Acipenser ruthenus (sterlet): 117406270
Help
Entry
117406270 CDS
T07327
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
arut04040
]
117406270
Ion channels [BR:
arut04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
117406270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRCC1_N
TRP_2
Ion_trans
Ank_2
PKD_channel
Ank
Motif
Other DBs
NCBI-GeneID:
117406270
NCBI-ProteinID:
XP_034779168
LinkDB
All DBs
Position
9:complement(44412692..44437703)
Genome browser
AA seq
1268 aa
AA seq
DB search
MMAPVKIKHVVSFSSQDPKHSVDTLLAKEAVRPWLCAPKDHSGLMKVELQLERASAIGYI
DIGNCGSAFIQIDVGRSSWPQDQPYMTLLPTATLMSPSESRQGTNRTGVRMFKEGDFLSQ
GDGELWDRVRVTCSQPFNKRVQFGLSFLQIRTPLDQNENEVLSDGTETQVSPGQLGASQA
REWLSSPTIQSTFFGQTQGGCSAETVQARLQRVDPSSCVRFRDRVCLSRSARMVISASQS
KRRPPACPSTDTASCSEGGHLEGTKQATKQSHTDPESKVADVTPAVATRKRPIKRRCPRG
SAGSRSTQSRTSGVAKRQRTVSDKGTASPPIISGTPELPIESDVETGVPESCCPICGDRF
SLDYLPVHASSCQGDEFPVPLDVESSYGPTQSPLRSSPEKLPCPLCGFQYPLSEIELHAS
NCGELTYPSGIWIDQAQWREIMNKKMRFPPTLIAAIQAANVLQVSRLLAVSDGILRQLDE
SEDRLWREALNLAIRLGNEDIINVLLECVKFDFRQIHEALLVAVDTNQPTVVKRLLDRLD
HEKGVGNNKVDIRSFSLAIFDHSIDNSHFAPGVTPLTLACQKDLYEIVEMLTKKGHVIPR
PHKVSCTCLECRNGRQYDLLKFSLSRINTFRGIASRAYLSIGSEDAMLSAFRLSRELKRL
SKKEPEFKPQYLSLEDLCQEFAVELLGMCRNQSEVTTILNDCGDDSEEELDQQTFEEGIP
NLARLRLAVNHNQKRFVAHPICQQVLSSIWCGSLSGWRGSKTAWKIFVSLGIFITMPVLC
LIYWLAPKSKIGKILKIPVIKFLLHSASYLWFLIFLLAESIIMESDREHFSTRNQSILQN
SFHMVWVVGFFWHECKEVWIEGMRNYLLDWWNFLDIMTLSMYLAAFSLRVLVALKGYFYC
LESETTLECVYFTQTGREGWRQEDPQIIAEVLFAVTSMLSFTRMAYILPAHESLGTMQIC
IGKMIDDMMRFMFILMIIGTAFLCGINNIYVNYVVSPRLGQFNETFPFLFWTMFGSADQS
AVDMPEYVVAEFVGRVMYGIFTLVIVIVLLNMLIAMITNSFQKIEDDADVEWKFARSKLY
LCYFREGLTLPVPFNVIPTPKSLFYLLRGIFRKICCCCKTKRLPDYPPIPSISNAVLQDK
DFPMESRVSYRLQVIKALVQRYIKTACREFEESKRKDVGNRITELNKVVGRLHSEMKQIR
KKLTQGTSISGEEEGASILGKYILGAKTNFRTFDQDSLGSEGKSSEDTDTGFGSQTGEEL
IEGGEEVN
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atgatggctccagtgaagattaaacacgtggtatcattcagttcccaggaccccaagcat
agtgtggacactctgctggccaaggaggctgtgcggccctggctttgtgcccccaaagat
cacagcggtttaatgaaggttgagctacagctggaaagggccagtgctattggatacatt
gacataggaaactgtgggtctgcgttcatccagattgatgtggggcgctcctcgtggcca
caggaccagccgtacatgactctgctgcccactgccacgctgatgagcccttcagagtcc
agacagggcaccaaccgcaccggtgtgcgcatgttcaaggaaggtgatttcctctctcaa
ggggatggcgagctctgggaccgggttcgagtgacctgcagccagcctttcaacaagcgt
gttcagttcggcctgtccttcctccaaatccgaaccccgctggaccagaacgagaacgag
gtgctgtctgacggcacagagacccaggtgtctccaggccaactgggagcaagccaggca
agagagtggctttccagcccaactatccagagtaccttctttggacaaacacagggtgga
tgttccgcagagacggtgcaggctagactgcagcgagtggaccccagttcatgcgtgcgg
tttagagacagagtctgtctcagccgatcggcccgcatggtgatttcagcgtcgcagtcc
aagagacgcccacctgcatgtccctcaacagacactgcctcctgcagtgagggaggacat
cttgaagggaccaagcaagcaacaaaacaaagccacacagatccagaaagtaaggttgct
gatgtcactcctgctgtggcaaccagaaagagaccaatcaagcggaggtgtccccggggc
tctgcaggaagcaggtctactcagtccaggacctctggtgtcgccaagaggcagaggact
gtgtctgacaagggaacagcttcaccccctattatcagtgggaccccagaactcccaatt
gagagtgatgtggagaccggagttcctgaaagctgttgtcccatttgtggagatcgcttc
agcctggattacctacctgtccatgcctcatcctgtcagggtgatgagtttccagtcccc
cttgatgtagaaagcagctacgggcccacgcaaagtccactgcgtagctcccctgagaag
ttgccctgcccactgtgtggcttccaataccccctttctgagattgagctccacgccagc
aactgcggagaactaacctaccccagtgggatctggatagaccaagcgcaatggcgggaa
attatgaacaagaagatgcgtttcccgccgactctgattgcggcaatccaggcagcgaac
gtgctgcaggtgtccaggctgctggcagtcagtgacgggatcctgcggcagctggatgaa
tcagaggaccgcttgtggagggaggccctgaatctggccatccggctgggcaacgaggac
ataataaatgtcctcctggagtgtgtcaagttcgacttccgtcaaatccatgaggccttg
ctggtggccgtggacaccaaccagcccactgtggtcaagcgcctcctggacaggctggac
catgagaaaggggttggcaacaacaaggtggacatccgttccttctcgctggctatcttt
gaccactccatcgacaattcacattttgcccccggggtcaccccgctcacactggcctgc
cagaaagacctgtatgagattgtggaaatgctgaccaagaagggtcacgtcatcccccgg
ccccacaaggtctcctgcacctgcctggagtgccgcaacgggcgccagtatgacctgctg
aagttctcactctcccgcatcaacaccttccggggcatcgccagtcgtgcctacctttcc
atcggcagcgaggacgccatgctcagcgccttccgcctcagccgcgagctcaagaggctc
tccaagaaggagcccgagttcaagcctcagtacttgagcttggaggacctgtgccaggag
tttgcagtggagctgctgggaatgtgcaggaaccagagtgaagtgacgacgattttgaac
gactgcggagacgacagcgaggaggaactggaccagcagaccttcgaagagggcatcccc
aacttggctcggctgagactcgctgtcaatcacaaccagaaacggtttgtggcccatccc
atctgtcagcaggtgctctcgtcgatttggtgcggcagtctgtctggctggcgcggcagc
aagaccgcgtggaagatcttcgtctcgcttgggatcttcatcaccatgcctgtgctctgt
ctcatctactggctggctcccaaatccaagatcggaaagatcctgaagatcccggtgata
aagttcctgctacactctgcctcctatctgtggttcctgatcttcttgcttgcggagtcc
atcatcatggagagtgaccgggaacacttctccacgcgcaaccagagcattcttcagaac
tccttccacatggtgtgggtggtgggcttcttctggcatgagtgtaaggaggtgtggatt
gagggtatgcgcaactacctgctggactggtggaacttcctggacatcatgaccctcagc
atgtacttggccgccttcagcctgcgcgtgctcgtcgccctcaagggctacttctactgc
ctggagtccgaaaccacactggagtgcgtctacttcacacaaaccggacgagaggggtgg
cgtcaggaggacccccagatcattgctgaggtactctttgctgtgacgagcatgctcagt
ttcacacggatggcgtacatcctacctgcccacgagtctctgggaacaatgcagatctgc
atcgggaagatgattgacgacatgatgaggttcatgtttatcctgatgatcattggaaca
gccttcctctgtggaatcaacaatatatatgtgaactacgttgtatccccacgcctagga
cagttcaatgagacattcccgttcctgttctggaccatgtttgggtcagcggaccaaagc
gcggtggacatgcctgagtatgtggtggctgagtttgtggggcgggtgatgtacgggata
ttcaccctggtgatcgtcatagtactgctcaacatgctcatcgccatgatcaccaactcc
ttccagaagatagaggacgacgcggatgtggagtggaagtttgcacgctcgaagctttat
ctctgctacttcagggagggtctcaccctgccggtccccttcaacgtcatccccacccca
aagtccttgttctacttgctaaggggcattttccggaagatctgctgctgttgtaaaacc
aagcgattgccggactacccacctattccctcaatttcaaacgcagtactgcaggataag
gatttccccatggagagtcgtgtgtcatacaggctgcaggtcatcaaggcgctagtgcag
cgatacattaagacagcctgcagggagttcgaggagagcaagaggaaagatgttggcaat
cggattacagagctgaacaaagtggtggggcgactccactctgaaatgaagcaaattcgc
aagaaactcacccagggcacttccatttccggagaggaagagggcgctagcatactgggc
aagtacatccttggggccaagaccaacttccggaccttcgaccaggactccctgggatcc
gaaggcaagtcctctgaagacacggatacggggtttggatcgcagacgggagaagagttg
attgagggaggcgaggaagtgaattag
DBGET
integrated database retrieval system
