Acipenser ruthenus (sterlet): 117406941
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Entry
117406941 CDS
T07327
Name
(RefSeq) LIM domain only protein 7-like isoform X1
KO
K06084
F-box protein 20
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
117406941
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arut04121
]
117406941
Ubiquitin system [BR:
arut04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
117406941
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
PDZ_6
PDZ
PDZ_2
Motif
Other DBs
NCBI-GeneID:
117406941
NCBI-ProteinID:
XP_033867295
LinkDB
All DBs
Position
8:complement(57036372..57104342)
Genome browser
AA seq
1909 aa
AA seq
DB search
MEWRENSDVSCDLAYTEAQRWVEEITRKQFGCNDFRSALENGVLLCDLINKIKPGIIKKV
NRLSTPIAGLDNINVFLKACGRLGLKEAQLFHPGDLQDLSSRVTVKREETSRRLKNVLIT
IYWLGRKAQTDAVYNGPFLNLKAFEGLLGTALSKALEDCGSLKRSGRDSGYADSWYTDRG
ELLSLPASHRRDDSLDSLDSVGSRSASISSGATLKGSSEGCGSDLSESDSPFRMTENKDS
MSYRRIAVVEPKSSTQFNQFLPSKSSQSGYVPAPLRKKRVDRNEDNRRSWASPMFTESDG
SFSSGEELGPGHTSQNGQTSRDYPLPENQQAAYQYESGSDSEAEARQPDVVLDDLASRRF
QMNRSVSPANYAKPLHMSDAGCPRSGPLWLGFSSATLDQEVGSTSSLRQCGGSKVESGTP
ATGPFPLNDTCSYSEEEDDNSSPDVCKDDLYARKVGVVLLPTANVPYDKYLPKYWTPEED
QHVQKIKVGSQRRPWYRKFQGFRKWQSDSEEEDSDCEGNPFSASSPVSEQRKLETTMHLG
NLQRSEAAGPIPCESTSDVSRTRDQQSPCTLDHDSNDLELVEPPVSMPRVDAAAGRRIIK
CERSSFLSPLNQQDGKDAQEGLLPDLENDDMFTRRTGSFHSNVDLMRYETKGRQSAELPP
EPDVKIVTQPRRGEPVVPDIERDDMVFRKVNFNSQKKVRSPSGAPHVYHPVPIPEPWTLP
ANLQSKLLCQPNPPMPEEEEEEGEGRQYSIHPKTDDMSARKLGKVHPPQAVLPSPFVPTS
CSEQDLKKWEAIREGSRLRYKKRKMVERLLQRCSSADGSKSMSDVSEEAVANRQIRFEEL
QKIKSQLQEQDQQWQNDLTKWKNRRKSFTSDLVKKKEEREQIDQTVGRRVKTFKEMQEER
QDREQGIQSTELRAPSNRSLYASNEEVFTDEKPMSKTLRERSYTVEVDTPYSSQNSEVTR
STPAYNPQKDDATITATTSTSKAAQSNSSVSEAAGSQRTSQSPSEEQSSVSLYAHNSMDT
RPGVARVSASLPRSYQRPDSTRLTSIVAPRPFGTQSNRVSSLPRAVAMDSAHSQYNGDLD
SASQKTYSTSRYSQVMKMEDDGPSQSSSVLSSTEEGRTPSPKPAPSAQPRDELTSSHVIE
SNPDHPSSSAKTQYVASTSTSTIKVPEAKVTTQEQYSDMRISLNQKSNSGRDFGFIPTWS
NAGVFVKSIEPGSPSELCQMQVNDEILTVNGLKVSDMDFSQWKENMDTSVKHGTLVMDIR
RYGKNNWGRDLPSLPYKSHKTINMTSMDTTLVGSAEKVIHANSRDYTAYEPSEKTMKPDV
NRQPVNDAGSKDMNGGFREESVTMRHKESEPISLKNLQRRSQFFEQGGSESAISDLQVPS
ISTSSSRWAWDPEEERKRQEKWQKEQDRLLQEKYKQEQEKLNEEWMRAQQEAEKEGSKYY
EEECKILKVNTPISSSWDDQREEVQHLQEQERARRQHEEEEQERRRQEEEQHQQRLEEKR
RREEAEAQRQQAELRRQRDEEQRRQERERRQKEEEQTRREELRRKQEEEKEERQRQAAAA
AEKHRREMERARQEQEQQQQWLGESYEFSKILPDASEFAVSERAKSKSTSELDDVHSDTQ
VYGRPGGMAQWLQEEEVKRRQSAKVQRMVAASELETERQQILYQMKYADPGRASNKFAEG
SWTKDQSVSYAEQERQRILDEMKKKNQLLTDNSWIRQRSASVNREPASLTGTMRRGESLD
NLDSPRSNSLKQPPWVTNYTASSTSSVQDSSRYHPVVPPSNRSFIHTPSTTLPASLSTGS
MKTGSWGQTSSVSPTPSESISNTPRTPSQRSRSISGKKICTYCDTPLGKGAAMIIESLGL
FYHLNCFKCIACHSELGGSESGAEVRIRNSQLHCNSCYVKFKTGQPTNM
NT seq
5730 nt
NT seq
+upstream
nt +downstream
nt
atggagtggagagagaactccgatgtcagctgtgatttggcttacactgaagctcagcgt
tgggtggaggagatcacaagaaaacagtttggatgtaatgattttcgatctgcactggaa
aatggagtcttgctgtgcgatttgatcaacaagattaaacctgggattataaagaaggta
aatagattgtctacaccaattgctggcttggacaacattaatgtgttcttgaaggcttgt
gggaggctaggcttgaaagaagctcagttgtttcatcccggagatctacaggatttatcg
agccgtgttactgtaaagcgtgaagagacaagcaggaggctaaaaaatgttttgatcaca
atatattggctaggtcgaaaagcacagactgatgctgtttataatggacctttcctaaat
ttaaaagcttttgagggattattgggaacagctttatcaaaggctcttgaagattgtggc
agtttgaaacgcagtggcagagacagtgggtacgctgatagttggtacacagacagaggg
gagctgctatcccttccagccagtcacagaagagacgattctttagatagtttggactcg
gtgggatcaaggtcggcgagtatttcttcaggcgcaactttgaaaggcagcagtgagggt
tgtgggagtgacctgtctgagtccgactcgccattcaggatgacagaaaacaaggacagc
atgtcatatcgccggattgctgtggtagaaccaaaaagctctacgcaatttaaccagttt
ctacccagtaaaagcagccagtcgggatatgtaccagccccactgagaaaaaaacgggtt
gataggaatgaagacaacaggaggagctgggcgagtcccatgttcacagaatctgatggg
tccttttcaagtggagaagagttgggtcctgggcacacctctcagaatgggcaaacttcc
cgtgactaccctctcccagaaaaccaacaggcagcgtaccagtatgaaagcgggagtgac
tccgaggctgaagccaggcagccagatgtagtcttggacgatttggcgagccgcaggttc
caaatgaacagatctgtgagccctgcaaactatgcaaagcctttgcacatgtcagacgct
ggctgtccaaggtccggcccactgtggttgggcttttcttctgcgacacttgaccaagaa
gtggggtctacaagtagccttcggcagtgtggtggctccaaggtggaaagtggcacacca
gccacaggcccgttccccttgaatgacacctgcagttactcagaggaggaagatgacaac
agtagccccgatgtctgcaaggatgacttgtatgcacgcaaagtgggcgtggtactgctg
ccgacagcaaatgtgccttatgataagtatcttcctaaatattggacccctgaggaagac
cagcacgtacagaagatcaaagtgggatctcagcgcagaccatggtacaggaagttccaa
ggtttcagaaagtggcaatccgattcagaggaagaggattctgattgcgaaggcaatcct
ttcagtgcttcctctccggttagcgagcagcggaagctagagactaccatgcatcttggt
aacctgcagagatctgaggctgcagggcccataccctgtgaaagcacgtctgatgtcagt
cgtacaagagatcagcaaagtccatgcactttagatcatgactcgaatgatttagaatta
gtggagccccctgtcagtatgcccagagttgatgccgctgctggtcgcagaatcataaag
tgtgaaagaagctcttttctaagccctctcaaccagcaagatggtaaagatgcccaggag
ggcttgcttccagatctggaaaacgatgacatgttcacccgcaggacaggctccttccac
agcaacgtggacctgatgcgttacgaaaccaaaggcaggcaaagcgctgagctcccaccg
gagcccgatgtcaagattgtcactcagcccaggcggggtgagcctgtggtaccagatatt
gagagagatgatatggtcttccgtaaagtcaacttcaactctcagaaaaaggtccgttcc
ccatcgggggcacctcatgtgtaccaccctgtccccattccagaaccttggaccctgcct
gccaatctccaatcaaaactgctttgccaaccaaatccacccatgcctgaagaggaagag
gaagagggggagggcaggcaatattcaatacatccaaaaacggatgacatgtctgctcga
aagctgggaaaagtacaccctccacaggctgtgctgccaagtcctttcgttcccacttct
tgtagcgaacaggacctaaagaaatgggaagcaatccgggaaggcagtagactgagatac
aagaaaaggaagatggttgagagactgctgcaaaggtgttctagtgctgatgggagtaaa
tctatgagtgatgtaagcgaagaagcagttgcaaaccgccagattagatttgaagaatta
caaaaaatcaaatctcagttacaagagcaggaccagcagtggcagaatgatctgacaaag
tggaagaatcgtcgtaaaagcttcacttctgaccttgtaaagaagaaagaagagagagag
cagatagaccagacagtcgggagaagagtaaagacctttaaagaaatgcaggaggaaagg
caggacagagagcaggggattcagagcactgagctgcgtgcaccaagcaacaggagcttg
tacgcctccaatgaagaagtgtttactgatgaaaagcccatgtcgaaaaccctgcgtgaa
agaagttacacggtcgaagtggatactccgtacagttcccagaacagtgaggtgacccgt
tctacccctgcttataatccacaaaaggacgacgctactatcacagccaccacctccaca
agcaaggcagcccagtccaacagcagtgtcagtgaagcagctggatcccagcgcacgtct
caaagcccgtcagaagaacagagctctgtttctttgtatgcacacaattcaatggatacc
agaccgggggtagctcgggtttcggcttctctccccagaagctaccagagacccgatagt
actcgactgacctccatcgttgcaccgagacctttcgggacccaatcgaacagagtttct
tctcttcccagagctgttgcaatggatagtgcacatagccagtacaatggggacctggac
agtgcttctcagaagacttacagcaccagcagatacagccaggtcatgaagatggaagat
gatgggccctcccagtctagctctgtgctgagcagcaccgaggaggggaggactccatct
ccaaaaccagcaccttctgcacagcctcgagacgagctgacaagcagccatgtcattgaa
tcaaatcctgatcatccctccagctctgcaaaaacccagtatgtcgcaagcaccagcaca
agcacaataaaggtgccagaagcgaaggtcaccacacaggagcagtacagcgatatgaga
atcagtctgaaccagaaatcaaacagcggtcgggactttggcttcattcccacctggagc
aatgctggtgtctttgtgaagtccattgagccaggcagcccatctgaactctgccagatg
caggtcaatgatgaaatcctcacagtaaatggcctgaaagtgtctgacatggacttcagt
cagtggaaagaaaacatggacacatctgtgaaacatggaacccttgtgatggacatccgc
agatatggcaagaataactggggcagagacctaccttccctaccatataaaagccataaa
accatcaatatgaccagtatggatacaacacttgtaggttcagctgaaaaggtaatccac
gccaactccagagattatactgcttatgaaccttcagagaagaccatgaaacctgacgtc
aacagacagcctgtaaatgatgctggatctaaagacatgaatggaggattccgtgaagaa
tcggtaacgatgagacataaagaatctgagccaatttctttgaaaaacttacaaaggcga
tcacagttttttgaacaaggaggctctgagtctgccatatctgatttgcaggtcccttcc
atcagcacatcatctagccgctgggcctgggaccctgaggaagagagaaaacgacaggag
aagtggcagaaggaacaggaccgtttgctgcaggagaagtacaaacaagagcaagagaaa
ctaaatgaagagtggatgcgggcacagcaagaagctgaaaaagaaggctccaagtactat
gaagaggagtgcaagatactgaaagtgaatacccccatctcttcctcttgggatgaccaa
agagaagaggtgcagcacctccaggagcaagagagagcaagacgacagcatgaggaagag
gagcaggagaggagacgccaagaggaagagcagcaccaacagcgtttggaggagaagagg
agacgtgaagaagcagaggcgcaacggcagcaagcagagctgcggagacagagggatgaa
gaacagaggcgccaggagcgggagaggaggcagaaagaggaagagcagacacgcagggag
gagctcagacgaaagcaagaggaggagaaggaagagaggcagcggcaagcagcagcggca
gctgagaaacatcggcgagagatggagagagccaggcaggaacaggaacagcagcagcag
tggcttggtgaatcctatgaattttctaaaatccttcctgatgcatcagagtttgctgtt
tcggagagggccaaatcgaaatccacttcagagcttgatgatgtacattctgatacccag
gtatatggcagacctggtggcatggcccagtggctgcaggaggaggaagtgaagcgaagg
caaagtgcaaaggtccaaaggatggtggcagcatcagaactggaaactgagagacagcaa
atactttatcagatgaaatatgctgaccctgggagagccagcaacaagtttgcagaaggc
tcctggacgaaggatcagtctgtttcttatgcagagcaggaaagacaaaggatccttgat
gagatgaaaaagaagaaccaacttttgactgacaacagctggataagacagcgcagcgcc
agcgttaatagagaacctgccagtctgactggaacaatgaggagaggtgagtctctcgac
aatcttgattctcctcgatcaaactccttgaagcagcctccgtgggtaaccaattatact
gcctcctccacctcctcggtgcaggactccagtcgatatcatcctgtggtgcccccctcc
aaccggtccttcatacacacgccttccaccaccttacctgcctccttatccactggctca
atgaagacaggctcctgggggcagacttcgtctgtgtctccaactccatctgagtccatc
tcaaacactccacgcaccccttcacaacgcagcaggtcaatcagtgggaagaagatctgt
acgtactgtgatacacctttgggcaaaggagctgctatgatcatcgagtctctgggtctg
ttttatcatttgaattgttttaagtgtatcgcctgtcactctgaactcgggggctcagaa
tctggagctgaagtcagaattcgaaacagtcagctccactgcaacagctgctatgtcaag
tttaaaactggacagcccactaatatgtga
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