Acipenser ruthenus (sterlet): 117405974
Help
Entry
117405974 CDS
T07327
Name
(RefSeq) remodeling and spacing factor 1 isoform X1
KO
K11657
remodeling and spacing factor 1
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117405974
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
arut03036
]
117405974
Chromosome and associated proteins [BR:
arut03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
117405974
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WHIM1
PHD
DDT
Motif
Other DBs
NCBI-GeneID:
117405974
NCBI-ProteinID:
XP_033865467
LinkDB
All DBs
Position
8:complement(12042160..12071548)
Genome browser
AA seq
1523 aa
AA seq
DB search
MAASAASAGSCPDYCPSFAVVCSFLERYGALLDLPELTFPQLERAFRETTTVPKALVELH
LKLMRKIGKSVSADRWEKYLVKMCQDFNSTWAWELEKKGYQEMTVECKVGILKYLCECQF
DDNLKFKNVINEEDPEAMRLQPIGRDKDGLMYWYQLDQDHNVRVYVEEQDDQEGTSWKCI
VRTRNDLAETVELLKAQIDPALLTKSVQLEGSSSASPSPDDEENKEGAELLPDGIVPFSH
CRDRAISLLGESPDKKVEKMEEDSKEPESKPATESAALSLAPPKSESEDKESSMAENEER
KPNIKEEPKEINIDSVEKKEEKEQTPVKSEEKPIIDNKVRTITAVINEEPKAPENVKSSD
QNVTAPIPDKQEVSIKMEPSEEIKQKSSEEVERALKNDQQAIEPSEEVKEKSSEEVERAL
KNDQQAKIPLKKREIKLTEDFDNGGKIARNPSVTPTKDLLREEGKTEEEVHRPASASEKK
AGEELVNGEVSAAKEPNNRRTQEEPMDTGHPPEKKSQEESQQDKMAAGEGVKEENGLTVS
QRKVSRDPPEVQGKNEKKPDQPKKGGVLEKAEEAVSAAKVSSTLEDCCKQEETTEEPVEA
CKTSTAKSDPVEKPVMSSKEKKEASTKLLKEGVEEPVKDATLHSPEDCSATEKELPSDDK
ENNKEGADEKTDCSPEEMDVSPDKTSITRTPMEEKTNKEDTEEKPENAEAQKSKESEPQQ
GADDSKQDIEAMAEVGNDPEENLNKAEGIADSEVSSEIQTGGIRLKIRIPAGKRRQVTPH
KEGQDSEISHRRSLRRSPRICRPTAKAAEIRDKKTEKKQVVEEDEEDEEDEEEMEKPASQ
RKEKETTKKAEPEAQSRVNKGKSRRQRRARWTISRSRWRKQKGSSKEEEESNDDDSDEDY
KVEKDRDRDEEDSGEEETEAANDDPCKRCGLPNHPELILLCDSCDSGYHTACLRPPLMII
PDGEWFCPPCQHKLLCEKLEEQLLNLDVNLKKRERAERRRERLVYVGISVENIIPASVSS
MDLDTNGAKEPDTEEGKEEKKESKKCKNLERRSTRARKSISYRFDDFDEAIDEAIEEDIK
EAEGGVHACSPNSGAGRGKDMANITGHRGKDISTILQEEGKENRRPPRATAVHRRKRRRL
NDLDCDSTADEDESEDEFRVSDSTEEEEFVVSEEEDVDSDGDPGSNDSDFGLRTRKTARQ
RRVKPKKQSTRLQRRRGRREYSDDDEEEETEEEEEEEEEMETERSSDYSDDDLDMRRRRS
RRSLKKEVNYCETSESEGSRKGRLTEKHRPHRRMLSSSDSEASSHTKDSEEEEEEERKRK
KEDSSEDDSHRRRRLKLKRRKASEEEDEDDDDDDDEEEEQRPVRKRLNRIETDEEDEQEE
VGEEDKEGPQKKKEEEATTRKPPCLSEKAKKPNKIASSDDEEDTVSKGESPLDLNLEDLP
STNGQSLGKGLESLITKPGAGVATGVDCGGAPKSSGATATALRVTSLAPNGTAGQEGPPQ
EEDEDDLLGVTDLVDYVCNSEQL
NT seq
4572 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcggcggcatcggcgggttcttgccccgattattgccccagcttcgccgtg
gtctgctcgttcctggagcgctacggcgcgctgctggatctaccggagctcacattcccg
cagctggagagagcgtttcgggaaaccacgaccgttccaaaagcccttgtggagcttcac
ttaaaattaatgaggaaaatcggcaagtctgtttcagctgacagatgggaaaagtacctt
gtcaagatgtgtcaggacttcaacagcacctgggcctgggagctggagaagaagggttac
caggagatgactgtggagtgtaaagtgggcatcctcaagtacctgtgtgagtgtcagttc
gatgacaacctcaagtttaagaacgtgatcaacgaggaggaccccgaggcgatgcgcctg
cagccgatcgggcgggataaggacggcctgatgtactggtaccagctcgaccaggaccac
aacgtgcgagtctatgtggaggagcaagacgaccaggaagggacctcctggaagtgcatt
gtcagaacccgtaatgatttggcagagactgtggaactcctgaaggctcagatcgacccg
gctctgctcaccaaatcagtgcagctggagggctcctctagcgccagcccctctcctgat
gacgaggagaacaaggagggtgcagagctgctacctgatggtattgtccccttctctcac
tgcagggacagagcaatctcccttttaggtgaatccccagacaagaaggttgagaaaatg
gaggaagattcgaaagaaccagaaagcaagcccgcaactgagtctgctgctctgtctctt
gctcctcctaaaagcgaaagtgaagataaggagtcctctatggctgaaaatgaagagagg
aaacccaacataaaagaggagcccaaggaaatcaacatagattctgtagaaaagaaagaa
gagaaggagcagacgccagttaaatctgaggaaaagcccattatagacaacaaagtcaga
accatcacggcagtgataaacgaagaaccaaaagctcctgaaaatgtcaaaagctctgac
caaaatgtgactgcccctataccagataagcaggaagtatccataaagatggaaccctca
gaggagattaagcagaagtcctctgaagaagtggagcgagccctgaagaatgaccagcag
gccatcgaaccctcagaggaggttaaggagaagtcctctgaagaagtggagcgagccctg
aagaatgaccagcaggccaagatccctctgaagaagcgggagatcaagctgacagaggat
ttcgacaatggtgggaagatcgcccgcaatccatcagtaacccctaccaaggatctgctg
agggaggagggaaagactgaagaggaagtccaccgaccggcttctgcctcagagaaaaag
gcaggagaagagcttgttaatggagaagtctctgcagctaaggaacccaacaatcgcaga
actcaagaagagccgatggacacagggcatcctccggagaagaaaagccaagaggaaagc
caacaggacaaaatggcagcgggagaaggagtgaaggaagagaacggtttgactgtgtcc
caaaggaaggtctccagggacccacctgaggttcaaggaaagaatgagaagaaacctgac
cagcccaagaaaggaggtgtcttggagaaagcagaggaagctgtttccgctgcaaaggtt
tcatcaactcttgaagactgctgtaaacaagaagaaaccacagaggaaccagtggaagca
tgcaagacttccacagcaaagtctgaccctgtggagaaacctgtgatgtcctcaaaggaa
aagaaagaagcatccactaaactgttaaaagaaggagttgaagaacctgtgaaagacgcc
acattgcactctccagaggactgtagtgccacagagaaagaacttccctccgatgacaag
gaaaataataaagagggtgctgatgagaagacagattgcagtcctgaggaaatggatgtc
agtcctgataagacgtctatcaccaggactcctatggaggagaagacaaataaagaggac
acagaggagaaacctgaaaatgcagaggctcagaagagcaaggaaagtgaaccacaacag
ggggcagacgatagcaaacaggacatagaagccatggcagaggttggaaatgacccagaa
gaaaacctcaacaaggctgagggtatagctgacagtgaggtctcgtcggagatccagacg
ggaggtatcagactgaagatcaggatcccggctggtaagaggaggcaggtcaccccccac
aaagaagggcaggattctgagatttcacaccggaggtccctgaggaggtcgcctcggata
tgcaggcccacagccaaggcagcggaaatccgggacaagaagacagagaagaagcaggtg
gtggaagaggatgaggaagatgaggaagatgaggaagaaatggagaaacctgcttcacaa
aggaaagagaaagagaccacaaagaaagcagaacccgaggcacagtccagggtaaacaag
ggtaaatcgcgacggcagcggcgtgcaaggtggacaatctctcggtcacggtggcgcaag
cagaagggctcgagcaaggaagaggaggagagcaatgacgatgacagcgatgaagactac
aaggttgagaaggacagagaccgagatgaggaggattcgggggaggaagagacagaagca
gccaatgacgacccatgcaagcgctgcggcctccccaaccaccctgagctgattctcctg
tgcgactcttgcgacagtggctatcacacagcctgtttacgtcccccattgatgatcatt
cccgatggagaatggttctgtcctccttgtcaacataaactcttgtgtgagaagctggaa
gaacagttgctgaacttggatgtcaatttgaaaaagagggaacgtgcggagagaagacga
gaacgcttggtgtacgttggtatcagcgttgaaaacatcatccctgcttctgtaagtagt
atggacttggatactaatggtgctaaggagccagatacggaagaagggaaggaagaaaag
aaggaatcgaaaaagtgtaagaatttggaaaggaggtctacaagagcaaggaaatctata
agctacaggtttgatgattttgatgaggcaatcgatgaagcaatagaggaagatatcaaa
gaggcagagggtggagtacatgcttgttcccctaactcaggtgcaggcagagggaaggac
atggcaaacatcacggggcaccgggggaaggacatctccaccatcctgcaggaggagggc
aaggagaatcggcggccgccgagagcgacagccgtccacaggaggaaacgcaggcgcctc
aacgacctggactgcgacagcactgcggacgaagatgagagcgaagacgagttcagagtc
agcgacagcacggaggaggaggagtttgttgtgtcggaagaggaggatgtggacagcgac
ggggacccaggctccaatgacagtgactttgggctgcgcactcggaagactgcgcggcag
aggcgtgtcaagcccaaaaagcagagcacaaggctgcaacggaggcgaggccggagagag
tactccgacgatgatgaagaggaggagactgaggaggaggaggaggaggaggaagagatg
gaaacggagcgttcgagtgactacagcgatgatgacctggacatgcgcaggcggcggtcg
cggaggagcctgaagaaggaggtgaactactgcgagacctccgagagcgaagggtcacgg
aagggcagactcacggagaagcacagacctcaccgacgcatgctctccagctctgacagc
gaagcgagttcccataccaaagactcggaggaagaggaagaggaggagaggaaaaggaaa
aaggaagactcctctgaggacgactcgcatcggcggcgacggctgaagctgaaacggagg
aaagcttctgaagaggaggatgaagacgacgatgatgatgatgacgaggaagaagagcag
cgccctgtccgcaagaggctaaaccgcatcgagactgacgaggaggacgagcaagaagag
gtcggggaggaggataaagagggtcctcagaagaagaaggaagaggaggcaacaactagg
aagccaccttgtctgtctgagaaggctaagaaacccaacaaaatagccagcagcgacgac
gaggaagacactgtcagcaaaggggagagccctttggaccttaacctggaggacctgccc
tccactaacggacaaagccttgggaagggcctggagagtttaatcacaaagcccggtgct
ggagtagctactggtgtggattgtggcggggctcccaagagcagtggtgccactgccaca
gccctccgtgtaacaagcctggcaccgaacggcaccgctgggcaggagggtcccccacag
gaagaggatgaagacgaccttttgggtgtgactgaccttgtagattacgtttgtaatagc
gaacagttgtaa
DBGET
integrated database retrieval system
