KEGG   Acipenser ruthenus (sterlet): 117407290
Entry
117407290         CDS       T07327                                 
Name
(RefSeq) cullin-4A-like
  KO
K10609  cullin 4
Organism
arut  Acipenser ruthenus (sterlet)
Pathway
arut03420  Nucleotide excision repair
arut04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:arut00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    117407290
  09124 Replication and repair
   03420 Nucleotide excision repair
    117407290
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:arut04121]
    117407290
   03400 DNA repair and recombination proteins [BR:arut03400]
    117407290
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:arut04147]
    117407290
Ubiquitin system [BR:arut04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     117407290
DNA repair and recombination proteins [BR:arut03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      117407290
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      117407290
Exosome [BR:arut04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   117407290
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 117407290
NCBI-ProteinID: XP_033868016
LinkDB
Position
8:53320611..53342883
AA seq 757 aa
MMSEETGQKNNKANCTALAEHTNGLTKPSALVTKPGASKKLVIKNFKDRPKLSDNYTQDT
WKKLQEAVGAIQNSTSIKYNLEELYQAVENLCSYKVSATLYKQLRQVCEEHVKAQMHQFR
EDSLDNVLFLKKMNKCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDTGLELFRSHI
ISDKMVQSKTVDGILQLIERERNGEAVDRSLLRSLLNMLSDLQVYKDSFEQKFLKETHRL
YAAEGQSLMQEREVPEYLHHVNKRLEEETDRVITYLDQSTQKQLILTVEKQLLGEHLTAI
LQKGLHHLLDGNRITELTLLYQLFSRLKGGLQVLLQHWSEYIKTFGSALVMMPEKDKDMV
QELLDFKDKTDQITEACFQKNEKFVNSMKESFETYINKRPNKPAELIAKYVDSKLRAGNK
EATDEELERILDKIMIIFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHE
CGAAFTSKLEGMFKDMELSKDVMIQFKQFMQNQSDPGNIELTVNILTMGYWPTYIPMEVH
LPPEMVKLQEVFKMFYLGKHSGRKLQWQPTLGHAVLKSEFKEGKKELQVSLFQTLVLLMF
NEGEEFTFDEIKTATGIEDGELRRTLQSLACGKARVLIKNPKGKDVEDGDKFIFHADFRH
KLFRIKINQIQMKETIEEQVNTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSELYNQ
LKFPVKPGDLKKRIESLIDRDYMERDKDNPNQYHYVA
NT seq 2274 nt   +upstreamnt  +downstreamnt
atgatgtcggaagagactgggcagaaaaacaataaagctaactgcactgctttagcagag
cacacgaacgggcttacaaaaccatctgcactagtcaccaaacctggggcatctaagaaa
ttagttataaaaaattttaaagatagaccaaagctgtcagataattacactcaggataca
tggaaaaaactccaggaagcagtcggagccatacagaatagcacctcaattaaatacaac
ctggaagagctgtatcaggcagtggaaaacctttgttcctataaggtatctgctacactg
tacaaacagctccgacaggtctgtgaagagcatgtcaaagcgcagatgcatcagttcaga
gaagattctttggacaatgttttatttcttaaaaagatgaataaatgttggcaggatcac
tgtagacaaatgataatgatcagaagcattttcttatttttggatcgaacatacgtcctg
cagaattcaatgctgccctctatttgggacacaggtctggagttgttcagaagccatata
atcagtgataagatggtccagagtaaaacagttgacggcattcttcagctgattgaaaga
gaacggaacggggaggctgtagacagaagcttattacgcagcttgctaaatatgctttca
gacctgcaggtgtataaggattcctttgaacagaaatttttgaaagagactcatcgttta
tatgcagctgagggtcaaagcctgatgcaagagagagaggtaccagaatatcttcaccat
gtcaacaaacgactggaggaggagacggatagagtaataacatacttggatcagagcaca
cagaaacagctaatactcactgtggagaagcagttactcggagaacacctaacagccatc
cttcaaaaagggcttcatcacctgctggatggaaacaggataactgagctcaccctcctg
taccagctcttcagcaggctcaaaggaggactgcaggtgcttttgcaacactggagcgaa
tacattaagacctttggaagtgcactagtgatgatgcctgagaaagataaagacatggtt
caggagctattagacttcaaggataaaacagaccagatcactgaggcatgcttccagaaa
aatgaaaagtttgtcaattctatgaaggaatcctttgagacgtatataaacaagaggccc
aacaagcctgcagaactaatagcaaagtatgttgattcaaaactacgtgctggaaataaa
gaagcaacagatgaagagctggagagaatactggataagataatgatcatcttcaggttc
atccacggtaaagatgtgtttgaggcattttacaagaaagatcttgccaagaggctgctg
gttgggaagagtgcttcagtagatgctgagaaatcaatgctgtccaaactgaaacatgaa
tgcggagctgcatttaccagcaaactagaggggatgtttaaagacatggagctgtcgaaa
gacgtcatgattcaattcaaacagtttatgcagaatcaaagtgacccaggcaacatagaa
ctcacagttaatatcctcacgatgggatactggcctacgtatatacctatggaggtgcac
cttcctcctgagatggtgaaacttcaagaagtattcaagatgttttaccttggcaagcac
agtggcagaaagctgcagtggcaacccacacttggacatgctgttctcaaatccgagttt
aaggagggtaagaaggagcttcaggtgtccctcttccagacacttgtccttctcatgttc
aacgaaggagaggagttcaccttcgatgagattaaaacagctactggaatagaggacggt
gagctgagaagaactctacaatctcttgcctgtggaaaagctcgagttctcattaaaaac
cccaagggaaaagacgtggaagatggtgataaattcatatttcatgctgacttcaggcac
aagttattcaggataaagataaaccagatacagatgaaagaaacgatcgaggagcaagtg
aacaccacggagagagtgtttcaagacagacagtaccagatagacgctgccattgtccgc
atcatgaagatgaggaagactctgagccacaaccttcttgtgtctgagctctacaatcaa
ctcaaattcccagtcaagcctggagacttgaagaagagaattgaatccctcattgacaga
gactacatggagagagataaggacaaccccaaccagtaccattatgtggcataa

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