Acipenser ruthenus (sterlet): 117406183
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Entry
117406183 CDS
T07327
Name
(RefSeq) tumor necrosis factor receptor superfamily member EDAR-like
KO
K05162
tumor necrosis factor receptor superfamily member EDAR
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
117406183
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
arut04050
]
117406183
Cytokine receptors [BR:
arut04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
117406183
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Paralog
GFIT
Motif
Pfam:
Death_EDAR
TNFR_c6
PGA2
SMIM2
FUT8_N_cat
SpoIIIAH
CLN3
FHIPEP
PFF1_TM
SID-1_RNA_chan
Motif
Other DBs
NCBI-GeneID:
117406183
NCBI-ProteinID:
XP_033865981
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Position
9:17334088..17373365
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AA seq
452 aa
AA seq
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MVQEKGRKMIQQGAYRWSHFFSFLLVSIIPAVRAEYSSCGENEYYNQTTGGCQVCPQCQA
GEEPYMSCGYGTKDEGYDCMPCLPGKFSKGGYQICRRHKDCDGFFRATVLTPGTAESDAE
CGPCLPGYYILENRHRNIYGMVCHSCLMAPSNIKECMGTMLSDSGSSSRSFSSSTTTSFP
HAHKDLTGQGHLATALIIAMSTIFIMAIAIVLIIMFYILKTKPNSQACCSSHSVKTVEAQ
TSKQEEKKEAQENVDKLKPNPPKTVKSENDASSENEQLLSRSIDSDEEAALEKQGATDLC
LLSLVHLTRDKSSSTNNKSTGIQSRRKKILDLYTKACSVAEGLSPTELAFDCLEKTSRML
SSTYNTEKAIVKTWRHLAESFGLKRDEIGGMSDGMQLFDRISTAGYSIPDLLTKLVQIER
LDAVESLCTDILEWAEIPETTSPALSSRCASV
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggtgcaggagaaaggaagaaaaatgattcagcagggagcatacagatggtcccatttc
ttctcctttttgttggtgtccatcattccagctgtgagagccgagtattccagctgtggt
gagaatgagtactacaaccaaaccaccgggggctgccaagtgtgcccccagtgccaggct
ggggaagaaccgtacatgagttgtggctatggtactaaagatgaaggctatgactgcatg
ccttgcctaccaggcaagttctcgaagggtggctaccagatctgcaggagacacaaggac
tgtgatgggttcttccgggcgactgtcctcacccctggcacggcagagagcgatgcagaa
tgcgggccttgtctaccaggttactatatccttgagaacagacacaggaacatatatggg
atggtgtgccactcctgtttgatggcaccctcaaacatcaaagaatgtatgggcaccatg
ctcagcgattctggtagttctagcagatccttctcctctagcaccaccacttcattccca
catgcccataaagacctgactggacaaggacacttggctacagctcttataatagcaatg
tcaacaatcttcattatggctattgccattgtgttaatcatcatgttctacatactgaag
acaaaacccaattctcaagcgtgttgctccagccactcagtcaagactgttgaagcacag
accagcaagcaggaagagaagaaggaagctcaagagaatgttgacaaactcaaaccaaat
cctccaaagactgtcaaaagtgaaaacgacgcttcgtcagaaaacgagcagcttctcagc
agaagtatcgacagtgacgaggaggctgccctagagaagcaaggggccacagatttatgc
ctgttgtcactagttcatttaacccgtgataagtcctcatccacaaacaataagtccact
gggattcagagtcgaaggaaaaagatcctggatctctacactaaagcatgcagtgttgct
gaaggtctcagccccactgagctggcttttgactgcctggagaagacgagcaggatgctt
agctccacatacaacacagagaaagccatcgtgaaaacgtggcgccacctggccgagagc
tttggtctgaagagagatgagatcgggggcatgtcagacgggatgcagctcttcgaccgg
atcagcacagctggttacagcatcccagacctgttgaccaagctggtgcaaatcgagagg
ctggacgcggtggagtccttgtgcacagatattcttgagtgggctgagataccggagacc
acaagccctgctctctcatccagatgtgccagcgtgtga
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