Acipenser ruthenus (sterlet): 117406678
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Entry
117406678 CDS
T07327
Name
(RefSeq) WD repeat-containing protein 3-like
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117406678
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
arut03009
]
117406678
Ribosome biogenesis [BR:
arut03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
117406678
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_2nd
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
WDR55
WD40_Gbeta
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Utp12
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_RIG_2nd
DSE1_N
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
ANAPC4_WD40
NBCH_WD40
Beta-prop_SCAP
Beta-prop_NOL10_N
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_VPS8
Beta-prop_WDR41
Beta-prop_SPT8
Beta-prop_DCAF4
ASA1
PEP5_VPS11_N
Beta-prop_WDR19_1st
Beta-prop_Aladin
CFAP251_N
WDR54
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_ACSF4
WD40_like
WD_LRWD1
Beta-prop_RSE1_2nd
Beta-prop_WDR75_2nd
Beta-prop_WDR35_TULP_N
PAC11
VPS11_N
Utp21
Motif
Other DBs
NCBI-GeneID:
117406678
NCBI-ProteinID:
XP_033866822
LinkDB
All DBs
Position
8:46961877..46978777
Genome browser
AA seq
938 aa
AA seq
DB search
MGLTKQYLRYAASAVFGVIGSQKANIAYVTLRGGERGRYVAVAACEHVFVWDIRKGEKVL
ILQGSKQEVTYLCPSPDGIHIAVGYEDGSIRIFSLLNGESNVTFNGHKAEVTVIKYDHLG
ARLVSGSKDTDVIVWDVVNECGLYRLKGHKDAITQALFLKTKNLLVTSSKDTFVKWWDLE
TQHCFKTMVGHCSEVWGLVLLSDEKRIISGSADSELRAWDINYLQEGKEMGEPEEKKTKG
LLGHSEEPEGEVDENPEERILSCQKAGSILREGRNRVVSMATDLNSKILACHGTDTLLEV
FRVLSDNEINRIMERKLKKAKKKAKQQAGEDEEEVVVDRSLQDEIQRISSIKASAKIRSF
DCFLSPNGDLKVALLLQNNTVEVFVLKTAGKTSECTKTARLTIGGHRTDVRTLAFSSDNI
AVLSASAETVKVWNRSTLQVIRTMACEYALCSLFVPGDRQIIIGTKNGKLQIFELSSGIL
LETVDAHEGALWSICLSPDQRGIVSGGADKMVKFWDFELVKDENSVQNSKRLTVNHKRTL
QLDEDVLCVRYSPNQRLLAVSLLDCTVKLFYTDTLKFFLSLYGHKLPVLCLDISHDSALI
ATGSADRNVKIWGLDFGDCHRSLFAHDDSVMFLQFVQKTHLFFTAGKDKKIKQWDADKFE
HIQTLEGHHREVWCLAVSPSGDHIVSSSHDKSLRLWERTREPIILEEEKEMQREAEFEES
VGKGDEPVVPGETTGEASLAGKKTIETIKAAERIMEALELYREESKKLEEHKTACEIAGK
QLPPPTMSTILIAFGNISPSRYVLAVIRKVKSSELEESLLVLPFSYVPDLLTLFNEYIQN
GLEVELICRCLFFLLRIHFGQITSNQMLLTVMDSLRTNTISRVKKIRDVLGFNMAGMQFL
QREIESKEDVTFFADATDRFEDKKRKRKKRERAILAIA
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atggggctgacaaagcagtatttgcggtacgccgccagcgcagtttttggtgtgatcggc
agccagaaagccaacattgcctatgtaaccctaagaggaggagagagggggcggtatgtg
gcagttgcagcctgcgaacatgtctttgtatgggatatacgtaaaggagagaaggttcta
attctccaaggtagtaagcaggaggtgacttatttgtgcccttccccagatggtattcac
atagctgtgggttatgaggatggatcgatccgcattttcagcctcctcaatggtgagagc
aacgtcaccttcaatggacataaggcagaagtcactgtcatcaaatacgatcatctcggg
gcacgactggtgtcgggatcaaaggatacagatgtgattgtgtgggatgtggtcaacgag
tgtggcttgtaccgactcaaggggcacaaagatgccatcacacaggctttgttcctgaag
accaagaacctcctagtaacaagctccaaagacacttttgttaaatggtgggatctggag
acgcagcactgttttaagactatggttggacattgcagcgaggtgtggggattggtcctg
ttgagtgatgagaagagaatcatctctggctcagcagacagtgagctcagagcctgggac
atcaactatctacaggagggtaaagagatgggggaaccagaagaaaagaaaacaaaagga
ctgctgggacactctgaggaacctgagggggaagtggatgagaaccccgaggagcgcatc
ttgagttgtcagaaagctgggtccatcctacgtgaaggaagaaacagagttgtttccatg
gcaacagatctgaattctaaaattttagcttgtcatggaactgacactttattggaggta
ttccgtgtactgtcagataatgagattaacagaataatggagaggaaactgaagaaagca
aagaaaaaggcaaaacagcaggctggagaagatgaagaggaagttgtggtggacaggtct
cttcaggatgagatccagagaatttccagcatcaaagcttctgccaagatcaggtcgttt
gactgtttcctgtccccgaacggagatcttaaggtggcgttactgcttcagaacaacaca
gtagaagtattcgtcctgaaaacagccggcaagacttctgaatgcaccaagactgctcgc
ctaaccatcggtggacaccgcactgatgtccgcaccttggcctttagctcagataacatt
gctgtgctttctgcctcagcggagaccgtcaaagtctggaacagatcaaccttgcaagtt
atccgaacgatggcttgtgaatatgcgctctgctcgctttttgttcctggagacagacag
atcataataggaactaagaatggaaagctgcagattttcgagttgtcctctggaattctg
ttggagactgtagacgcccacgaaggagcactgtggtcaatttgtctttctccagaccag
agagggattgtgtccggaggagcagacaagatggtcaaattctgggattttgaacttgtt
aaggatgagaactctgtccaaaacagcaaaagactgaccgtgaatcataagcgcaccctg
cagctggacgaggacgtcctgtgtgttcgctacagccctaatcagagactgctggctgtg
tccctgctggactgcactgtcaagctattctataccgacacacttaagtttttcctttct
ctctatggacacaaactgccagtgctgtgcttggatatatcccacgacagtgcattgata
gccaccggttcagcagatagaaatgtgaagatatggggtctggattttggagactgtcac
aggtcactttttgctcatgatgacagtgtcatgttcctgcagtttgtgcagaaaactcat
ctctttttcactgctggaaaagacaagaaaataaaacagtgggacgctgacaagtttgag
cacatccagactctagagggtcaccatcgagaagtgtggtgcctggctgtgagtcccagt
ggagatcacattgtgtcatcatcacatgataaatcactccggctgtgggagagaacaaga
gagccaatcattctagaagaggaaaaggaaatgcaaagagaggcagaatttgaagaaagt
gtgggcaaaggggatgaaccagtggttcctggggagaccacaggggaggccagcctggct
gggaagaagacaattgaaaccattaaagctgctgaacgaattatggaggccttggaatta
tacagggaggaaagcaagaagttggaagaacacaaaactgcttgtgaaatagcagggaaa
cagttacctcctcctacaatgagtacaatcctgattgcctttggaaatatctctccctct
cgctatgtactggctgttatcagaaaagtaaaatccagtgaattagaagagtctcttcta
gtcttgcctttctcttacgttcctgaccttctcactctcttcaacgaatacatccagaat
gggctggaagttgagctgatctgtcggtgcctctttttcctactcaggatccactttgga
cagatcaccagcaatcaaatgctattgacagtgatggacagtctcaggacaaatacaatt
tctagagtaaagaaaattagggatgttcttggattcaatatggcaggcatgcagttttta
cagcgtgagattgaaagtaaagaagacgtgaccttctttgctgatgccacagaccggttt
gaggacaagaaaaggaaaagaaagaaaagggagagagctattcttgcaattgcctaa
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