Acipenser ruthenus (sterlet): 117407335
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Entry
117407335 CDS
T07327
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-17-like
KO
K16499
protocadherin delta 2
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
arut04515
]
117407335
Cell adhesion molecules [BR:
arut04515
]
Cadherins
Protocadherins
117407335
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
117407335
NCBI-ProteinID:
XP_034778237
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Position
8:58873511..58918717
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AA seq
1126 aa
AA seq
DB search
MYLSIFCFLLLWAQALTLKNLNYSVPEEQGPGTVIGNIAKDARLASGERNRKSNFRVLEN
SAPHLLDVDPESGLLYTKQRIDRETLCRRNPKCQLSLEVFANDKEICMIKVEIQDINDNS
PSFPSEQIDIDISENAAPGTRFPIASAHDADSGENGLKTYQITRDDYNIFSLDVKSRGDG
TKFPELVVQRPLDREEQSHHTLVLTALDGGEHPRSGTVQINVKVIDSNDNSPLFDQPSYI
VEIPENAPSGTVVIDLNATDPDEGTNGQVVYSFSGYAPDRIRELFSIDSKTGVIKVQGEI
DYEESGIIEIDVQAKDLGPNPIPAHCKVTVKVIDKNDNWPSIGFVSVRQGAISESAPTGT
VIALVRVTDKDSGRNGQLQCRVLGNVPFKLEENYDNFYTVITDRPLDREVQDEYNVTIVA
KDNGIPPLNSTKSFTVKILDENDNAPRFTKPVYLLQVPENNIPGEYLGSVLAHDPDLGQN
GTVSYSILPSHVGDVSIYTYVSVNPTNGAIYALRSFNYEQTKFFEFKVLAKDSGSPHLES
NATVRVSVLDVNDNAPVIVLPLLQNDTAEIHVPRNVGVGYILTTVRAVDNDYGESGRLTY
EITDGNEEHLFEMDSVTGEVRTVHPFWEEVTPVAELIIKVTDHGKPKLSAVSKLIIKAFT
GSPPEGEPRINEEQRHWDMSLPLIVTLSIVSIILLAAMITIAVKCKRENKEIRTYNCRIA
EYSHPQLGKSKKKKINKNDIMLVQSEVEERDAMNVMNVVSSPSLATSPMYFDYQTRLPLS
SPRSEVMYLKPTSNNLTVPQGHAGCHTSFTGPVTNTTETPVNRMSIIQTDNFPAEPNYMG
SRQQFVQSSSTFKDPERASLRDSGHGDSDQADSDQDTNKGSCCDMSAKEALKMKSTTVKP
QPPQQEQEECINCTDECRVLGHSDRCWMPQFPTANQAENADYRTNLFVPAGAEVNVETES
YETVNTNGKKTFCTFGKEKRDHTILVANVKPYLKAKRALSPLLQELPSASNSPNKTCIPA
CTSTRGLIEGCEVKSGNFAESSGXYLSANKQLKDSAYPPSDPMAKVLCDVHSRVSRDSSE
MDCVLEQLDQANPELGREALDAEQVVREIDKLLQDCRGSEATSVRK
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgtacctttctattttctgtttcttgctgctctgggctcaagccctgacactgaaaaac
ctgaattattccgtcccagaggaacaagggcccgggactgtgattgggaacattgccaaa
gatgccaggcttgcatctggagagcgaaacaggaaatccaactttcgggttttagaaaat
tcagccccacatctgctggatgtggatcctgaaagcggactgctgtatactaagcagcgg
atcgatagggaaacactgtgcaggcgaaaccccaagtgccagctctctttagaagtgttt
gccaacgataaagagatctgcatgattaaagtggaaattcaggatataaacgataattcg
cccagtttcccttcagaacagatcgatattgacatttctgagaacgcagcaccggggaca
cgcttcccaattgccagcgcacacgacgccgactcgggggaaaacgggttaaaaacatac
cagatcacccgagacgattataatatattttcattggacgtaaaatccagaggagacggg
actaaattccctgaattagttgttcagagacctttagacagggaggaacagagccatcac
acacttgtattaacagcattggatggtggagaacatcccagatcagggactgtgcaaata
aatgttaaagttattgattctaatgacaatagtccattgtttgaccagccctcttatatt
gtagaaatacctgaaaatgccccttccggtactgtagtgatagatttaaatgctacagac
ccagatgaaggcaccaatggacaggtagtttattcttttagtggttatgcaccagatagg
atccgtgagcttttctctattgactctaaaacaggtgttataaaggttcagggtgaaata
gactatgaggaaagtgggattattgagattgatgtccaggctaaggatttaggacccaac
cccattcctgcccactgtaaagtaactgtcaaagtaattgataaaaatgacaattggccc
tccattggttttgtgtctgtccgccagggggccatcagtgagtctgcgcccacaggcact
gttattgccctggtaagggttactgataaggattcagggagaaacggacagctccagtgc
agagtgctgggcaatgtgcctttcaaactggaggaaaactatgataatttttacaccgta
attaccgatagacctttagaccgagaggttcaggatgaatacaatgtgacgatagtggcc
aaagacaatggaatccctcccctcaattcaaccaaatcttttacagttaaaatcttagat
gaaaatgacaatgccccacgttttaccaaaccagtttaccttctgcaggtgcctgagaat
aacatccctggggagtatttggggtcagttttggcacatgatccagatttgggtcagaat
ggcactgtatcttattctattttaccatcgcatgtaggagatgtgtccatctacacatat
gtgtctgtgaaccccacaaacggagccatttacgcgttacgatcctttaactatgagcaa
accaagttttttgagtttaaagtcctagcaaaggattcgggatctcctcatttggaaagc
aatgcaacagtacgggttagtgttttagatgtaaatgataatgccccagttattgtctta
cctctcctacagaatgacactgctgaaattcatgtcccccgaaatgttggagtaggatat
attctaaccacagtaagggcagttgacaatgactatggagaaagtggccggctaacttat
gagattacagatgggaatgaagagcacttatttgagatggactccgtcactggtgaagtg
agaacagtgcatcctttctgggaagaagttaccccagttgcagagctaataataaaggtg
acagaccatggaaaaccaaaactttctgcggtgtcaaaactgataatcaaggctttcact
ggctctccgcctgaaggggagccccgaataaacgaggagcagcgtcactgggacatgtct
ttgcctttgattgtcactttgagcatcgtctccatcatcctccttgcagccatgatcacc
atagctgtaaagtgcaaaagagaaaacaaagagatcagaacttacaactgccggattgcc
gagtattctcatccacagctaggcaagagcaagaagaaaaagattaataagaacgacatc
atgctggtgcaaagcgaggttgaggagagggatgccatgaatgtgatgaatgtggttagc
agcccctccctcgccacttcccccatgtattttgattaccagactagattgcccctgagt
tcccccaggtcagaggttatgtacctgaaacccacctctaacaacctgactgttcctcaa
ggacatgctggctgtcacaccagcttcacaggaccggtgacaaatacaacggaaacacca
gttaataggatgtcaataattcagacagacaattttcccgcagagcccaattacatgggc
agcaggcagcagtttgttcaaagcagctccacattcaaggaccctgaacgtgcaagcctt
agagacagcggtcatggggacagtgaccaggctgacagtgaccaggacaccaataaaggc
tcctgctgtgacatgtcagccaaggaggccctcaagatgaaatcaactactgttaaaccc
cagcctccccagcaagagcaagaagagtgcattaattgcacggatgagtgtcgagtacta
ggacactctgacaggtgctggatgccacagttccccacagctaaccaggcagagaacgca
gattatcgcacaaacctctttgtaccagcaggtgctgaagtgaacgtcgagactgagagt
tatgaaaccgtgaacaccaatggaaaaaaaacattctgcactttcggaaaagagaaaaga
gatcacaccattcttgttgccaacgtcaaaccttacttgaaagccaagcgtgctctgagc
cccttattgcaagaacttccctcagcttcaaacagccccaacaagacatgtatcccagca
tgcacatccacaagaggactgatagaaggctgtgaagtgaaatctggcaactttgcagaa
tcaagcggcncatacctgtcagccaataaacagctgaaagactccgcgtaccctccgtca
gatccgatggctaaagtcctttgcgatgtgcattctcgagtgagtcgagactccagtgag
atggactgtgtgctggaacaattagaccaggccaacccagaattaggcagagaggccttg
gatgccgaacaggttgtgcgtgaaatcgacaagcttttacaggattgccgtggaagtgaa
gccacatccgtgagaaagtga
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