Acipenser ruthenus (sterlet): 117407287
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Entry
117407287 CDS
T07327
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1 isoform X1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117407287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arut04121
]
117407287
Enzymes [BR:
arut01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117407287
Ubiquitin system [BR:
arut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117407287
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
RING_XB3-XBAT31
TRIM_CC
PRY
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
zf-RING_2
zf-C3HC4_3
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
117407287
NCBI-ProteinID:
XP_033868003
LinkDB
All DBs
Position
8
Genome browser
AA seq
686 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFSCAHRILISHCTPNEPVESISAFQCPTCR
YVITLNQRGLEGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDGNAMTTSSEKVQC
QFCDQDPPQDAVKTCVTCEVSYCEDCLKATHPNKKPFTGHRLIEPIPDSHLRGLMCLEHE
DEKVNMYCVTDEQLICSLCKLVGRHRDHQVAALSDRYEKLKRPPGKFFSQRNEQEASDQQ
GLDTNLSNLIKRNNELETLMGKLIQTCQHVEVNASRQESKLIEECDQLIDIIQQRRQIIG
TKIKEGKVVRLRKLAQQIGNCKQCIDKSSSLITQAEQTLKENDHARFLQTAKNITERVSM
ATASSQVLIPQINLNDTFDTFALDFSREKKMLESLDYLTAPNPPGIREELCTASHDTITV
HWTSDDEFSIVSYELQYAIFTGQANVVSLCNSADSWMIVPNIKQNHYTVHGLQSGTKYIF
IVKAINQAGSRSSEPGKLKTNSQPFKLDPKSAHRKLKVSHDNLTVERDETSSKKSHTQER
FTSQGSYGVTGNVYIDSGRHYWESLIGGSTWYAVGISYKSAPKHEWIGKNSASWVLCRCN
NSWVVRHNSKELPIEPSPHLRRVGVLLDYDNGFLAFYDAVSSQHLYTFDISFAQPVCPVF
NVWNKCLTVLTGLPIPDHLECTELQP
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggaaacactggagtcggagctgacctgccctatctgtctggagctcttcgaagatccg
ttgctgctgccttgtgctcacagcctctgtttcagctgcgcacatcgcatcctgatctcc
cactgcacacccaacgagcctgtggaatcaatcagcgcattccagtgtcctacttgtcgt
tatgtcatcaccctcaaccagaggggcctagagggactcaagcgcaacgtcaccctgcag
aacattatcgaccgcttccagaaagcttcagtgagcgggcccaactccccaagtgagacc
cgccgagagcgggccttcgacggcaacgccatgaccacatccagtgagaaagtgcagtgc
cagttctgcgaccaagacccgccacaggatgctgtcaagacctgtgtcacctgtgaggtc
tcctactgtgaggactgcctgaaggccacccaccccaacaagaagcccttcacgggccac
cgcctcatcgagccaatcccagactcacacctgcgcgggcttatgtgcttggagcacgag
gacgagaaagtgaacatgtactgtgtgacggacgaacagttaatctgttctttgtgcaag
cttgtggggcggcacagggatcatcaggtggcagccctgagcgaccggtatgaaaaacta
aagagaccccctgggaagtttttcagtcagaggaatgagcaggaagcctcagaccagcaa
ggtttagacacaaatctgagcaacctaatcaagaggaacaatgaactggaaactctaatg
ggcaaactcattcagacatgccagcatgtagaggtaaatgcatcaagacaagagtccaaa
ctaattgaagaatgtgatcagctgattgacatcattcagcaaaggagacaaattattgga
acaaaaatcaaggaagggaaggtggtgagattgcgtaaactggcccagcagattggtaac
tgcaaacaatgcattgataaatcctcgtccctcatcacccaggctgaacaaaccctcaag
gaaaatgaccatgcccgcttcctgcagacggcaaaaaatatcactgaaagagtttccatg
gcgacagcatcttcccaggtcctgataccacaaatcaacttaaatgacacgtttgacaca
tttgcattagacttttcaagggaaaagaaaatgctagaaagccttgactatctcaccgct
ccaaatcctccgggaattcgtgaagagctgtgtacagcgtcgcatgatactatcactgtc
cactggacatctgatgatgaattcagcattgtctcctatgaacttcagtatgccatcttc
acaggacaggccaatgtagttagtttatgtaactccgctgacagctggatgattgttccc
aatattaaacagaaccactacactgtgcatggactgcagagcggcaccaagtacatcttc
atcgtcaaggcgataaatcaggctggcagccgaagcagtgagcctggcaagctcaagaca
aacagtcagcctttcaagttggacccgaaatctgcccatcggaagttaaaggtgtcccat
gacaatctaactgttgaacgtgatgagacttcttcaaaaaagagtcacacgcaagagcgt
ttcaccagtcaggggagctatggtgtgacaggcaatgtgtacattgacagcgggcgccac
tattgggagtcccttattggaggaagcacatggtatgcagttggaatctcctacaagtca
gctcccaagcatgagtggattggtaagaattcagcctcttgggtcttgtgtcgctgtaac
aactcctgggtggtgagacacaacagcaaggagttacccatcgagccctcccctcacctg
cggcgtgttggagttttgctggactacgacaatggctttctggccttctacgatgctgta
agctctcagcacctttacacgtttgacatttcatttgcacagcccgtgtgccctgtattt
aacgtgtggaacaagtgtttaacagttttaacagggcttcccataccagatcatttggag
tgcactgagctgcagccgtga
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