Acipenser ruthenus (sterlet): 117406551
Help
Entry
117406551 CDS
T07327
Name
(RefSeq) protocadherin-8-like
KO
K16499
protocadherin delta 2
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
arut04515
]
117406551
Cell adhesion molecules [BR:
arut04515
]
Cadherins
Protocadherins
117406551
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
SCAN
Cadherin_CELSR2_9th
zf-CCHC
RRF
Motif
Other DBs
NCBI-GeneID:
117406551
NCBI-ProteinID:
XP_034778971
LinkDB
All DBs
Position
8:59312059..59371964
Genome browser
AA seq
1067 aa
AA seq
DB search
MAYRALIATEASNYDKVKEAILSCLGITEETYRRRFREYQLSKGMRPRVAGQYLMDQCTR
WLQPEEHTPQELVQKIVIEQFASVLPPGNRELIKRNRPTTIEDAIILAEACEDANEGAVS
GPTPAPKLTRTNQPMKPRGGNQTFRPWRLRLTPSWAREKSPNLPVIDSQDRQTPLALPTP
VCYRCNEPRHIARNCLMMEVDLAKRSWSAVTAHCKTAQYWTYEEADSGTEIGNLAQDLKI
DPADDPHTSFRFMQQPSSSLIRMRETDGLLTIGERIDREHICGQSPECLITFDVVTFSKE
KFQLIHVEVEVKDINDNSPQFPHNESYIEMSESAAVGTRFPLDIAVDQDVGPNYIENYYI
SFNSHFDIEVRSREDGVKLAELVLAKGLDREKDDSYTLQLSAADGGNPAKSGSVTVHIKV
LDFNDNSPVFDHSLLKVELYEDAPVGFLLCKLNAVDLDEGINGDIVYGFNDQVSAEIRQV
FQIDPSSGRLSLKGLVDYETKKSYELDIHAYDLGMNSVPAVCKVIVDIVDVNDNAPEISI
KPMTSISAGVAYITESAAEDSFVALVSTSDRDSGANGYLQCSLQGHEHFKLQEAYGYSFM
IVTTTTLDREKISEYNLTVIAEDLGSPPFKTIKQYTIRISDENDNAPLFSKPVYEVSVLE
NNVPGSFITTVVARDRDLGQNAKVTYKLIDAEVYGGVPLSTFVSVDAVSGSIYSVRSFNY
ELIKQIEMTIQASDEGSPQLSTTALIRVKIVDQNDNVPLIMHPILQNGFADVNLPNNAPP
GYLALQIKARDADEGMNAELSYRILQDHQMLFTMNKQTGDIALKNGLTYIAGDSLKVIIE
VSDNGRHTLSSTATLNFIVTETSPSDEPIVVILQSRDEEHPQWDISLVFVIMLGGSCVLV
LMAIVAVAISCKDNKTGRNYDNKKDLNHRGFETNPFKINSSQKDASIYSGSTLVNGQIAR
SEDRENSKCLSANEKRGHLETKICMPSSSLNQNPFQSVSSWQEQTRFKLSGIAYTDQMSA
KDSGKGDSDFNDSDSETSGDGSRRILTTCTPLQNDTFHSRNVSVPNL
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atggcttacagagcattgattgccacagaggcatcaaactatgataaagtaaaggaagct
attctctcatgcctcgggatcacggaggaaacataccggcgccgcttccgggaataccag
ctgtccaaggggatgcggccccgggttgcaggacagtatcttatggatcagtgcacccgg
tggctgcagccggaagaacatacaccccaagaactggtgcagaagattgtaatagagcag
ttcgcgtctgtactaccgccaggaaatcgagagttgattaaaaggaatcgacctaccact
atcgaggatgccatcatcctggcggaggcatgtgaagacgcgaacgaaggcgccgtttca
ggccccactcctgcccctaaactaactcggaccaaccagccaatgaagcccagagggggt
aaccagaccttcagaccatggaggctgaggttaaccccatcttgggcgagagaaaaatcc
cctaacctgccggtcattgactcgcaggacagacagactccgttggcgcttcctacccca
gtgtgctatcggtgtaatgagcccagacatattgccaggaattgtctgatgatggaggtg
gacctggcgaaaagatcctggtcagcagtaacagcgcactgtaaaacagcacaatattgg
acctacgaagaagctgactccggaactgagatcggaaacctagcacaggatttaaagatc
gacccagcggacgacccccacacaagttttcgcttcatgcaacaacccagctcttctctg
attcgaatgagagagactgacggactgcttaccatcggggaaaggatcgaccgggagcac
atctgtgggcagtcccctgaatgtctgattaccttcgacgtggtcaccttttccaaagag
aagtttcaactgattcatgtggaggtggaagtcaaggacattaatgacaactcgccgcaa
ttcccacacaatgaaagctacatcgagatgtctgagagtgctgcagtaggtactcgattt
ccattagacattgctgttgaccaggatgtgggccccaactacatcgagaactactacatc
tcgtttaacagtcacttcgacattgaagtgcgcagcagggaggatggggttaaacttgct
gagcttgtgttggctaaaggactggacagagaaaaagatgattcttacacacttcagctg
tcagctgcagacggaggtaacccggcaaagtcaggttcagtaactgtgcatatcaaagtg
cttgactttaatgataacagcccagtgtttgatcacagtctgctcaaagtggagttgtat
gaagatgctccagtggggttcctcctgtgcaagttaaacgctgttgacctcgatgagggt
ataaatggagacattgtttacggctttaatgatcaagtgtctgcagagatccgacaagtc
tttcaaatagacccctcttcgggacgtttaagcctaaaaggtctcgtggattacgagacg
aagaaaagttacgaactggatatccacgcatacgatttggggatgaactctgtcccagct
gtttgtaaagttatagttgacattgtagatgtaaatgacaacgctcctgagataagtatt
aaaccaatgacatctatcagtgcaggagttgcctatataactgaaagtgccgcggaagac
agctttgtcgctctggtcagcacctcggacagggattcgggtgcaaatggctacctacag
tgcagcctccaaggacacgaacatttcaaactgcaggaagcttacgggtacagcttcatg
attgtcaccacaacaacccttgatcgagagaagatttcagaatacaacctcacagtgatt
gctgaagacctggggtctcctccatttaaaaccattaaacagtacaccatcaggataagc
gatgaaaacgataacgcgcctcttttcagcaagccggtttacgaggtttcggttctagag
aataatgttccgggctcgttcattaccaccgtggtggcccgagatcgggatctgggtcaa
aatgctaaagtcacttacaaacttatcgatgcagaagtatatggcggtgttcctctgtct
acctttgtgtccgtggacgcagtctcagggtcgatatattctgtaagatctttcaattac
gaattaattaaacaaatagaaatgacaatccaagcaagtgacgaaggatctccacaacta
tcaaccactgctctgatcagggtaaaaatagtagatcaaaatgataatgtgcctcttatt
atgcatcccattttacagaatggctttgctgatgtaaacttaccaaataacgcaccgccc
ggttacctcgctctccagatcaaggcaagggatgctgacgaagggatgaacgctgagctg
tcctacagaattttacaagaccaccaaatgctattcacaatgaacaaacaaacgggtgac
attgcacttaaaaatggactaacctatattgctggggattctttgaaagtgatcattgaa
gtaagcgataacggaaggcacacactttcatccactgctactcttaacttcattgtaact
gagacatcgccttctgatgaaccaatagtggtgattctacaatcgagggacgaggagcat
cctcaatgggatatttcactagtgtttgtcattatgctaggcggcagctgtgttttggta
ttgatggcaattgttgctgttgcaatctcctgcaaagacaataaaacaggaagaaactac
gataacaagaaagacttgaaccacagagggtttgaaacaaatccatttaaaataaatagc
tcacaaaaagatgcatcaatatattctggatcaacactggtaaatggccaaattgcacgt
tctgaagatagagaaaactcaaagtgcctatctgcaaatgagaagaggggacatttagag
accaagatttgtatgccaagttcatccctcaatcaaaaccctttccaatcagtttcatcg
tggcaagaacaaacccgtttcaagctgagtggcattgcatacactgatcagatgagcgca
aaggacagtggcaaaggtgacagcgacttcaatgacagtgattctgaaaccagcggagac
gggtcgaggagaatcctcaccacatgcacaccacttcagaatgatacatttcactctaga
aatgtcagcgttcccaacctatga
DBGET
integrated database retrieval system