Acipenser ruthenus (sterlet): 117406451
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Entry
117406451 CDS
T07327
Name
(RefSeq) putative ATP-dependent RNA helicase an3 isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
117406451
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arut03019
]
117406451
03041 Spliceosome [BR:
arut03041
]
117406451
03036 Chromosome and associated proteins [BR:
arut03036
]
117406451
Enzymes [BR:
arut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117406451
Messenger RNA biogenesis [BR:
arut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
117406451
mRNA cycle factors
Common to processing body (P body) and stress granule
117406451
Spliceosome [BR:
arut03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
117406451
Chromosome and associated proteins [BR:
arut03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
117406451
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DUF4318
Motif
Other DBs
NCBI-GeneID:
117406451
NCBI-ProteinID:
XP_033866360
LinkDB
All DBs
Position
8:complement(38403004..38434469)
Genome browser
AA seq
749 aa
AA seq
DB search
MSHVAVENALSLDQQLAGLDLNSAADGQGGGVSGRRYIPPHLRNKEASKNAGNAYTSGTY
SGYSLPTVRSYSSGWDNGQGSNGFVNGYHDDRDSRMNGGNSFGGRGGSTRGDRGGRGGYR
GNRGGGSFNQCQPIQNTGFAYDKDNSGWNKDQRDPYTSFGGRNDRGKSSFYSDRGTGSRG
RFDRGGFGSRDGGGNSRWVEDNSRDEDWSKPLSPNERVEQELFSGGNTGINFEKYDDIPV
EATGSNCPPHIESFQDVEMGEIIMGNINLTSYTRPTPVQKYAIPIIKSKRDLMACAQTGS
GKTAAFLLPVLSQIYTEGPGEALQAAKANPQENGKYGRRKQYPLSLILAPTRELALQIYD
EARKFAYRSKVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLEYCKYL
VLDEADRMLDMGFEPQIRRIVEQDAMPPKGIRHTMMFSATFPKEIQILARDFLEEYIFLA
VGRVGSTSENITQKVVWVEEGDKRSFLLDLLNATVIPSEVQENASEISDKPGKDSLTLVF
VETKKGADALEDFLYREGYACTSIHGDRSQRDREEALLQFRSGRCPILVATAVAARGLDI
SNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKNSNITKDLLDILVEAKQEV
PSWLESLAYEHQHKSTGRGRSKRFSGGFGARDYRQTSNTANSFGSRGSRPGGGHGGNRGF
GGGGGGFGNFYSSDGYGGNYNSQVDWWGN
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggccgtcgaaaatgcacttagtctagatcagcagcttgctggcctagac
ttgaactccgctgctgacggacagggaggtggagtgtcaggcagacgttacattccaccc
catttaaggaacaaagaggcttctaagaatgcaggaaatgcttatacttctggtacatac
agcggttattcactacctacagtaaggagctattcttctggctgggacaatggacaagga
agcaatggctttgtgaatggatatcatgatgatagggattctcggatgaatggtggcaac
agctttggaggaagaggaggatccacacgaggtgacagaggtgggcgtggaggttatcgt
ggcaacagaggtggtggctcctttaaccagtgccaaccaattcagaatacaggctttgca
tatgataaagataactctggatggaacaaagaccagagggacccctacactagctttgga
gggcgtaacgatagaggaaagtcctctttctatagtgaccgtggaactgggtcaagagga
aggtttgaccgtggaggatttggctcccgggacggtggcggaaacagccgatgggttgag
gacaattcccgtgacgaagattggtcaaaaccgctgtcgcctaatgaacgtgtggaacaa
gagcttttctctggaggcaacacaggaattaactttgaaaaatatgacgacattcccgtt
gaggccactggatcaaattgccctccacatattgaaagtttccaagatgtggaaatggga
gaaatcattatgggcaacataaatttgaccagttacactcgacctactccagtgcagaaa
tatgctattccaataatcaaatcaaagagggacttgatggcttgtgctcaaacaggctct
gggaaaactgcagcgtttttacttccagttctcagccaaatctacactgaaggtccagga
gaggctttacaagcggcaaaagccaaccctcaggaaaatggaaaatatggacggcgtaaa
cagtatccactctctttgattctggccccaacccgagaactggcgctccagatctatgat
gaagcaagaaagtttgcttaccgttccaaagtacgtccatgtgtagtgtatggtggggct
gacatcggacagcaaattcgtgacctggaaagaggctgtcatctcctggtagctactcct
ggtcgtcttgtagacatgatggagaggggaaagattggtctggaatattgcaagtatctg
gtgctggatgaagcagacagaatgcttgacatgggttttgaacctcaaattcgtcgcatt
gttgaacaagacgccatgcctccaaaaggaatccgtcacaccatgatgtttagtgctact
ttccctaaagaaatccagatccttgctcgtgactttctggaagagtacattttcttggct
gtgggccgtgttgggtctacctccgagaacatcacccagaaagttgtttgggtagaagag
ggagataagcgttccttcctgcttgatctgctaaatgctacagtaattccgagtgaggtt
caggaaaacgcaagtgaaatctccgacaaacctggcaaggactccttgactctggtattt
gtggaaaccaagaaaggtgcagatgcccttgaagacttcttgtatcgtgaaggctatgct
tgcaccagtatccatggggaccgttcacagagagacagagaggaagcccttctgcagttc
cgttcaggaaggtgcccaattttggtggccacagctgtggctgctcgtggcttggacatt
tctaatgtgaaacatgtcattaactttgatcttccaagtgacattgaagaatatgtccat
cgcattggccgtacgggccgtgtaggaaaccttggtctggcaacctcatttttcaatgag
aagaacagtaacattaccaaggacctccttgatattcttgttgaagccaaacaggaggtt
ccctcttggctggagagcctggcttacgagcaccagcacaagagtaccggacgtgggcgt
tccaagaggttttctggtggatttggcgcaagagactatcgtcagaccagcaatactgcc
aacagctttggcagccgtggaagccgtcctgggggaggtcatggtggaaacagaggattt
ggtggcggtggtggtggctttggaaacttttacagcagtgatggttatggaggaaactac
aactcccaggttgactggtggggaaactga
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