Acipenser ruthenus (sterlet): 117406160 Help Entry 117406160         CDS       T07327                                  Name (RefSeq) protocadherin-16-like isoform X1   KO K16507   protocadherin-16/23 Organism arut  Acipenser ruthenus (sterlet) Brite KEGG Orthology (KO) [BR:arut00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:arut04515]     117406160 Cell adhesion molecules [BR:arut04515]  Cadherins   Cadherin related    117406160 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Cadherin_CELSR2_9th Cadherin_2 Cadherin_pro Fibulin_C CADH_Y-type_LIR TMEM154 RIFIN GRP LapA_dom EphA2_TM SKG6 FeoB_associated Motif Other DBs NCBI-GeneID:  117406160 NCBI-ProteinID:  XP_033865929 LinkDB All DBs Position 9:36055262..36251549 Genome browser AA seq 3298 aa AA seqDB search MRIGSPLIGLGELAMERLNRRETWNKRVLLLLYVAFRLITGHSSTVLGTLDLQLDEEQPA GTIVGDISAGLPPGTTASLYFITDLESTGVGSDLHIDETTGIIKTAKVLDRETRDRYNFI AVTMQGVTVEVTIVVNDINDHAPSFPKSRATFKIPEQTAIGTRFSLEPASDADKGQLSTQ GYLVKNGNMGQAFRLQTKRGSNEVLYLDLVVNGILDREQVSSYSLYLEAFDGGSPRKTGH MILDVLVQDINDNAPVFNQSRYHTLISENMKPGSTILQVFASDADEGDNGLVIYEINRRQ SDPERYFLIDPHTGIITLSKPLDYEMRKVHELVVQARDNASQPEITNAFVSIHVRDYNDN QPTMTIIFLSEDGSPQISEGAQPGQYVARISVSDPDYSEYANVNVSLEGGDGKFGLTTKD NIIYLICVDKILDREERDSYELSVMATDSGTPPLRAESSFTIQVTDVNDNPPLFDQQVYK QTIPEVVYPGSFVLQVTARDKDQGPNGDVKYSILQDRGTHSDWFTIDPVTGIITTATELD YETDPKPRITVVATDGGRPALSSTAVVNVVLQDINDNEPVFDSNFYNVSIKENTAAGTCF LQVTAKDADGGSFGTIFYSIGSGIGSVVPTQFTIGKETGQICTSLTLDRDQGPSSYDFTV TAVDGGGLNSMAYVKVFLVDINDNSPVFYPVHYAVSLSTQSAPGTSVIKVTAHDQDEGQN GRVTYSTAPGGSSPYFTLNKDTGVISLSRSLHGKANSVIQLVISAQDGGGLTAKFNARVN ISVVAGSVVPPVFEQAHYFFTVSEDVLRGTQVGIVRASSGHGRSEGVSYTISSGDSDGYF TVDSETGALRTSCPLDHEAQPSLELEVQARSGSPPAFGQTQVRITIADINDNAPFFLPSS SESLLLAEATDIGTLVYHVRAEDRDSGPNGQLHFDLLSSGGQRTFGIERSTGDVRLIGGL SYETMPRYDLKVVAKDSGVPQLSTTFTLVVHVQAENDQGPVFDTLTYRVELKEGTPLNTR FLQVRALNRETTTTSSTTGSSSTILAYHLRPDGDAAGFGIAPDSGWLFVKSILDRETKDL YLLTVLATSGTGQLKKTGSATVRISVTDENDNAPRLTQERAFLAVRENLPPGTGFGRVAA TDRDAGLNSRLTFRLLHPDRNFQMNSQTGEISTRTALDREHQSSYQLVVVVQDGGTPPRS ATGTAHITVLDENDNAPAFTHAPPGRELVLQVLEGKPSGTLLGSVQAKDPDEGENGTIYY SLSGTRAERFSLNPNTGELRLAAPLSHTDRADYTFTVTATDRGSSPQSTSAALRIQVLNP SKFLPHPGLPTLTLNSLEGIKPGSVVGSVGSKYLQRHPEEGQVTYTVVGSSDRDGTFVVD RLTGDIYLAQELDYEQGAHYTLQIEVDDFSRAYPTSRIILVDIDVQDSNDHVPQFPEDPV TIVIPENMVAGSSIYTFQAVDKDGSGPNSDIHYSILQQWPTNDENLALDPVTGVMSLGKS LDREVTPSLLLIVQAVDQALNVSQRRSSSVTARIFVTDENDNAPIFSSPTAVSVMEDQPI GFVVLYVMARDSDLGESGRVAYRIQSGNAGGRFNLNPNSGSLSIVKALDREEQGLYNLTI VAEDHGSPQCTTLQLLSVQVIDVNDEAPQFQEVEFEAQISENQHAGTSVLRVTATDCDQG SNGFVTYGGIVEDGFTIDQATGVVTATRALDREVQDRYTVTVYAKDGGLPPNFATATVRI TVLDENDNSPAFEKDSYHLEVPENQEPVALFTMKAMDHDAGENGRVEYKIVAGDPAGDFH IDGNSGVLSTSQPLDRERIASYYLTIEARDHGTPQLSSTASVVVTVLDVNDNNPMFKEGA YTIDISEDAPIGTLVLDITATDADDGTNGMVLYYLSNESLGMFNVNQETGKITTAGLLDR EKRAAYSFLVNAVDSSPAKPRNASARVTVNIKDVNDNSPFFIQDPLIINISSSISINQVV ATMRAEDKDFGANASIFYRFASLVAGFSINSFTGEIRLVAPLSSMTQMERTLYVVATDQG TPAQLSTGVVVIYVKEEDYRGVRFPRSARDVSLQENAASGTAVVQIQAQYSDGSRRGISY SIFSGNKLNSFSIRPNTGEIWVQNSDGLDFEKTPRLRLVVKADSASSLSFMAVNLNLQDV NDNLPRFQLQNYIAYIWEAQGYDFPIIQVLADDPDQGQNGQVTYSIKSSTMSGLFKIDPL TGSITTAAIMDREIWTHTKLVVTATDRGSPKLAGIATLTVVIVDLNDNSPTIPLPQEIRV PENTLIGTELTQVTGNDVDSGPALSYTLLLDGSSVGKFGIHRYGGVISLTAPLDFEERSW YTLTICSSDSKHKSEANLTVLVEDVNDNAPAFTQDLYQVTLPEHSPPGSSVVTVTATDRD SGGNGKITYRVMSSTRGGFYIDQSNGTLFISQRAEFDPEKPSVSVVIEARDGGTPALSSN TTVQVQVSDVNDNAPRFKQSEYKATVSEDLLPGSTILTIEAVDSDLSRENCGFDFAIASG NPGNAFQIESSVRFLEGQGFQTVGTLILVERLDFETMSRYNLNIVASDRGVPQRSSSVPA VITITDSNDNPPSFGRTEYNVVLSEGAAAGTELLRLSAYDPDSAPNAVIRYVISSGDEAE LFGMDEWTGALKLLRPLDREAKASHMVIVQASDGQGQFALAPVSVEVKDINDNKPYFPLE TLTVSIRENQPTDSLVTILHAIDFDTGVYGQVRYYMVDQTGQGKDSFSVNQASGEVRAKL TFDFEKANTFQFMALALDTGNYSATVTVQVLVTGEDEYDPVFVSQAYSFEVPEGATKGQS IGQVLAKDEDAGADGIVLYTFANGSPYFGVNETTGVIYLKMDSQSRHSGGRSKRDARQMN LEVEAHSPLPASRITTAQVNIDVTHTSFGLPSEFNFLLVIVIAASLVAVVILVVIAVALF VVRSRRKKKEENDNTNIASSGTAMQKLDESHLTGVERIYHQALPGYTGEQTSGMGGTGGG AYTRGGSLDPSHSSGRGSAEAEAAEDDEIRMINEYPRVSSISSSMQDHLSTRGPDSGIQQ DADQLSDISCEPGMEAGQWFKGKKIGSLSGTLLPGQHPIYRDEGGGYLGVGRGLNISHPK DYAFPEDGKPSVDGSLTAIVASDEELRGSYNWDYLLDWCPQFQPLASVFTEIARLKDETA PPNPRRPFQPKAKTDPKPRIDPPPLITSVAHPGAKSVPPKPAIGQTFPHLASLRRSPISH EGSISSAAMSPSFSPSLSPLAARSPAVSPFGVTQGPSASMISTTEHSLDHPGEAEMGI NT seq 9897 nt NT seq  +upstreamnt  +downstreamnt atgaggattggttctccacttatcggattgggagagcttgcaatggaacgactgaacaga cgagagacctggaacaaacgggtgctgcttctcctctacgtggccttcagacttataacc ggtcactcatccactgtgttgggaaccctggacctacagctggatgaggagcagccagct ggcaccatcgtgggggacatcagtgctgggctcccccctggaaccactgcctccttgtac ttcatcacagacttggaaagtacaggggttggcagcgacttgcacattgacgaaactacc ggcattattaagacagccaaagtcctggaccgggagaccagggaccgctacaactttatt gctgtcaccatgcagggggtgacagtggaggtaacaattgtggtcaatgacatcaatgac catgcacccagctttcccaagagcagggccactttcaagatcccagaacaaacagcaata gggactaggttttccttagaaccagcatctgatgctgataaaggccagctcagtacacag ggttacctagtaaaaaatggcaacatgggacaagctttccgacttcagaccaagagaggc tccaatgaagtcttgtacttggatcttgtggtaaatggcatcctggatcgagagcaggta tcttcatattccttgtacttggaagcttttgatggtggctctccaaggaagaccgggcat atgattctggatgtcttggtccaagatattaatgacaatgcccctgtctttaatcagagc cgctatcacaccctgatctctgaaaacatgaagcctggtagcaccatcctgcaggtgttt gcctcagatgctgatgagggagacaatggactagtcatctatgagattaacagaaggcag agtgaccctgagcgatactttcttattgacccacacacaggcataataaccctcagcaag ccccttgactatgagatgagaaaagtccatgagctggtggtccaagctcgggacaatgcc agccaaccagagatcaccaatgcttttgtgtccatccatgtgcgtgattacaatgataac cagcctaccatgaccatcattttcctcagtgaggatgggtccccacagatctctgaggga gcccaaccaggccagtatgttgcacgaatttctgtatctgacccagattatagcgagtac gcaaatgtaaatgtctctttggaagggggagatggcaagtttggtctaaccactaaggat aacatcatctacctcatttgtgttgacaagattttagacagggaagaaagagattcctat gaactgagtgtgatggccactgactcagggactcctccattgagggcagagtcctcattt acaattcaggtcactgatgtcaatgacaacccccctctttttgaccagcaggtatacaag caaactatccctgaggtggtctaccctggcagttttgtccttcaggtgacagccagggat aaagaccaaggtcccaatggggacgtcaaatatagcatcctccaggaccgtgggacacat tctgattggtttacaatcgacccagttaccgggatcatcaccactgcaacagagctggat tacgagacagaccccaagccaagaatcactgtggtggccacagatggaggccgacctgct ctgtcttccacagctgtggtcaacgtagtcttgcaggatataaatgacaatgagcctgtt ttcgatagtaacttctacaacgtctcaatcaaggaaaacacagcagctggaacttgcttt cttcaggtgacggcaaaagatgcagacggaggatcttttggcaccatattctactccata ggctctgggatcggcagcgtggtccccacccagttcaccatcgggaaagagacgggtcag atttgtaccagcttaaccctggaccgggaccaggggccctccagctacgacttcactgtc actgctgtggatgggggagggctcaactccatggcctatgtgaaagtgttcctggttgat ataaatgataatagtccagttttctacccggtccactatgcagtcagcctcagcacgcag agtgcacctggcacctccgtcattaaggtgaccgcccacgatcaggacgaggggcagaat gggagggtgacatacagcacagcgcctgggggcagctccccatacttcacactcaacaaa gacacaggagtcatctcgctgtctcgctctctacatgggaaggcaaactctgtgatccag ctggtaatctcggcacaggacgggggtggactaacagcaaagttcaacgcccgggtcaac atcagtgttgtcgctggctcagtggtgcctccagtgtttgaacaagcacactacttcttc actgtgtccgaggacgtcctgagggggacacaagtaggcatagtgcgagcaagcagtgga cacggtcgttcggagggagtctcctacactatatcttctggagactctgatggttacttc actgttgactcagagacaggtgcccttcgaaccagctgcccactggaccacgaagcccag ccctctttggagttagaggtacaggcccggagtgggtcaccaccagcatttggacaaaca caagtccgaattaccattgcagacatcaatgacaacgctcccttcttcctgccctcgtcc tctgagtccttgctactggcagaggccactgatataggcacattggtgtaccatgtgagg gcagaggaccgtgactcaggccccaatgggcagctgcactttgacctactctccagcggg gggcagcgcacctttggcattgagcgcagcacaggggatgtccggcttattggtggcttg agctatgagactatgccccgttatgacctcaaagtggtggccaaggacagtggggtcccc cagctgagcaccaccttcacactagttgtacacgtgcaggcggagaatgaccagggccct gtttttgacactctcacctaccgcgtggagctgaaagaagggactccgctcaacactcgt tttctccaggtgagggctttgaatcgcgagaccactactaccagcagcactacagggtcc tcttccaccatactggcatatcatctccgcccagatggagacgcagctggatttgggatt gcccctgacagtggatggctatttgttaagagcatactagacagggaaactaaggacctt tacctgctgactgtcctggccacctcaggtaccgggcagctgaagaaaacgggcagcgcc actgtgcgtatttcagtgacagacgagaatgacaacgctcctcggctcacccaggagcgt gctttcttggccgtgcgagagaacctgcccccagggactgggtttgggagggtggctgcc actgatcgggatgcaggtctcaacagtcgtctaaccttcagactcctgcatcctgaccga aattttcagatgaactcccagacaggtgagatcagcactcggacagccctggaccgtgag caccagtccagttaccagctggttgtggtggtccaggatgggggcacccctccacgtagc gccacaggcaccgcccacattactgtactggatgagaacgacaatgctcctgccttcaca cacgcaccccctgggagggagctggtactgcaggtgttggaaggcaagccctctgggact ttgctcggctcagttcaagccaaagatcctgatgaaggtgaaaatgggacaatctactac tctctatctggcaccagggcagagcgtttttccctaaatccaaacactggagagctacgg ttagctgcccccctgagccacaccgacagggctgactataccttcaccgtgacagctaca gacaggggttcatctccacagagcacctctgcagccctgcgcatacaggtcctgaatccc agtaagttcctgccccacccaggcttgcccactttaaccctgaattctttagagggtatc aaaccaggatcggtggtgggttctgtgggctcaaaatacctccagcggcacccagaggag ggtcaagtgacttacacagttgtgggcagcagtgaccgtgacggcacgtttgtggtggac agactgacgggtgatatctatctggcacaagagctagattacgagcaaggggcacattac acccttcagattgaggtggacgacttctccagagcctacccaaccagccggatcatccta gtagacattgacgtgcaggacagcaatgaccatgtgccgcaattcccagaggacccggtg accattgtcattccagagaacatggtggctggatcttctatctataccttccaggctgtg gacaaagatggaagtggcccaaacagtgacattcactattccatcctccagcagtggccc actaatgatgagaacctggcactagaccctgtgactggggttatgtctctgggaaagagc ctggaccgcgaggttacaccctccctcctcctcatcgtccaggcagtggaccaagctctt aacgttagccagcgacgctccagctctgtgacagcgcgaatctttgtgaccgatgaaaat gacaatgcacctatctttagctccccaaccgctgtcagtgtcatggaggaccagccaatt ggttttgttgtcctctatgtgatggccagagactctgatttgggggagagtggacgtgtg gcataccgaattcaatcagggaatgctggcggcaggttcaatctgaaccccaactctggt tccctctccatagtgaaagctttggaccgggaagagcaaggactctacaacttgactatc gttgcagaggatcatggttccccccagtgcaccaccttgcagctactgtctgttcaggtg atcgatgtaaatgatgaggcccctcaattccaggaagttgaatttgaggcacaaatctca gagaaccagcatgctggcacctctgtactgagagtcactgctacagactgtgaccaaggt tcaaatggctttgtgacatatggagggatagtggaggatgggtttaccattgatcaagca acaggagtcgtaacagcaacccgagcccttgatcgtgaagtgcaagaccgctacactgtc acagtctatgctaaagatggtggactccctcctaattttgccacagcgacagtgaggatt acagtcttggatgagaatgacaactcgcctgcttttgagaaagactcgtaccacctagag gtgccagagaaccaggagcctgtggcattgttcaccatgaaagccatggaccacgatgct ggagagaatggcagggtggagtacaagattgttgcaggggacccagctggtgattttcat atcgatggcaactctggtgtcctctccacttcccagccccttgacagagaaaggattgcc agctattatttgaccattgaagcacgggatcatgggactccccagctgagtagcacagcc agcgtggttgttacagtcctggatgtcaatgacaacaaccccatgttcaaagaaggcgct tacactattgatatctctgaagatgccccaattggtactttggtgcttgacataaccgcc acagatgctgatgatggaactaatggcatggtcctgtactacctgagcaatgaatcacta ggcatgttcaacgtgaatcaggagaccgggaagatcactacagctggtctgctggaccgg gagaagcgagcagcgtacagctttctggtgaatgctgtggactcctcccctgccaaacca cggaatgcaagcgcacgggtgacagtcaatatcaaagatgtcaatgataactcgcccttt ttcatccaggacccactcatcatcaacatttccagcagcatctcaatcaaccaggtggtg gccaccatgagagcagaagacaaagactttggggccaatgcatccattttctatcgcttt gcctccctggtggccgggtttagcataaactctttcacaggtgaaatacgactagtggcc ccactgtcctccatgacccaaatggagaggaccttgtatgtggtggccacggaccagggc acacctgcacagttatccacaggggtggtggtcatttacgtcaaggaggaggactacagg ggagtccgctttccacgcagtgccagagatgtctccctgcaagaaaatgcagcttcaggc acagcagtggttcagatccaggcgcagtacagtgatggctccagaagaggaatcagctat agcatcttcagtggaaataaactcaattcattcagcatccgtcccaacacaggtgagatc tgggtgcagaactcagatggcctagattttgagaagactccacggctccgcttagtggtg aaagcagactctgcatcctctctctccttcatggctgtcaatctcaacctccaggatgtc aacgacaacctgccacgattccagcttcagaactacatcgcctatatctgggaggcacag ggctacgacttccccatcatccaggtattggcagacgacccagaccagggccagaatggt caggtgacctattctattaaatcgtctacaatgagtgggctcttcaaaatcgaccccctg acaggaagtataacaacagcagccataatggacagagaaatctggactcacacaaagctg gttgttacggcgacagacaggggaagcccaaagttagctggcatagctactctcaccgtg gttatcgtggacctgaatgacaacagtcctacaatcccactgccacaagagattcgagtg cctgagaacaccttaattggtacagagctcacccaggttacaggaaatgatgtggactca ggccctgccctctcatacacacttctgctagatggcagctctgttggaaagtttggaatc catcgatatgggggcgtgatttcgctgactgccccgcttgactttgaggagaggagctgg tacacacttaccatctgctcctctgactccaaacataaaagtgaggcaaacctgaccgtg cttgtggaagatgtgaatgacaatgcacctgctttcacccaggacctctaccaggtaaca ctccctgagcactcgccacctggcagctcagttgtcacggtaaccgctactgaccgagac tctggcggcaacgggaagatcacctacagggtgatgtcatcaaccaggggcggcttttac atagaccagagtaatggtaccctgtttatatctcagagggcagaatttgaccctgaaaag ccctcagtgagtgtggtgatcgaagcacgggatggtggaacaccggctctgtcatccaac actacagttcaagtgcaggtttcagatgtcaatgacaatgcaccccgcttcaaacaatcg gagtacaaagccacagtctcggaggacctgttgccaggctccacaattctgacaattgag gcagtggacagcgacctctcacgggagaactgtggctttgactttgccattgccagcggg aaccccgggaatgccttccagattgagagcagtgtccgcttcctggagggacagggtttt cagacagtggggacactcatactggtggagcgtctggattttgagaccatgtcaaggtac aatttgaatatagtagcctcagaccgaggggtcccccaaagaagctctagtgtgcctgct gtaattaccattaccgactctaatgacaaccccccttcgtttggacgcacagaatacaac gtggtgctgagcgaaggagcagcagccggtaccgagctcttgcgattatctgcctatgat ccagactccgctcccaatgctgtgatccgctatgtcatcagctcaggggatgaagctgaa ctgtttggaatggatgagtggacgggggcactcaagctcctgcggccactggatcgtgaa gccaaggcttctcacatggttattgtccaagcttcagatgggcaggggcagtttgctctg gctccggtgagtgtggaagtcaaagacattaatgacaataagccctacttccccttggag acactgacagtcagcataagagaaaaccagccgaccgattctctggtcactatcctgcat gctattgatttcgacactggtgtctacggccaggtacgctactacatggtcgaccaaacc gggcagggaaaggactccttttcagtgaaccaggcctcaggagaggtgcgagccaagcta acctttgatttcgagaaggccaacaccttccagttcatggcactggctttggacactggc aactattcagccactgtgactgtacaagtgctggtgactggagaggatgaatacgatcca gtttttgtctcacaagcttactcatttgaagtgccggagggagccacaaaaggccaaagc attgggcaagtgttagctaaagatgaagatgctggtgcagacggaattgtgctctacact tttgctaatggctcaccttattttggtgtcaatgaaaccacaggtgtgatctacctgaag atggacagtcaaagccgccatagtgggggacgatcaaagagagacgcgcggcagatgaac cttgaagtagaagcccatagcccgttaccagcttctcgcattaccactgcccaggtcaac attgatgtcacacacacttctttcgggctgccctctgagttcaactttttgctggtcatt gtcatagcagcttcccttgtggctgtcgtgatcctagtagtgattgctgtggcattgttt gtggtacgatccaggcgaaagaaaaaggaggaaaatgacaataccaacattgcctcatca ggcactgccatgcagaaacttgatgaatcccacttaacaggcgtagagaggatctaccac caggctctgcccggatatacaggcgagcaaacctcaggcatgggtggcacaggtggagga gcatacacaagggggggatcccttgatccctcacactcaagtggacgtggctcggcagag gcagaagccgctgaggatgatgaaatacgaatgatcaacgagtacccacgggtatctagc atatcctcttccatgcaggaccacctctcaacacggggacctgattctgggatccagcag gatgcagaccagctttcagacatctcctgtgaaccaggaatggaggcagggcagtggttc aaggggaagaaaattggcagcctcagtggaacactgttacctggacagcatcccatttac agagatgagggtggggggtacctgggggttgggcgagggttaaatatctcacaccctaag gattatgccttccctgaggacggcaagccttcagtggatggctccctcacagctattgtg gccagtgacgaagagcttaggggcagctacaactgggactacctgctggactggtgcccg cagttccaacccctggccagtgtcttcacagagatagctcggctcaaggatgaaactgct ccccccaaccccagaagaccctttcagcccaaagcaaagacagatcccaaaccaagaata gacccgccacctcttatcacttctgtggcacacccgggggccaaatcagtgcctccaaaa ccagccattggacagacttttcctcacctggcttctctccgccgttcccccatcagccac gagggctccatatcatcagcagccatgtcccctagcttctccccctccctctccccactg gcagcccgatcacctgctgtctcccccttcggtgttacccaagggccatcagcctccatg attagtaccactgaacactctttagatcacccaggtgaagcagagatggggatttaa

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