Acipenser ruthenus (sterlet): 117407095
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Entry
117407095 CDS
T07327
Name
(RefSeq) exosome complex component RRP43-like
KO
K12586
exosome complex component RRP43
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117407095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arut03019
]
117407095
Messenger RNA biogenesis [BR:
arut03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
117407095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
117407095
NCBI-ProteinID:
XP_034778532
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Position
8:14838436..14847232
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AA seq
276 aa
AA seq
DB search
MAAGFKTVEPLDYHRRFLKENCRPDGRELGEFRTTTLNIGSITTADGSALVKLGNTTIIC
GIKGELAAPPVDAANKGYIVPNVDLPPLCSSRFRPGPPGEQAQAASQFIADVIENSDVIQ
KEDLCIVKGKLSWVLYCDIMCLDYDGNILDACTIALLGALKNVRLPEVHINEETDLAEVN
MKQKNPLNITKHPVACSFAIFDDTIIIVDPTVEEENLSTGMITVVTDEDEKLCAVHKPGG
TALSGEKLQDCISRAITRNKEVNKLLNEVLISVKPK
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggcggctggtttcaagacggtagaacctctggactatcacaggcgttttttgaaagaa
aactgcaggccagatggaagggagctgggagaattccgaaccaccacattgaacattggt
tctattacaactgctgatggttcagcgttggtgaagctggggaacaccaccatcatttgt
ggcattaaaggagaacttgcagctccaccagtagatgcagctaataagggctatatagtt
cctaacgtggatctgccacccctgtgctcgtcgaggtttcgccctggtcctccgggagaa
caggcccaagccgccagtcagttcattgctgatgtcattgaaaattcagatgtgatacaa
aaagaagatctttgcattgtaaaaggcaagctgtcttgggtcctgtattgcgatataatg
tgcctcgattatgatggaaatattctggatgcctgcacaatagctttactgggagctttg
aaaaatgtccggttaccagaagttcacataaatgaagaaactgaccttgcagaagtgaat
atgaagcagaagaacccattaaatatcacaaaacatccagttgcttgttcatttgccata
tttgatgacacaattatcatagttgatccaactgttgaggaggaaaacctgtcaacagga
atgattacagtagtaacagatgaagatgagaaactttgtgcagtccacaaaccaggagga
actgccttatcaggtgaaaaactccaagactgcatcagtcgagcaataacaagaaacaaa
gaagtgaacaaactgctaaacgaagttttaatcagcgtgaaaccaaaataa
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