Acipenser ruthenus (sterlet): 117406500
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Entry
117406500 CDS
T07327
Symbol
chd1l
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
arut03036
]
117406500 (chd1l)
Chromosome and associated proteins [BR:
arut03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
117406500 (chd1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
ResIII
DEAD
LIG3_BRCT
BRCT
AAA_22
SWI2_SNF2
BRCT_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
117406500
NCBI-ProteinID:
XP_033866468
LinkDB
All DBs
Position
8:33973592..34012917
Genome browser
AA seq
999 aa
AA seq
DB search
MSQFLQNVKQNIQPKQPKGDIKEQDLGTWGLTGIKLRSYQLDGLNWLVQCFNNQHGCILG
DEMGLGKTCQTISLLVYAVGSLNEKGPFLILSPLSVLSNWKEELERFAPNLSVVVCTGDK
EERAELHRDLKNRSDFHILLTTYEICIRDACFLKRFDWRVLVVDEAHRLKNQNSLLHKML
SEFSVGFTVLLTGTPVQNSLQELFSLLSFIEPQVFPEHEAEGFVTSYRDVETQKERAAEL
HSLLQPFLLRRVKTDVAAELPRKSELVVYHGMSALQKKYYRAVLTKDLGAFDNERGSKAR
LSNILIQLRKCVDHPYLFDGVEPEPFEIGDHLIEASGKLHLLDTMLSFLHDRGHRVLLFS
QMTRMLDILQDYMEYRGYSYERLDGSVRGEERHLAIKNFSSKDVFVFLLSTKAGGVGMNL
TAADTVIFVDSDFNPQNDLQAAARAHRIGQKRPVKIIRLIGRDTVEEIVYRRAMSKLKLT
NAVIEGGQFSHRDEGDSSMAADMQLSEILKFGVDKLLSSEESTIQDVDLGKILGKTRKGE
WVTEDPPLPTEDESSESEETETHMYLYEGKDYSKEPSAEDKKTFEHLLDLENVLLADAGR
EGRALRNKSDVLLTGLLDVTASRKRVLSPEELQQRRQKRQAAAAKRAKLMEDKKQQRKEA
EHKKKLAWWESCGYHSLCVSSEDSEEEKGGSEDEGSDDVHVDLDSTDSEHTAIHYIMGDV
THPQAAREDAIIVHCVDDSGRWGRGGLFMALEIRSDQPRRQYELAGKMKDLGLGNVLMFP
IDDKESRHDGQDLLALIVTQQRDRSNNVSGIKLPALEEGLKKISTVAKKKKASVHLPRIG
HATKGFNWYGTERLIRKYFASRNIPTYIYYYSKKVPSSVSQPTASSRKLGSSDDQQSGHM
SQHLAEFMSGVNVYFYNLLPSERKYLARYLITYDGTEDTVLGSETTHVVAEVENAVHMQD
LQTILQGNPQVTVVQKKWLEACFSNQKKVSTAQYQIDFD
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagtttctgcaaaatgtcaaacaaaatattcagccgaaacagcctaaaggggac
ataaaggagcaggatctggggacatgggggctgacagggataaagctgagatcctaccaa
cttgatggcttgaactggctggtccagtgctttaacaaccagcatggctgcatcctggga
gacgagatgggtcttgggaagacttgccaaacaatatctcttcttgtgtatgcagtgggc
agtttgaatgaaaaaggcccttttcttatcctgagtccactttctgtgctgagcaactgg
aaagaagaactggaaaggtttgctcccaacctttcagttgttgtctgtacaggggacaaa
gaggaaagggccgagctgcacagagatctgaagaaccggtcagatttccatatcctgctg
actacatatgagatctgcatcagagatgcctgttttctgaagagatttgattggagggta
ttggttgtggatgaggcccacaggctgaagaatcagaattccttgctgcacaagatgctc
tctgagttttcagtggggttcactgtgctgctgactggaacacccgttcagaacagtctc
caggagctcttctccttgctgagcttcatcgagccccaggtcttccctgagcacgaggca
gagggtttcgtcacgagctacagagatgtggagacacagaaagagcgagccgcagagctg
cacagcctcctgcagccattcctgctgcgccgagtgaagacggatgtggcggcagagctg
cccaggaagagcgagctggtggtgtatcacggcatgtcagccctgcagaagaagtactac
agggctgtcctcaccaaagacctgggtgcatttgataacgaacggggctccaaagccagg
ctgtcaaacattttaattcagctccggaagtgtgttgaccatccatatttatttgatggt
gttgaaccggaaccttttgaaatcggagatcatctcattgaagccagtgggaagctccat
ctcctggataccatgctcagcttcttgcacgacaggggccatcgtgtattgctgttttct
cagatgacacgaatgctggatatcttgcaggattacatggaatacagaggctatagctat
gaacggcttgatggatctgtgaggggcgaagaaagacatcttgcaatcaagaatttcagt
tccaaagatgtttttgtatttctcttgagcacaaaagcaggtggagttggcatgaacctg
actgctgctgacacagtgatttttgtggacagtgatttcaatccccagaatgacctgcag
gccgcagctcgagcccatcggattggccagaaaaggcctgtgaaaatcatccgcctgatt
gggagagatacggtagaggagattgtctacaggcgtgccatgtccaagctgaagttaacc
aatgctgtgatcgaaggaggacagttttctcaccgagacgaaggggattcctccatggct
gcagacatgcagttgagtgaaatcttaaaatttggagtggataagctcctttcttcagag
gaaagcaccatccaagacgtggacctgggaaagatcctggggaagaccaggaagggcgag
tgggtgacagaagaccctccgctccccacagaggatgagagctcagagtcagaagagact
gaaacccatatgtatttatacgaaggcaaagattactccaaagagcccagtgcagaggac
aagaaaacatttgagcatctgctggatttggaaaacgtacttcttgctgatgctggaaga
gaaggacgagcacttcgaaataaatctgatgttctattgaccggactccttgatgtgaca
gccagcaggaagagagtgctgagcccagaggagctccaacagaggcgccaaaaaagacag
gcggcagcggccaagcgggcaaaactgatggaggacaagaaacaacaacggaaggaggcc
gagcacaagaaaaagctggcgtggtgggaatcgtgcgggtaccactccctgtgtgtctcc
tcagaggacagtgaagaggagaaggggggctcggaggatgaggggagcgatgatgtccat
gtggacctggactccactgactcagagcacacagccatacactacatcatgggggacgtc
actcacccccaggctgcccgggaggatgccatcatagtgcactgcgtagatgactctggt
cgctgggggagaggaggattgttcatggctttggagatccggtcagaccagccaaggaga
cagtatgagctggctggaaagatgaaagacttgggacttggaaatgtgctgatgtttcca
attgatgacaaagaatccagacatgatgggcaagacctgttggccttgatagtgactcag
cagagagatcgatcaaacaatgtatctggcatcaagctcccggcattagaagaggggctg
aaaaagatttctactgtggccaagaaaaagaaagctagtgtccacctccctcgaatagga
catgcaacgaaaggttttaactggtacgggacagaaagactcatccggaagtactttgct
tccaggaatatcccaacttacatatattactattccaagaaggttccttcatctgtttct
cagcccacagcatcttccagaaagctggggagcagtgatgaccagcagtcaggccacatg
tcacagcacctggccgaattcatgtctggggtcaatgtgtacttctataacctactcccc
tcggaaagaaagtatctggctcgctacttgattacatatgatggcactgaagacacagtc
ttgggttcagaaactacccatgttgttgcagaggtggagaacgcagtccatatgcaggat
ctgcagaccattcttcaagggaacccccaagttacagttgtccaaaaaaagtggttagaa
gcctgcttctccaaccagaagaaagttagcacagctcagtatcaaattgatttcgattga
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