Acipenser ruthenus (sterlet): 117406465
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Entry
117406465 CDS
T07327
Name
(RefSeq) RNA-binding protein 26-like
KO
K13192
RNA-binding protein 26
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
arut01009
]
117406465
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arut03019
]
117406465
03041 Spliceosome [BR:
arut03041
]
117406465
Protein phosphatases and associated proteins [BR:
arut01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117406465
Messenger RNA biogenesis [BR:
arut03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
117406465
Spliceosome [BR:
arut03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117406465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
Nup35_RRM_2
RRM_Nup35
zf-CCCH
zf_CCCH_4
Microp_apicomplexa_17
Motif
Other DBs
NCBI-GeneID:
117406465
NCBI-ProteinID:
XP_033866410
LinkDB
All DBs
Position
8:56339584..56363832
Genome browser
AA seq
1004 aa
AA seq
DB search
MIIENLEALKSWLSKTLEPICDADPSALAKYVVALVKKDKTEKELKALCLDQLDVFLQKD
TQIFVDKLFNAVNSKSYLPQFEQPSSTTVRTEPFQHPEKDDVKKDEQVNKEEERDTKKFP
RRINHSPQQSSSRYRDSRIRDDRKKDDRSRKRDYERNPPRRDSYRDRYNRRRGRSRSYSR
SRSRSKDRPRDRDRSRTRSRSRTSRERDTGKSKYDLDRTERTEPSENNYTSASLVSSDHY
PVPALSSTITVIAPTHHGNNTSESWSEFHEDQIDHGSYGRGPPPKKRCRDYDEKGFCMRG
DMCLFDHGSDPVVVEDVNLPGMLPFPAQPPPVEGPPPPGLPPPPPMMTPPPINLRPPGPP
PSPLPPSLPLVTGPPPPLPPLQPLQPSGMDAPPNSITGSVPPIVTSVIRHPPPQAQPALF
TSETYEPDVYNPEAPSITSTSRPVYRHRVHAQRPNLIGLTLGEVDLPPRENPANNSMRIM
VESESRKRATGAVDSGMLTKKPWFDKQNFSNANNLGFQKKMQFGAENTKLEVRKIPLELN
NIRKLNEHFCKFGTIVNLQVAYKSNPEGALIQFSSHEEAKRAISSTEAVLNNRFIKVFWH
QEDLAPQLQPTAQQVHQTSAQQPSVSALKQSVKDRLGPIPTTTTEPTQPQPSNTVSTPNT
SKLSVKERLGFCSKPSAVANQTVLSTSMGLTKTVYNPAALKAIQKTMPFVNTGVADHSEA
LKKKQEALRLQHDVRKKKQEIVGKHIETQKILISKLEKNKTMKPEDKAEIMKTLKTLTNS
ITKLKDELKAISSGIPHKTMKTKAQMQKELLDSELDLYKKMQAGEDVAQLRKKYTELQLE
AAKRGILSSGRGRGGHARGRGALRSRGRGMRGRGRGAPLHAVVDRRPRALEISGFTEPDR
EDLLPYFAQFGEIEDWQIDDSSLNAVITYRTRAEAEAAAVHGAQFKGQDLKLAWHKPVTT
LTSADPEEAEPDEEEFQSESLLDDALLQDDDEEDDDNESRAWRR
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atgataatagaaaaccttgaggctctaaagtcgtggctctcaaagacgcttgaacccata
tgtgatgctgatccatctgctcttgctaaatatgttgttgccttagttaaaaaggataaa
accgagaaagaacttaaagcattatgcttagaccagttggatgtatttcttcagaaagat
acccagatttttgtcgacaaacttttcaatgctgtgaattcaaagagttatctacctcag
tttgagcagccttcatcgacgactgtaagaacagaaccttttcaacacccagagaaagat
gatgtaaaaaaagatgagcaggtaaataaggaagaagagagggacacaaaaaaattcccc
agaagaataaatcacagcccccagcagtccagctcacggtacagagacagcagaattcgg
gatgaccgaaaaaaggacgaccgctctcgaaaaagggattacgagcgaaatcctccaagg
agagactcctacagggataggtacaacaggaggaggggtcgcagccgcagttacagcagg
agtcgcagccgcagcaaagacaggcctcgtgaccgggacagaagcagaacaagaagccga
agcagaacaagcagagaaagggacactggtaaatccaagtatgacctagacagaacagaa
agaaccgagccttcagagaacaattatacgtcagcatcattggtttcatctgatcactat
cctgtcccagcactcagcagtactatcactgttatagcaccaactcaccatggcaacaac
actagcgaaagctggtcagaattccatgaagatcaaatagatcatggctcatatgggaga
gggccaccaccaaagaaacgctgcagggattatgacgaaaagggattctgcatgagagga
gatatgtgtctgtttgaccatggaagtgacccagtggttgtggaagatgtcaatctccca
ggcatgctaccttttccagcacagccccctcctgttgaaggacctccccctcctggcctt
ccaccacctccccccatgatgacgccacctcctataaatttaagaccgccaggtccccct
cccagtcctttacctccaagccttccactggtaacagggcctccaccacctcttcctcct
ctccaacctctccagccctctggcatggatgcacccccaaactccattacaggttctgta
cctccaattgtgacctctgtgattcgtcatccaccacctcaagctcagcccgctctcttc
acttcagaaacatatgaacctgatgtatataatcctgaagcaccaagcataaccagcact
tcaagacctgtgtatagacacagagtacatgcgcaaagaccaaacctaatagggctgaca
ttgggggaagtggatcttccaccaagagaaaaccctgctaacaacagcatgagaataatg
gtggaatcagagtccagaaaaagagcaacaggggcggtagacagtgggatgcttactaag
aaaccctggtttgacaagcaaaatttcagtaacgctaataacctaggattccagaagaag
atgcagtttggagctgaaaatacaaagctagaagtaaggaagattcctttggagctcaat
aacatccgcaagcttaatgaacacttctgcaaatttggcactattgttaatctccaggtg
gcttataagagtaatcctgaaggtgcccttattcagttttccagtcatgaagaggctaag
agagctatatccagcaccgaagctgtgcttaacaatcgcttcatcaaggtattttggcat
caagaagaccttgcaccccaactgcagcctacggcacaacaggtgcatcagacttcagca
cagcaacccagtgtgtcagcactcaaacagtctgtaaaagatagattgggtcctatacca
acaaccactacagagccaactcagccacaaccttcaaacacagtctccactccgaatacc
agtaaactttctgtgaaagaaaggttgggtttttgttctaaaccatcagcagtcgcaaat
caaacggtgctgtctacttctatgggccttacaaaaactgtttacaaccctgctgccctg
aaggcaatacagaaaacaatgccttttgtgaacactggtgttgcagaccacagtgaagcc
ctgaaaaagaaacaggaagcattaaggcttcaacatgacgtaagaaaaaagaagcaggaa
atagtgggaaaacacattgaaacccaaaagatattaatctcaaaactggagaaaaacaaa
accatgaaaccagaggacaaggctgaaatcatgaaaaccctgaaaactctgacaaacagc
ataaccaaactgaaagatgaactgaaagcaatctcaagtggcattcctcacaaaacaatg
aaaaccaaggctcagatgcaaaaagagctgctggattcagagttagatttgtataagaag
atgcaagctggggaagatgttgcacaactgaggaaaaagtacacagaacttcagctagag
gctgccaaaagaggaatcttgtcgtctggacgtggtagggggggacatgcccggggacgt
ggggcacttagaagccgtggcagaggaatgcgtggaaggggaagaggggccccactgcat
gcggtggtggaccgtcgcccaagagctttagagatctctggttttactgaacctgataga
gaagacttgcttccttattttgcacaatttggtgaaattgaagactggcagattgacgac
tcgtctcttaatgctgtcattacctacaggacaagggcagaagcggaggctgctgctgtt
catggggctcagttcaaaggtcaggaccttaaactggcatggcataagcctgtcaccacc
cttactagtgctgatcctgaggaagcagaacccgatgaagaggagtttcagtcggagtcc
ttgctagatgatgctttacttcaagatgatgatgaagaagatgatgacaatgaatctcgg
gcatggagaagataa
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