Acipenser ruthenus (sterlet): 117406034
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Entry
117406034 CDS
T07327
Name
(RefSeq) DNA polymerase alpha catalytic subunit-like isoform X1
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117406034
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
arut03032
]
117406034
Enzymes [BR:
arut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
117406034
DNA replication proteins [BR:
arut03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
117406034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DNA_pol_B_2
MTR4_beta-barrel
DUF1744
Motif
Other DBs
NCBI-GeneID:
117406034
NCBI-ProteinID:
XP_034779899
LinkDB
All DBs
Position
9:complement(54420576..54505993)
Genome browser
AA seq
1483 aa
AA seq
DB search
MAPVSNPDKDIDKQDDDVGDSCGLASTRSRREKREKTGRKSALDRLKKAKAGEKVKYEVE
EISSVYEEVDEEQYSRMVRDRQDDDWIIDDDGTGYVEDGREIFDDDLAEDALDRGPKGKR
GDKGAGSKDKKNVKKVVVSKPNSIKSMFMASSVKKSSEKDIDLSKDDLLGDLLQDLHSEK
PQLLTPPPVISLKKKKPVGVPQNPFSVKLQAPKASPSPTSVKAASVPARLAGSSLRPAHP
VKSTGAPGTKRVKLEEEPQVEEAVGDMQFDEGDFDEPMEVENAEEPATTVSAAVQPVKEE
PQPEPIVKVEPKTEPTDKHSALKSSSIPESSCWELMDPEDSSVSAVEVQVDSSRLPLVMG
AEGEQVFRFYWLDAFEDPYNRPGIVYLFGKVWIESAKAHVSCCVVVKNIERTMYLLPRET
RVNLKTRAETDTPVTMMDVYQEFNEIADRYKIMKFKSKKAVKNYAFEIPDVPAQSEYLEV
RYSADLPPLPQDLKGATFSQVFGTNTTSLEHFLLGRKIKGPCWLDVKTPQLASQPVSWCK
VEAVALKSDLVSVVKDIAAPPLVVLSISMKTVQNPKTHQNEIVSLAALLHNQFPLDRAPP
QPPFETHFCVISKPNDCIYPFDFNEAVKRKNTKVEIASTERTLLGFFLAKLYKIDPDVIV
GHDIYSFDLEVLLQRINACKVPNWSKIGRLRRSVMPKLGGRSGFAEKNATCGRMICDVQI
SAKELIRCKSYHLSELVLHILKSERPVIPQEDIKNLYSDSHRLLYLLESTWMDAKFILQI
MCELNVLPLALQITNIAGNVMSRTLMGGRAERNEYLLLHAFHERDYIVPDKQVFKKVQQD
HVDDDDEGDAGQGKSRKVKKKAAYAGGLVLEPKVGFYDKFILLLDFNSLYPSIIQEFNIC
FTTVQRLAPGSQKTAEGEEQDEIPQIPDPDQDMGILPKEIRKLVERRKQVKQLMKQPDLN
PDLHMQYDIRQKALKLTANSMYGCLGFAFSRFYAKPLAALVTHTGREILMHTKELVQKMN
LEVIYGDTDSIMINTNCANLEEVFKLGNKVKSEVNKLYKLLEIDVDGVFKSLLLLKKKKY
AALTVEPTGDGRYTTKQELKGLDIVRRDWCDLAKEGGNYVIAQILSDQPRDTIVENIQKR
LMEIGESVVNGSTPLNMFEINKALTKDPQDYPDKKSLPHVHVALWINSQGGHKVKAGDTI
SYVICQDGSNLSASQRAYAVEQLQKQEGLSIDTHYYLSQQVHPVVSRICEPIEGIDAILI
ATWLGLDPSQFRSQQQYHRDEESEALLGAPAQLTDEEKYRDCERFKFPCPQCATENIYDS
VFDGSRKVIEPRVMRCSNTNCEAAQINYGVQMSNKLILDIRRHIKKYYSGWLMCEEQTCR
NRTRRLPLGLYRRGPVCQACMKASLRPEYPEKALYTQLCYYRYIFDWDYAVGKQEKECQS
RLNSLEEKVWYKKLKEVADKALSVSGYSEVNLSKLFQSLTCLK
NT seq
4452 nt
NT seq
+upstream
nt +downstream
nt
atggctcctgtttccaacccggataaagacattgacaagcaagacgacgatgttggagac
tcatgtggcctggcatcgactcgctccagacgagagaagagggagaagacggggcgcaag
tcagccctggaccgtctgaagaaagccaaggctggagaaaaagtgaaatacgaggtggag
gagatctccagtgtgtatgaggaggtggatgaggagcagtactcgcggatggtgcgtgac
cggcaggatgatgactggatcattgacgatgatggaactggctatgtggaagatggcagg
gagatctttgatgacgatctcgctgaggatgccctggacagaggacctaaagggaaacgg
ggtgacaaaggtgcgggcagcaaggacaagaaaaatgtgaagaaggtggtggtgtccaaa
cccaacagcatcaagtccatgttcatggccagctcggtgaagaagagctcggagaaagac
attgacttgtctaaggatgacttactgggggacctcctgcaagatctccattctgagaag
ccccagctgctgacgcccccgcctgtcatatctctgaagaagaagaagccagtgggagtg
ccccagaatccgttctctgtgaaactgcaggcccccaaggcttctccatctccaacctcg
gtgaaagcggcctctgttcctgcccgcctggctggctcttctctccggccggctcaccct
gtgaagagcactggagctcccgggacgaagagagtaaagctggaggaagagcctcaggta
gaggaggctgtaggagacatgcagtttgacgagggagactttgatgagccaatggaagtg
gagaatgcagaggagcctgccaccactgtcagtgctgctgttcagccagtgaaggaagag
ccacagcctgagcccatcgtcaaagtggagcccaaaactgagccaaccgacaagcacagt
gctttgaagagctcctcgatccctgagtcctcgtgctgggagctcatggacccggaggac
agcagtgtgagtgccgtggaggtgcaggtggactccagccgcctgcctctcgtcatggga
gccgagggggagcaggtcttcagattctactggctggatgcctttgaggacccctacaat
cggccaggcattgtctatctgtttggtaaagtttggattgagtctgcaaaggcgcacgtc
agctgctgtgtggtagtgaagaatatcgagaggacgatgtatctgttgccacgggagact
agagtaaatcttaaaaccagggcagagacagacaccccagtgaccatgatggatgtgtac
caggaattcaacgagatcgccgacagatacaagatcatgaagttcaagtcgaagaaagcg
gtgaagaactatgcttttgagatcccggatgtccccgcgcagtctgagtatttggaagtg
agatactctgctgacctgcctccgctgccccaggacttgaagggggcgaccttctcccag
gtgttcgggaccaacaccaccagcctagagcacttcctgttgggcaggaagatcaagggg
ccgtgctggctggatgtgaaaactccccagctggccagccagccggtgagctggtgcaaa
gtggaggcggtggcgttgaagagtgatctggtgagcgttgtgaaggacatcgcggccccg
cccctcgtggtcctgagcatcagcatgaagaccgtgcagaatccgaaaacgcatcagaac
gagatcgtgtccctggcagccttgctgcataaccagtttcctctggacagagctcccccg
cagcctcccttcgagacacacttctgtgtgatcagcaagccaaacgactgcatctatccg
ttcgatttcaacgaagctgtgaaaagaaagaacaccaaggtggagattgcttcaacagag
agaacgttactggggtttttcctggcaaaactttacaagatcgaccctgatgttattgtg
ggccatgacatctacagctttgacctggaggttctgctgcaaagaatcaacgcctgcaag
gtgcctaactggtccaagatcgggcgcttgagaagatccgtcatgcccaaacttgggggc
cgcagtggctttgcagagaagaacgctacgtgtgggagaatgatctgcgacgtgcagatc
tcagccaaggagctgatccgctgcaagagctaccacctgtctgagcttgtgctgcacatt
ctcaagagcgagaggcctgtgatcccccaagaagacattaagaatctctatagcgattcc
catcgcctgctgtacctcttggagagcacctggatggatgccaagttcatcctgcaaatc
atgtgtgagctgaacgttctcccgctggccttgcagatcaccaacatcgccgggaacgtc
atgtccaggaccctgatgggtgggcgtgctgaaagaaacgagtatctcttgctgcatgcg
ttccacgagagggattacatcgtaccggacaagcaggtcttcaagaaagtgcagcaggat
cacgttgatgatgatgacgagggggatgcaggccagggcaagtccaggaaggtcaagaag
aaggcagcctacgctggaggtctcgtcctggaacccaaagttggtttctatgacaagttc
atcctgctgctggatttcaacagcttgtacccctccatcatccaggagttcaacatctgc
ttcaccacagtgcagcggcttgccccgggctcccagaaaacagctgagggggaggagcag
gatgagatcccgcagattcccgatccagaccaggacatgggaatcctgcccaaggagatc
cggaagctggtggagaggaggaagcaggtcaagcagctgatgaagcagcccgacctcaac
cctgatctccacatgcagtatgacatcaggcagaaggctctgaagctcactgctaacagc
atgtacggctgcctggggtttgccttcagcagattctatgctaaaccgctggctgccctg
gtcacacatacaggacgagagatcctgatgcacaccaaagagctggtccagaagatgaac
ctggaagtcatatacggagacaccgattccatcatgatcaatactaactgtgctaatctg
gaggaggtttttaaactggggaacaaggttaagagtgaggtgaataagctgtacaagctc
ttggaaatcgacgttgatggggtcttcaagtctctgttgctgctcaagaaaaagaagtac
gcagccctgacagtagagcccacgggggacggcaggtacaccaccaagcaggagctgaag
gggcttgatatcgtcaggagagattggtgcgacctcgccaaggagggtggaaactatgtc
attgctcagatcctttcggatcagccccgagacacgatcgtggagaacatccagaagagg
ctgatggagatcggagagagcgttgtgaacggcagcactcccctcaacatgtttgaaatc
aacaaggccttgacgaaggaccctcaggattaccctgataagaagagcctgccccacgtg
cacgtggccctgtggataaactcacaggggggtcacaaggtgaaagccggggataccatt
tcatacgtcatctgtcaggacggctccaatctgagtgcgagtcagagagcctacgccgtg
gagcagctccagaagcaggagggcctgagcatcgacacgcactactacctgtcccagcag
gtccaccctgtggtgtcccgaatctgtgagcccatcgagggcatcgacgccatcctcatc
gctacgtggctgggtctggacccgtctcagttccgctctcagcagcagtatcatcgggac
gaggagagcgaggccctgctgggggcgccggcgcagctgactgacgaggagaagtaccgc
gactgcgagaggttcaagttcccctgcccgcagtgcgccacagagaatatctacgacagc
gtcttcgacggctcgagaaaagtgattgaacccagggtgatgcgctgcagtaatacaaac
tgcgaagctgcacagataaattatggagttcagatgagcaacaaactaattctggacatc
agacgtcacataaaaaagtattacagtggctggttgatgtgtgaggagcagacctgtcgg
aaccggacccggcgccttcctctcggcctgtatcggagagggcccgtgtgccaggcctgc
atgaaggcctccctccggcccgagtaccctgaaaaagctctctacacccagctctgctat
taccggtatatttttgactgggattatgctgtgggtaaacaagagaaagaatgccagtcg
cgactgaactcgttagaggaaaaggtgtggtacaagaagctgaaggaagtcgctgacaaa
gctctgtcggtgagcggctactccgaggtcaatctcagcaagctcttccagtcgcttacc
tgtctcaagtag
DBGET
integrated database retrieval system
