Acipenser ruthenus (sterlet): 117405757
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Entry
117405757 CDS
T07327
Name
(RefSeq) LOW QUALITY PROTEIN: short transient receptor potential channel 2
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
arut04040
]
117405757
Ion channels [BR:
arut04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
117405757
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
XRCC1_N
TRP_2
Ion_trans
Ank_2
PKD_channel
Ank
Motif
Other DBs
NCBI-GeneID:
117405757
NCBI-ProteinID:
XP_034778626
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Position
8:12719510..12744538
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AA seq
1275 aa
AA seq
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MAPVKIKHVVSFSSQDPKHSVDTLLAKEDVRPWLCAPKDHSGLMKVELQLERASAIGYID
IGNCGSAFIQIDVGRSSWPQDQPYMTLLPTATLMSPTESRQGTNRTGVRMFKEGDFLSQG
DGELWDRVRVTCSXPFNKHVQFGLSFLQIRTPLDQNENEVLSDGTETQVSPGQLGASQAR
EWFSSPTIQSTFFGQTQGGCSAETVQARLQRVDPSSCVRFRDRVCLSRSARMVISASQSK
RRPPACPSTDTASCSEGGHLEGTKQTTKQSHTDPESKVADVTPAVATRKRPIKRRCPRGS
AGSRSTQSRTSGAAKRQRTVTDKGTASPPTISGTPELPIEGDVETGVPESCCPICGDRFS
LDYLPVHASSCQGDEFPVPLDVESSYGPTQSPLRSSPEKLPCPLCGFQYPLSEIELHASN
CGELTYPSGIWIEQPKSMENLTQAQWREIMNKKMRFPPTLIVAIQAANVLQVSRLLAVSD
GILRQLDESEDRLWREALNLAIRLGNEDIINVLLECVKFDFRQIHEALLVAVDTNQPTVV
KRLLDRLDHEKGVGNNKVDIRSFSLAIFDHSIDNSHFAPGVTPLTLACQKDLYEIVEMLT
KKGHVIPRPHKVSCTCLECRNGRQYDLLKFSLSRINTFRGIASRAYLSIGSEDAMLSAFR
LSRELKRLSKKEPEFKPQYLSLEDLCQEFAVELLGMCRNQSEVTTILNDCGDDSEEELDQ
QTFEEGIPNLARLRLAVNHNQKRFVAHPICQQVLSSIWCGSLSGWRGSKTAWKIFVSLGI
FITMPVLCLIYWLAPKSKIGKILKIPVIKFLLHSASYLWFLIFLLAESIIMESDREHFST
RNQSILQNSFHMVWVVGFFWHECKEVWIEGMRNYLLDWWNFLDIMTLSMYLASFSLRVLV
ALKGYFYCLDSETTLECVYFTQTGREGWCQEDPQIIAEVLFAVTSMLSFTRMAYILPAHE
SLGTMQICIGKMIDDMMRFMFILMIIGTAFLCGINNIYVNYVVSPRLGQFNETFPFLFWT
MFGSADQSAVDMPEYVVAEFVGRVMYGIFTLVIVIVLLNMLIAMITNSFQKIEDDADVEW
KFARSKLYLCYFREGLTLPVPFNVIPTPKSLFYLLRSIFQKICCCCKTKRLPDYPPIPSI
VSSPKDKDFPMESRVSYRLQVIKALVQRYIKTACREFEESKRKDVGNRITELNKVVGRLH
SEMKQIRKKLTQGTSISGEEEGASILGKYILGAKTNFRTFDQDSLGSEGSVKVTVHQRER
AGTGEELIEGGEEVN
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atggctccagtgaagattaaacacgtggtatcattcagttcccaggaccccaagcatagt
gtggacactctgctggccaaggaggatgtgcggccctggctttgtgcccccaaagatcac
agcggtttaatgaaggttgagctacagctggaaagggccagtgctattggatacattgac
ataggaaactgtgggtctgcgttcatccagattgatgtggggcgctcctcgtggccacag
gaccagccgtacatgactctgctgcccactgccacgctgatgagccctacagagtccaga
cagggcaccaaccgcaccggtgtgcgcatgttcaaggaaggtgatttcctgtctcaaggg
gatggcgagctctgggaccgggttcgagtgacctgcagctagcctttcaacaagcatgtt
cagttcggcctgtccttcctccaaatccgaaccccgctggaccagaacgagaacgaggtg
ctgtctgacggcacagagacccaggtgtctccaggccaactgggagcaagccaggcaaga
gagtggttttccagcccaactatccagagtaccttctttggacaaacacagggtggatgt
tccgcagagacggtccaggctagactgcagcgagtggaccccagttcatgcgtgcggttc
agagacagagtctgtctcagccgatcggcccgcatggtgatttcagcgtcgcagtccaag
agacgcccacctgcatgtccctcaacagacactgcctcctgcagtgagggaggacatctt
gaagggaccaagcaaacaacaaaacaaagccacacagatccagagagtaaggttgctgat
gtcactcctgctgtggcaaccagaaagagaccaatcaagcggaggtgtccccggggctct
gcaggaagcaggtctactcagtccaggacctctggtgccgccaagaggcagaggactgtg
actgacaagggaacagcttcaccccctactatcagtgggaccccagaactcccaattgag
ggtgatgtggagaccggagttcctgaaagctgttgtcccatttgtggagatcgcttcagc
ctggattacctacctgtccatgcctcatcctgtcagggtgatgagtttccagtccccctt
gatgtagaaagcagctacgggcccacgcaaagtccactgcgtagctcccctgagaagttg
ccctgcccactgtgtggcttccaataccccctttctgagattgagctccatgccagcaac
tgcggagaactaacctaccccagtgggatctggatagagcaaccaaagagcatggagaac
ctcacgcaagcgcaatggcgggaaattatgaacaagaagatgcgtttcccgccgactctg
attgtggcaatccaggcagcgaacgtgctgcaggtgtccaggctgctggcagtcagtgac
gggatcctgcggcagctggatgaatcagaggaccgcttgtggagggaggccctgaatctg
gccatccggctgggcaacgaggacataataaatgtcctcctggagtgtgtcaagttcgac
ttccgtcaaatccatgaggccttgctggtggccgtggacaccaaccagcccactgtggtc
aagcgcctcctggacaggctggaccatgagaaaggggttggcaacaacaaggtggacatc
cgttccttctcgctggctatctttgaccactccatcgacaattcacattttgcccccggg
gtcaccccgctcacactggcctgccagaaagacctgtatgagattgtggaaatgctgacc
aagaagggtcacgtcatcccccggccccacaaggtctcctgcacctgcctggagtgccgc
aacgggcgccagtatgacctgctgaagttctcactctcccgcatcaacaccttccggggc
atcgccagccgcgcctacctttccatcggcagcgaggacgccatgctcagcgccttccgc
ctcagccgcgagctcaagaggctctccaagaaggagcccgagttcaagcctcagtacttg
agcttggaggacctgtgccaggagtttgcagtggagctgctgggaatgtgcaggaaccag
agtgaagtgacgacgattctgaacgactgcggagacgacagcgaggaggaactggaccag
cagaccttcgaagagggcatccccaacttggctcggctgagactcgctgtcaatcacaac
cagaaacggtttgtggcccatcccatctgtcagcaagtgctctcgtcgatttggtgcggc
agtctgtctggctggcgcggcagcaagaccgcatggaagatcttcgtctcgcttgggatc
ttcatcaccatgcctgtgctctgtctcatctactggctggctcccaaatccaagatcgga
aagatcctgaagatcccggtgataaagttcctgctacactctgcctcctatctgtggttc
ctgatcttcttgcttgcggagtccatcatcatggagagtgaccgggaacacttctccacg
cgcaaccagagcattcttcagaactccttccacatggtgtgggtggtgggcttcttctgg
catgagtgtaaggaggtgtggattgagggtatgcgcaactacctgctggactggtggaac
ttcctggacatcatgaccctcagcatgtacttggcctccttcagcctgcgcgtgcttgtc
gccctcaagggctacttctactgcctggactccgaaaccacactggagtgcgtctatttc
acacaaaccgggcgagaggggtggtgtcaggaggacccccagatcattgctgaggtactc
tttgctgtgacgagcatgctcagtttcacacggatggcgtacatcctacccgcccacgag
tctctgggaacaatgcagatctgcatcgggaagatgattgacgacatgatgaggttcatg
tttatcctgatgatcattggaacagccttcctctgtggaatcaacaatatatatgtgaac
tacgttgtatccccacgcctaggacagttcaatgagacattcccgttcctgttctggacc
atgtttgggtcagcggaccaaagcgcggtggacatgcctgagtatgtggtggctgagttt
gtggggcgggtgatgtacgggatattcaccctggtgatcgtcatagtactgctcaacatg
ctcatcgccatgatcaccaactccttccagaagatagaggacgacgcggatgtggagtgg
aagtttgcacgctcgaagctttatctctgctatttcagggagggtctcaccctgccggtc
cccttcaacgtcatccccaccccaaagtccttgttctacttgctaaggagcattttccag
aagatctgctgctgttgtaaaaccaagcgattgccggactacccacctattccctcaatt
gtgagttcccccaaagataaggatttccccatggagagtcgtgtgtcatacaggctgcag
gtcatcaaggcgctagtgcagcgatacattaagacagcctgcagggagttcgaggagagc
aagaggaaagatgttggcaatcggattacagagctgaacaaagtggtggggcgactccac
tctgaaatgaagcaaattcgcaagaaactcacccagggcacttccatttccggagaggaa
gagggcgctagcatactgggcaagtacatccttggggccaagaccaacttccggaccttc
gaccaggactccctgggatccgaagggtctgtaaaagtcactgtgcaccagagagagaga
gcggggacgggagaagagttgattgaggggggcgaggaagtgaattag
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