKGDSYKFRV
RAVNILGESRPSTPSKPYVVSSSHRVPVAGPIAGPHITYTEAINETTIMLKWMYTSSFNN
NTPIHGFYIYYRPTDSDNDGDYKKDVVEGDRHWHSIVHLMPETSYDIKMKCFNEGGESKY
SNVMICETKARRYPRTTARPVSRHPNAGHREVPAVARSSDLPYLIVGVVLGAIVFIIVAF
IPFCLWRAWAKQKQTSDLAFPAASLPVSSCQYTMVPLRGLAVPNGHCAADRATIALNGGH
HPLSRNDYTTSGKHLNYCLGGLHQGEMECNSLLQENMMCNGRPAAYRYSERLPEHDHEEN
SFLPDDSTHQLLNTGNHQASSVCHVTGSEAPCCRIEGAREINMNGGPPCIAVLTPVEVES
PETLRSLSNCSTQQPQDSPGPEVTQEEVIFSPNTTKEQSGQLQSNDKE
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaggacatgttcctgatggatgggagcaggacggggttgtggaagaacttatct
tttgttgcttggcttcttgtaacggccctggggtttctggtgtctgctgctgacgagctg
cccacattcacagtgcaacccatgtctgcagtccaaaagctgggtggtccggtcacactg
aggtgccgagtcgagccccctactgccaacgtgagctggaggctgaatggacatgagctg
agagactccaacgccagcctagaggtgctgatccagccggaggctctcatcatcccggcc
ctgagcaacctgaccattggccgctaccagtgcatcgctaggactgcgataggagccagc
gcaagtgtttctgccacagtcactgctgccaagctgcgggatttcgaggcagatgaccag
catgagatcgaggtggacgaggggaacaccgctgtcatcgagtgtcaccttcctgagagc
caccctaaggctcaggtccgctacagtgtcaagcaggagtggctggagacttccaaaggg
aactacctaatcatgccgtccggaaacctccagattgtcaacgccactcaggaggacgag
ggaacctacaagtgtgcggcctacaaccctgtgacccaggaagtgaaaacatcctcctcc
tcagacaggctgcgcatcagacgctccacatcggaggccgctcgcattatctaccccctg
ggagctcagtccatcattgtgacgaaggggcagagcctggtgctggagtgtgtggcgagt
ggcatcccccctccgcaggtgacctggtctaaagacggggcaggtctccaccagcagaac
aagacccgctttcttctgagcaacctgctgatcgacgccaccagcgaggcagactcgggc
acctacagctgccaggctgacaatggcgtcggggagatcggcgccgcctatatattctac
agcgtgcaagtgctcgagcccccggaggtgagcctggagctgcagcagcagtttgtgccc
tggggtcagaatgctcgcttcagctgtagtatccgagggaacccgctgccctcagtggtc
tggcttcgcaacgcagcgcccctctcccagtcgcagcgccaccgcctgaccaaacgtgtt
ctacgtgtcttgaatgtgggaccgcaggacgatggcatctaccagtgcatggctgagaac
gaggtggggagctcgcagggtgctgcccgtctcatcacagtcccggccgaaaaactccca
actcaaatcataaagcctgtcaatccagacaaaattctgagggacaaggcctcgcagaag
cctcgcccaacactgccagtcgttcctataaagtgtcctgtagacgcagggaaggtgtcg
cctgctgaagctcccatcatcctcagcttacccaggactacaaaatcggactcttatgag
ttgctatggaaaccaagggatggggggtcacctgtactggagtatattgtcaagcataga
aaggccacagactccactgatgactggactgtaaccagtatcccaggtaacctgcacaga
ctaaccctggtcaagctggacccatccagcctgtacgaggtggaaatggcaacgaaaaac
tgtgcagggctcgggcaggcagccatgatgaccttcaggacaggtcgcagcagcgggcct
gaaaagatcctcaatgatgatccgtgctccagcagccagaaccccagcccatcagataac
gcttgcctgtctcctcccgaggcccctgaccggcccaccatctccatggccaacgagaca
tcggtctatgtgacgtggatcccgcgcggtaaccgtggtttcccaatccagtccttctgc
gttgagtacaagaagctgaagggcggagactggacacgggccaccagcaacatccctccc
tcccggctctctgtccagatctctcaacttgagaaaggcgactcctataagttccgggtg
cgtgcagtgaatatccttggggagagccggcccagcactccctccaagccctatgtggtt
tccagcagtcaccgcgtcccggtcgctgggcctatcgcgggaccccacatcacctacacc
gaggctatcaatgagacaaccatcatgctcaaatggatgtatacatcttcctttaacaac
aacactccaatccacgggttttatatctactaccggccgacagacagcgacaatgacggc
gattacaagaaagacgtggtcgagggtgatcgccactggcactccatcgtccacctcatg
ccagagacctcctacgacatcaagatgaagtgtttcaatgagggcggggaaagcaagtac
agcaacgtcatgatctgcgagaccaaagctcgccggtacccacgtaccacagcccgtccg
gtgtctcgtcatcctaatgcaggccatagagaggtgccagcagtagcacgctccagtgat
cttccctacctcattgtcggcgtggtgttgggtgccatcgtcttcatcattgtggctttc
atcccattctgtctgtggagggcctgggccaaacagaagcaaacgtcagacctggcattc
ccggctgccagcctgccagtgtcctcgtgccagtacaccatggtgcctctccgggggttg
gctgtgcccaatgggcactgtgcagctgacagagccaccatcgcgctcaatgggggtcat
cacccactgtccaggaacgactacactacctctggaaaacacctgaactactgccttggt
gggctgcaccagggtgaaatggaatgcaacagcttgcttcaggagaacatgatgtgcaat
ggcagacccgcagcgtaccgatattctgaacggttgcccgagcatgaccatgaagaaaac
tcatttctcccagacgactccacccaccagcttctcaacactggtaatcaccaggccagc
agtgtgtgccatgtgacagggagtgaggccccatgttgcagaatagagggtgcacgggag
atcaacatgaatggtggccctccgtgcattgctgttttaactccagttgaagttgagagt
cctgaaacactccggtctctgagcaactgctccacacagcagccccaggattcaccaggg
ccggaagtaacccaggaagaagtgatattttcacccaacaccaccaaggagcagagtggg
cagctacagagcaatgacaaggagtaa
DBGET
integrated database retrieval system
