Acipenser ruthenus (sterlet): 117406335
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Entry
117406335 CDS
T07327
Name
(RefSeq) cullin-4A-like
KO
K10609
cullin 4
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03420
Nucleotide excision repair
arut04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117406335
09124 Replication and repair
03420 Nucleotide excision repair
117406335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arut04121
]
117406335
03400 DNA repair and recombination proteins [BR:
arut03400
]
117406335
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
arut04147
]
117406335
Ubiquitin system [BR:
arut04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
117406335
DNA repair and recombination proteins [BR:
arut03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
117406335
TCR (transcription coupled repair) factors
Cul4-CSA complex
117406335
Exosome [BR:
arut04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117406335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
DUF4715
Motif
Other DBs
NCBI-GeneID:
117406335
NCBI-ProteinID:
XP_033866163
LinkDB
All DBs
Position
9:26891113..26917300
Genome browser
AA seq
758 aa
AA seq
DB search
MMSEETGQKNNNKANCTALAEHTNGLTKPSALVTKPGASKKLVIKNFKDRPKLSDNYTQD
TWKKLQEAVGAIQNSTSIKYNLEELYQAVENLCSYKVSATLYKQLRQVCEDHVKAQIHQF
REDSLDNVLFLKKMNTCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDTGLELFRSH
IISDKMVQSKTVDGILQLIERERNGEAVDRSLLRSLLNMLSDLQVYKDSFEQKFLKETHR
LYAAEGQSLMQEREVPEYLHHVNKRLEEETDRVITYLDQSTQKQLILTVEKQLLGEHLKA
ILQKGLHHLLDGNRITELTLLYQLFSRLKGGLQVLLQHWSEYIKTFGSALVMMPEKDKDM
VQELLDFKDKTDQITEACFQKNEKFINSMKESFETYINKRPNKPAELIAKYVDSKLRAGN
KEATDEELERILDKIMIIFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKH
ECGAAFTSKLEGMFKDMELSKDVMIQFKQFMQNQSDPGNIELTVNILTMGYWPTYIPMEV
HLPPEMVKLQEVFKMFYLGKHSGRKLQWQPTLGHAVLKSEFKEGKKELQVSLFQTLVLLM
FNEGEEFTFDEIKTATGIEDGELRRTLQSLACGKARVLIKNPKGKDVEDGDKFLFHADFR
HKLFRIKINQIQMKETIEEQVSTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSELYN
QLKFPVKPGDLKKRIESLIDRDYMERDKDNPNQYHYVA
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcggaagagactgggcagaaaaacaacaataaagctaactgcactgctttagca
gagcacacgaacgggcttacaaaaccatctgcactagtcaccaaacctggggcatctaag
aaattagttataaaaaattttaaagatagaccaaagctctcggataattacactcaggat
acatggaaaaaactccaggaagcagttggagccatacagaatagcacctcaattaaatac
aacctggaagagctgtatcaggcagtggaaaacctttgttcctataaggtgtctgctaca
ctgtacaaacagctaagacaagtctgtgaagatcatgtcaaagcgcagatacatcagttc
agagaagattctttggacaatgttttatttcttaaaaagatgaatacatgttggcaggat
cactgtagacaaatgataatgatcagaagcattttcttatttttggatcgaacatatgtc
ctccagaattcaatgctgccctctatttgggacacgggtctggagttgttcagaagccat
ataatcagtgataagatggtccagagtaaaacagttgacggcattcttcagctgattgaa
agagaacggaacggggaggctgtagacagaagcttgttacgcagcttgttaaatatgctt
tcagacctacaggtgtataaggattcctttgaacagaagtttttgaaagagacccatcgt
ttatatgcagctgagggtcaaagcctgatgcaagagagagaggtaccagaatatcttcac
catgtcaacaaacgactggaggaggagacggatagggtaataacatacttggatcagagc
acacagaaacagctaatactcactgtggagaagcagttactcggagaacacctaaaagcc
atccttcaaaaagggcttcatcacctgctggatggaaacaggataactgagctcaccctc
ctgtaccagctcttcagcaggctcaaaggaggactgcaggtgcttttgcaacactggagc
gaatacattaagacctttggaagtgcactagtgatgatgcctgagaaagataaagacatg
gttcaggagctgttagacttcaaggataaaacagaccagatcactgaggcctgcttccag
aaaaatgaaaagtttatcaattctatgaaggaatcctttgagacgtatataaacaagagg
cccaacaagcctgcagaattaatagcaaagtatgttgattcaaaattacgtgctggaaat
aaagaagcaacagatgaagagctggagagaatactggataagataatgatcatcttcagg
tttatccacggtaaagatgtgtttgaggcattttacaagaaagatcttgccaagcggttg
ctggttgggaagagtgcttcagtagatgccgagaaatcaatgctgtccaaactgaaacat
gaatgcggagcagcatttaccagcaaactagaggggatgtttaaagacatggagctgtcg
aaagatgtcatgattcaattcaaacagtttatgcagaatcaaagtgacccaggcaacata
gagctcacagttaatatcctcacgatgggatactggcctacgtatatacctatggaggtg
caccttccgcctgagatggtgaaacttcaagaagtattcaagatgttttaccttggcaag
cacagtggcagaaagctgcagtggcaacccacactgggacatgctgttctcaaatctgag
tttaaggagggtaagaaggagcttcaggtgtcccttttccagacacttgttcttctcatg
ttcaacgaaggagaggagttcaccttcgatgagattaaaacagctactggaatagaggac
ggcgagttgagaagaactctacaatctcttgcctgtggaaaagctcgagttctcattaaa
aaccctaaaggaaaagatgtggaagatggtgataaattcttatttcatgctgatttcagg
cacaagttattcaggataaagataaaccagatacagatgaaagaaacgatcgaggagcaa
gtgagcaccacggagagggtgtttcaagacagacagtaccagatagacgctgccattgtc
cgtatcatgaagatgaggaagactctgagtcacaaccttcttgtgtctgagctctacaat
caactcaaattcccagtcaagcctggagacttaaagaagagaattgaatccctcattgac
agagactacatggagagagataaggacaatcccaaccagtaccattatgtggcataa
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