Acipenser ruthenus (sterlet): 117407061
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Entry
117407061 CDS
T07327
Name
(RefSeq) bromodomain and WD repeat-containing protein 3-like
KO
K11798
bromodomain and WD repeat domain containing protein 1/3
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arut04121
]
117407061
Ubiquitin system [BR:
arut04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
117407061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Bromodomain
WD40_CDC20-Fz
EIF3I
Beta-prop_EML_2
Beta-prop_EML
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF12
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
117407061
NCBI-ProteinID:
XP_033867527
LinkDB
All DBs
Position
8:3551774..3573236
Genome browser
AA seq
2310 aa
AA seq
DB search
MADTTAKSQNVSFLESELYYLIARFLSKGPCRKAAEVLVGELEDYELLPKRLDWEGNDHP
RTYEDLVRANKHVAPDHLLRICQQIGPLLDKEVPSCVAGVRSLLGAGRQCLLRTAKDCKN
VVLKGPDFAALHRGRPPELPVNYRGPPNLVEVYRGRELTGADRFSSICPVSSYQHMKMRR
RILGHLSAVYCVAFDRTGQRIFTGSDDCLVKIWSSFDGSLHSTLRGHSAEISDLAVNFEN
TLIAAGSCDKVIRVWCLRTCAPVAVLQGHSGSITSLQFCPMAKGSVRYMVSTGVDGTVCF
WQWDANNMTFNNRPHKFTERPRPGVQMICSSFSAGGMFLATGSTDHVIRMYFLGSGSPEK
IAELESHTDKVDSIQFCHTGDRFVSGSKDGTARIWNFQQHRWRSILLEMACTLEGPVTTP
DEEKFFKPKVTMIAWDRHDNHVITAVNTHLVKVWHSYTGQLLHILKGHEDEVFVLEPHPF
DPRIVLSAGHDGNIFIWDITKGTKTRHYFNMIEGQGHGAVFDCKFSPDGQHIACTDSHGH
LLIFGFGCSKPYEKIPDQMFFHTDYRPLIRDANNYVLDEQTQQAPHLMPPPFLVDVDGNP
HPTKYQRLVPGRENFADEQLIPQLGYVATSDGEVVEQVISQQTSDHDEQVRELNVLDGII
RQLQEQQDQRSRESAALPNGPQNQEGTPRRVFRNPSVEVQSSPNVGLRRSGQVEGVRQMH
QNAPRSQMATERDLQAWKRRVVVPELSPYILKRQEEYRLAKGGEELVLYTTEKKRKSLHG
SFKDDSDDGRPRTKRKTRPRRPKQTSYRTRNTAVDQFVEFSCEEGEETESSLSEEENEIT
DSGAFWISNEEEEAEEEWKSESNSSSNSSSEYSDWTADAGINLQPPTRTSSRRRARRKLS
SSEEEESAEEHCAEAPKPKKPKERTPKGPSQRPALNREISNEFRPSAWITDVIPRKSPFV
PQMGDEVIYFRQGHESYVEAVRRNNLYDINLDKQPWKKLELRDQEFVKITGIKYEVCPPT
LCCLKLSLIDHGTGKLTDKSFSVKYHDMPDVIDFLVLRQCYEEARQRDWQPNDRFRSVID
DAWWFGTILCQEPYQPEYPDSHFQCFKVQWDNNEIEKVSPWDVEPIPENAQQPDQIGGGV
PVTPEELSRLMYQPQKGEWGLVRSMDEECERIISGIDQLMVLDFVTPFAAPVDILTYPAY
CTVVAYPTDLGTIRMRLVNRFYRKISALVWEVRYLEHNARTFNVPGSSIARSAKKITDIL
LKFINKQDCTNILELYGTMDEETSSEEQEQNDNDAPGTSTGRRLRQCRSGKRSTVEVTYD
VDAWKQQCKSLLEYIFQCEDSEPFRHPVDENEYPDYLNIIDTPMDLETVRKVLDEDRYEN
PTELCKDIRLIFSNAKAFTPNKRSKIYSMTLRLSAFFEERIRSIISDYKTAVQHSAKLRR
SQRFRKKLQHREASVSSSRASSPERKQKQVKLQEKVEVVFSKKSTKSTKASCILKSTRWS
GGTSTSGDSSSENSESSSASSVSFKNNMKARAATSGDSSEESSFESENESLSSGSGENEG
NAAKPSGSTHLYQNGATNARNTSRRVTRNNAALDRRKQENGHSRRACRNQPRKSESSSEK
EENSPPTSEEEEEEEEEEEPSLARRKAPRRTAAAAAVNIMAMADEEEESPSEGESRKGSS
RDLKKKSPLQSRSAGVESSRRNAEAQGSGHKRPHRKTRKTKQEVSSEAEEGSSSESDASK
RSPKRKMPPRSRRKKPEKDQVEDEWEVGEGHGRTVAATRAQKKALLKHEKSVTDNKNGRR
ESENEEFSPSSNRQADVERKLPPRTAASKNKRTIHSEEESESSKGYESSPNRKSKSSTAS
EDTESESEGTNSERQNFPKRTLRSRTTVTTSRKKVSNRDSSTSQSESTGHEQRRRNLRHR
TTSGTRLTPGSEGKWDSIRKLPHRTAATMKKYTEESEGTGFESETELQNGNCNNRKLPSR
AASKANTESDTREEGPPSELEENTVVGRKKLTQQSSARKKYDPGSSEEERAQSEGQKKKI
QKRTKLQPPSSKRCIWDDGYSEEERSQSEDEVGAHKSKSPHRTAFKKKNIRADSEANSKS
ERNGRKMSAVSTRKRKLLSDSEESAESDRKENHASKKSFRRAPVTESEAEDQDRREASSE
DEEWQGSVVGKSRERQSSGVSRKRRLPRKSIRKRKRDSSSESESNSSDSSSSESESLNLG
TGSGSDSMDNSVGSLERNPNKRKGKSAANSQGAVRKSKRKQVKFAVHDKEDDDGDDDDDE
FVPGCGKSQRVSLIRTRNQGRQTVKYADFE
NT seq
6933 nt
NT seq
+upstream
nt +downstream
nt
atggccgacacaacggccaaaagtcagaatgtatcgttccttgaatcggagctgtattac
ctgattgcgcgttttttatcgaaaggcccttgtcggaaagcggcagaggtcttggtgggg
gagctagaggattacgagcttcttccaaaacgattggactgggaaggcaatgatcatccc
agaacgtacgaagatttggttcgtgcgaacaaacatgtggcgcctgatcatttgctgcgg
atttgccaacaaatcggcccacttctggacaaagaagttccatcatgtgtggcaggggtc
cgatccctgctcggtgcagggagacagtgtttactccgaaccgccaaagattgcaaaaat
gttgttttgaagggcccagattttgcagcgctccacagaggaaggccaccagagttgcct
gtgaactacagaggccctccaaatctggtcgaggtttatcgtgggagagagctgacggga
gcagaccgttttagttcaatatgtcctgtgagctcctaccaacacatgaagatgcgcagg
agaatccttggtcatctttcagctgtttactgtgttgcatttgaccgcactggacagagg
atttttactggctctgatgactgcctggtgaagatctggtcctcctttgatggcagtttg
cactctacactgagaggccattcagcagagatttctgacctggctgttaactttgagaac
actctcatagctgcaggcagctgtgacaaagtgatccgagtgtggtgcctccggacctgc
gccccagtagctgtgctgcagggccattctgggtccattacttccttacagttttgtcca
atggctaaaggctctgtgagatacatggtgtctactggagtggatgggacagtctgcttt
tggcagtgggatgccaacaacatgacatttaacaatcgcccacacaagtttacagaaaga
cccagaccaggagtacaaatgatttgttcttcatttagtgctggtggcatgttcttagca
actggcagcaccgaccatgtgattcgaatgtattttcttggcagtgggagccctgagaaa
attgcagaacttgagtcgcatacggataaagttgacagcattcagttttgccacactggg
gacagatttgtgagtggcagcaaagatggaacagctcgaatctggaattttcagcagcat
aggtggagaagcattttgctggaaatggcttgcacattagaagggcctgtaaccactcca
gatgaggaaaagtttttcaagccaaaagtgacaatgattgcttgggatcgacatgataac
catgttatcacggctgttaatacccatctggttaaagtgtggcattcttacacggggcaa
ctgcttcacatcttgaagggtcacgaggatgaagtgtttgtgctggagccacatcccttt
gaccccagaattgtgctgtcggctgggcatgatgggaacatctttatatgggacataacc
aaaggcacaaaaacgcgtcactatttcaacatgattgagggccaaggtcatggtgctgtg
tttgactgtaagttctcaccagatggacagcacattgcctgcacagattctcatgggcac
ctgctcatatttggatttggatgcagtaagccttacgaaaagattccagaccagatgttt
ttccacactgattaccggccgcttattcgagacgccaacaattacgtcttggatgagcag
acccagcaggcaccccacctcatgcctccacccttcttagtggatgttgatggaaaccca
caccccactaaataccagaggcttgtcccgggaagggagaattttgcagatgagcaactg
attcctcaactgggatatgttgcaacaagtgatggcgaggttgtggagcaggtgatcagc
cagcagaccagtgaccatgatgaacaagtccgggagctcaatgtgcttgatggcattatc
agacagttacaggagcaacaggaccagaggagtagagagtcagcagccctcccaaatggg
ccacaaaaccaggaaggcacccctagaagagttttcagaaatccaagtgtcgaagtccag
tcctccccaaatgttggccttcgtcgtagtgggcaggttgaaggtgtgcggcagatgcat
cagaacgctccgaggagccagatggccacggagcgcgaccttcaggcctggaaaagaaga
gttgtggtgccagagttgtcaccctacatactcaagagacaggaagagtacagactagca
aaaggtggagaggagttggttctgtatacaacggaaaagaaaagaaagtccttacatgga
tcattcaaggatgattcggatgatggcagaccacgcacaaaaagaaaaacgcgaccacgt
cggccaaagcagacaagctatcgaacccgtaacactgcagtagatcagtttgttgagttt
tcttgtgaagaaggggaagagactgaaagctccttatctgaagaggagaatgaaataaca
gatagtggagctttttggatttctaatgaggaagaagaggctgaagaggagtggaaaagt
gaaagcaacagttcaagcaactcttccagtgagtactctgactggactgcagatgcaggt
atcaatctccagcctcccacccgcacctcctccaggaggagagcgaggcgcaagctcagc
agctcggaggaggaagagtccgctgaggaacattgtgccgaggctccaaaaccaaagaag
cctaaagaaagaacaccaaagggtccaagtcaaagaccagccttaaacagagaaatatca
aatgaattccgtccttctgcatggatcactgacgtcatcccccggaagtccccattcgtt
ccccaaatgggcgatgaggtgatatatttccgtcaaggccacgaatcttatgttgaagcg
gtgagaagaaataacctttatgacatcaaccttgacaagcaaccatggaaaaagttggag
ctcagggatcaagagtttgttaaaattactggaatcaagtatgaagtttgccctccgaca
ctgtgctgtctgaagctttctctcatagatcatggcacagggaagctgacggataaatcg
ttttctgttaagtaccatgacatgcctgacgtaattgatttccttgttttgcgacaatgt
tacgaggaagcaaggcaaagagactggcaaccaaatgaccgattcagatcggttattgat
gatgcgtggtggtttgggaccatcttatgtcaagagccatatcagccagagtaccctgac
agtcacttccagtgctttaaagttcagtgggacaataatgaaattgaaaaggttagccct
tgggatgtggaacctattccagaaaatgctcagcagcctgatcagattggtggaggtgtc
ccagtgacccccgaggaactgagcagactgatgtatcaacctcagaagggagaatgggga
ttagtaaggtccatggatgaagaatgtgaacgaattatcagcggcattgatcagctcatg
gttcttgactttgtgaccccctttgctgcccctgtggacattctcacgtatcctgcatac
tgtacagtagtggcatatcctacagatcttggtactatcaggatgaggcttgtgaacagg
ttttaccggaagatctctgctcttgtgtgggaggtgagatatcttgaacacaacgccaga
acgttcaatgtgccaggaagctcaattgcacgatcagcaaagaagatcactgacattctc
ctcaagtttatcaacaagcaagactgtacaaacattttggagctttatggcacaatggat
gaagagaccagttcagaagaacaggaacagaatgacaatgacgctcctggaacatcgact
ggaagaagactacgtcaatgccggagtgggaagagaagcactgtggaagtaacctatgat
gtagatgcgtggaagcagcagtgcaaatctttgctggagtacatctttcagtgtgaggac
tctgaacctttccggcaccctgttgatgagaacgagtatccagattacctgaatattata
gacacaccaatggacttggaaactgtgaggaaggtgttggatgaagaccggtatgaaaac
ccaacagagctttgcaaagatatccggttgatatttagcaatgcaaaagcctttacgcca
aacaagcggtctaagatctacagcatgactttgcgactgtctgcgttcttcgaggagcgc
atacgatcgattatctctgactataaaacagctgtgcaacacagtgcaaaactccgtcgc
agtcagagattcaggaagaaactgcagcacagagaagcttcagtctcgagtagtcgtgct
tccagtccggagagaaaacagaaacaggtgaaacttcaggaaaaagtggaagtggttttc
tccaagaagtctacaaaatcgactaaagcctcctgcatcttgaaatcaacgagatggagt
ggaggcactagcacatctggagactcctccagtgaaaactcggagagctcctccgcctcg
tcggtgtcatttaaaaacaacatgaaggcgagagcagcaacctcaggagacagctctgaa
gaatcatcgtttgagagtgaaaatgaatcgctgtctagtggctccggtgaaaatgaagga
aatgctgcaaaaccttcgggctccactcatctctatcagaatggtgcaactaacgcaagg
aacacgagcagaagggtgacgagaaataatgcagcattggacaggcgcaaacaagaaaat
ggacacagcagaagagcttgccgtaaccaaccgaggaagtctgagagcagctcggagaaa
gaagagaattctccacctacaagtgaggaggaggaggaggaggaggaggaggaggagccg
agtcttgctagacgcaaagctcccaggaggacagctgctgctgctgctgttaatataatg
gcaatggctgatgaagaggaggagtctccttcagagggtgaaagtcgtaaaggctccagc
agagacctgaaaaagaaatctccattgcagagccgatctgcaggggtggaatcatctcgg
cggaatgcagaagcacaaggcagcgggcacaaacggccacatagaaaaactagaaaaaca
aagcaggaagtcagttcggaagcagaagagggatccagttcggaaagtgatgctagcaaa
cgtagcccaaagcggaaaatgcccccacgatccaggaggaaaaagcctgaaaaggaccag
gtggaagatgagtgggaagttggagaaggccatggtcgtactgtggcagccacacgtgca
cagaagaaggctttactgaagcatgagaaatctgtcactgacaataaaaatggaagaaga
gaatctgaaaacgaagaattctctccctctagtaatcggcaagcagatgttgaaaggaag
ctgccccctcgaactgcagcaagtaagaataaacgcacaatacattctgaagaggaatct
gaatcaagcaaggggtatgaaagcagtccgaatagaaaaagcaaatcctccacagcctcg
gaggatactgaatcggagagtgaaggaacaaactcggagagacagaactttcccaaaaga
acgctccgtagccgcaccactgtgaccacttcaagaaaaaaagtatcaaacagagactca
tcgacatcacaatctgagagtacagggcatgagcaaagaaggagaaatctgcgccatcga
accacctcagggacacgattaacaccaggctctgaagggaaatgggactcgataaggaag
ctgccccatcgaacagctgccacgatgaagaaatacacagaggaatctgaaggtactgga
ttcgagtccgagacagaacttcagaatggcaattgtaacaacaggaaactgcccagtcgg
gctgccagcaaagcaaatacagagagtgacacaagagaagagggaccaccgtctgagctc
gaggagaacaccgttgttggcagaaagaaacttacccaacaaagctctgccaggaaaaag
tatgatcctggatcatctgaagaagagagagctcagtctgaggggcagaagaaaaaaata
caaaagaggacaaaattgcagccgccttcttctaaacggtgtatatgggacgacgggtac
tctgaagaagaaagatcgcagtcggaggatgaggtaggggctcacaagagcaagtctcct
catcggactgcttttaaaaaaaagaacattcgagcagattcagaggcaaactcaaaatcg
gagaggaatggcagaaaaatgtcggcagtctcgactagaaaaagaaagctcttaagtgat
tcagaagagagtgctgaatctgacaggaaggagaatcacgcaagcaaaaaaagcttcagg
agagcccctgtaactgagtctgaagcagaggaccaagataggagggaggcgtcgtctgag
gatgaagaatggcaaggtagtgtggtggggaagagtagagagaggcagtcatcgggggtt
tcaaggaaaaggaggcttcccaggaaaagcatcaggaaacggaaaagggattccagcagc
gagtccgaatcaaacagcagtgattcctccagctcagaatcagagtccttaaatttagga
acaggatctggatcagattccatggacaacagtgttggtagcttagaaagaaacccaaat
aagagaaaagggaaaagtgcagccaacagccagggggctgtccggaagtctaaaagaaaa
caagtaaaatttgcagtacatgacaaagaagatgacgacggtgatgatgatgatgatgaa
tttgttccaggctgtggaaagtcacagagagtctctttgatcaggacaagaaaccaaggt
agacagactgtcaaatatgctgactttgaataa
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integrated database retrieval system
