Acipenser ruthenus (sterlet): 117406593
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Entry
117406593 CDS
T07327
Name
(RefSeq) POU domain, class 2, transcription factor 1-like isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117406593
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
arut03000
]
117406593
03021 Transcription machinery [BR:
arut03021
]
117406593
Transcription factors [BR:
arut03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
117406593
Transcription machinery [BR:
arut03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
117406593
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
DUF3638
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
117406593
NCBI-ProteinID:
XP_033866617
LinkDB
All DBs
Position
8:53137550..53173102
Genome browser
AA seq
764 aa
AA seq
DB search
MRVQEQTSFENAHQDDMQESRMSNPSETSKPAMESADGSTDIYTTGYGPLQHLICWDVLA
AGSKLASSQTNGLDFQRQSVQTSAITNAHAQALLHQVHLAGASLQAASQTVNFQLTLTPA
QQQLLLQQAQAQLLAAAVQHSANQQHNATGATISASAATPMTHIPLSQPIQITPDLQQLQ
QFQQQNLNLQQFVLVQPGHPIATQLQPAQFIISQTPQGQQSLLQAQNLLTQLPQQSQANL
LQSQPSITLTAQPATPTRTIAATPIQPLPQNQMTPKRIDTPSLEEPSDLEELEQFAKTFK
QRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAENL
TSDQALSSPSALNSSGMGIEGLNRRRKKRTSIETNIRVALEKSFLEQNQKPTSEEITMIA
DQLNMEKEVIRVWFCNRRQKEKRINPPSSGSMSSTPIKAIFPNPATLVPSTASLVTSSTP
TTLTVNSLLPITSTAVTNIGFTGMRDTDTSAILQQLYAYYHGTTGIGSATNTASVISSAP
VASSAVNSPSLSPSPTSLPMSATESVSTHETSTTTQASTAMSSPLGTSQVMVTASGLSAA
LQGAATQLPANAGLAAMAAAAGLNPGLMSSQFAPGGALLSLNPGTFGSALNPALLSNSTL
IQALASGGSLPITSLDASGNLLFANANAGGNLVTAPLFLNPQNLSLLTSNPVSLVSAAAA
SAGASAQALNLQVTSAVAESNQNVVTSAGGAAAASTITTASKAQ
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgagagttcaggagcagacttcttttgaaaatgcacatcaagatgacatgcaagaatca
agaatgagtaatccgtcagaaacgagtaaacctgcgatggagagtgctgatgggagcaca
gatatatatacaacaggatatggtccactacaacatctaatttgctgggatgtcctggct
gcaggcagcaaacttgcaagttcccaaacaaatggattggactttcagagacagtctgtg
caaacaagtgcaatcactaatgcacatgcacaggcattacttcatcaggtccatcttgca
ggagcaagtttacaggctgcttctcagacagtaaatttccagctaaccttgacgcctgca
cagcagcagttactactccaacaagcacaggctcagctgctggcagcagcagtccaacac
tctgccaatcagcaacataatgccaccggggcaaccatctctgcgtccgcagctactcca
atgacacacatacccctttcacagcctatccaaataacaccagacctgcagcagcttcag
cagtttcagcagcaaaacctgaatctacagcagtttgtgttggtgcagccgggacaccca
attgcaacccagttgcaaccggctcagttcattatatcacagactccgcaggggcagcag
agtctcctgcaagctcaaaatcttttaacacaactacctcagcaaagccaagctaacctc
ctgcagtcacaaccaagcatcaccctcactgcacagccagctacgccgacgcgcacaata
gcggcgacacccattcagccacttccacagaaccagatgacaccaaagcgcatagacact
cccagtttagaggagcccagtgatctggaggagttggagcagtttgctaaaactttcaaa
cagaggagaatcaaactgggattcactcagggtgatgttggacttgctatggggaaactg
tatggaaatgattttagtcaaacaacaatctctcgctttgaagccttgaacctcagcttt
aaaaacatgtgcaagcttaaacccttgcttgaaaagtggctaaatgatgcagagaatttg
acatctgaccaagctttgtccagcccaagtgccctgaactcctcaggaatgggaatagag
gggctaaatcgcaggaggaagaaacgcaccagcattgagaccaacatacgagtggcctta
gaaaagagttttctggagcagaaccaaaagcctacctctgaagagatcacaatgatagct
gaccagctgaatatggagaaggaggttatccgtgtctggttctgtaatcgacggcaaaaa
gagaaaagaatcaatccgcctagtagtggcagcatgagcagcactcctattaaagcaatc
ttcccaaatcctgctacactggtgcccagcactgctagccttgtgaccagtagtacaccg
actacactgactgtaaactcacttctgcctataacaagcactgctgtaactaatattggc
ttcacaggtatgagggacacagatacttctgcaatattgcaacaactttatgcttattat
catggcacaacaggaattgggtctgccactaacacagcatcagtgatctcatccgcaccg
gtcgcttcctcggctgtgaactcgccttctctcagcccttcccctacttcattacctatg
tcagccacagaatcggtcagcacacacgagaccagtaccaccacacaagcatccactgcc
atgtcgtctccactgggtaccagccaggtcatggtgacagcatctggactgtcagcagct
ttgcaaggagcagccacgcagctgcctgctaatgcaggattggcagctatggcagcagca
gcagggcttaatcctggtctgatgtcctctcaatttgcaccaggtggtgccttactaagc
ctcaatccaggaacatttggcagtgctttaaacccagcgttgttgagcaacagtaccctt
attcaagctcttgcatctggtgggtcccttccaataacctctctggatgccagtggaaat
ctcttgtttgctaatgcaaatgcagggggtaaccttgtgactgccccattgttccttaac
ccgcaaaacctttctttgctcaccagcaacccagtcagcctggtttctgcggctgctgcc
tctgcaggcgcttctgcacaggccctgaacctccaagtcacctcagctgtggccgaatca
aaccagaacgttgtcacttctgcaggtggggcggctgctgcatcaaccatcactaccgcc
tccaaggcccaataa
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