Acipenser ruthenus (sterlet): 117407522
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Entry
117407522 CDS
T07327
Name
(RefSeq) protocadherin-8-like
KO
K16499
protocadherin delta 2
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
arut04515
]
117407522
Cell adhesion molecules [BR:
arut04515
]
Cadherins
Protocadherins
117407522
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Fibulin_C
TMEM154
PAG
Motif
Other DBs
NCBI-GeneID:
117407522
NCBI-ProteinID:
XP_033868538
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Position
8:59423187..59427055
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AA seq
1003 aa
AA seq
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MGSKKLRDLFPVSRKWALGCYFFNLLFFLPTISEAKTVKYQTYEEEKPETVIGHLAEDLQ
LSATQGGLTSFRMMKQFNTSFIKLRESDGELTIGERIDRERICRQSLKCLIAFDVVSFSK
EQFKLIHVEVEVKDINDNSPEFPHLETSLDISESAAIGTRIPLEVAVDEDVGSNYIQSYQ
ILVNSHFTIEVLSRADGVKYAELVLLKELDRETQSSHVLELVATDGGSPSRSGTTNINIK
VKDFNDNSPVFDQSSFSVELNEDAPVGFLLLDLNAVDADEGLNGEVVYGFGNQVTSEICQ
LFKVDRHSGRLTLEHPVDFETKKTYELDVQAYDLGPNPTPAICKIIIHIQDVNDNAPEIS
ITPMTSISAGIAYITEAAAKDSFVALISTSDRDSGVNGKVHCTLYGHDHFKLQQAYEDSY
MIVTTTSLDREKISEYNLTVVAEDLGSPPFRTIKQYTIRVSDENDNAPLFSKTVYEVSVV
ENNSLGAYITTVIARDPDLGHNGKVMYRLVDAEIMGSPVSTFVSVDPATGSIYALRNLNY
EVVKQLQFRIQASDGGSPQLHSTAVINVKIVDQNDNAPSIIHPVLINGSAEVLVPRDAPS
GYLITKIKASDADQGVNSELTYRIGTEEQHVAFSINKVTGEIYLNREISHEYREVIKITI
TVSDNGRPSLSSTATLHFIITTTAPHSGHVVVAQSPEDNKLFHMDMSVIVIIVLAGSCTL
LLLAIILIATTCNRRKNEKETTGFQGDVDVQMGNGRNNSDTLISSHSGSAFDSRPYCSKS
SFSNSHTTESDMCSSCEDGRDTACMYEAENRLPVSNTECYSALPGFDEEVVRPIAIWKGN
SFSTISARDPEFSGKDSGKGDSDFNDSDSDVSGDGQKKAVVPGNVHNGLWACTSECKILG
HSDRCWSPSAMRASANNSSHTSQSLSSLAKTASLPRETLQRENYYQAHLPKTVGLQSVYE
KVLHIDYDYVLVSPPRPVRIQEINETAVSVYAPTMTTSHTNNV
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgggttcaaagaagcttcgagacttgttccctgtctcgcgtaaatgggcgctcgggtgc
tatttttttaacctgttgtttttcttaccaactatttccgaagccaagaccgtgaaatat
cagacctatgaagaagagaagcctgaaacagttatcggacacctagctgaagacctgcag
ttaagtgcaacacagggcggcctgaccagttttcgaatgatgaaacaattcaatacatct
ttcattaaactgagagaaagtgatggagagctgacgattggagagcggattgacagagaa
cgcatctgcaggcagtctctcaagtgtctcattgctttcgacgttgtaagcttttccaag
gagcagttcaaactaatccatgttgaggtggaagtaaaagacatcaacgacaactctcct
gagttcccccatctggaaacctcgcttgacatttcggagagtgcagcgataggtacccga
attccattagaggttgctgtcgatgaagacgtaggctcaaactatattcagagctaccag
attttggtaaacagtcatttcactatcgaggtcctgagcagagcagatggagttaaatat
gccgagctggttctattgaaagaacttgaccgggaaacccagtcatcacatgtgctggaa
cttgtagccacagacggagggagcccatcacgatcaggtaccaccaacataaatattaaa
gtaaaggacttcaatgacaatagccctgtctttgatcagagctcattctctgtggagctc
aatgaagacgctccagttgggtttctcttactagacttaaacgcagtggatgcagacgaa
gggttaaatggtgaagttgtttatggattcggcaatcaagtaacatcagaaatctgccag
ctgtttaaagtggaccgccattccggtcgtttaacactcgaacacccagtcgacttcgag
actaagaaaacgtatgaacttgacgtgcaagcttacgacttgggccccaaccccacccct
gcaatctgtaaaatcattatccacatccaagacgtgaacgacaatgctcctgaaattagt
attactcccatgacatcgataagtgcgggcatagcctacatcacagaagctgcggcgaag
gacagctttgtggctctgatcagcacctcggacagggattccggagttaacggcaaggtg
cactgtactctgtatggacacgatcattttaaattgcagcaagcctatgaagacagctac
atgatcgtaaccaccacatcgctggacagagaaaagatatctgaatacaacctaactgta
gttgctgaagatttgggttcacccccatttagaaccatcaagcaatacacgatcagagtg
agtgacgaaaatgacaacgcgcctctttttagtaaaaccgtttatgaggtttctgttgta
gaaaacaattctctcggtgcctatatcaccaccgtcatagcaagggaccctgatctggga
cacaatggcaaagtaatgtacagactcgtagacgctgagattatggggtcccccgtttct
acctttgtatctgttgacccagcaacaggttctatttacgcactaagaaatctgaactat
gaagtcgtgaaacaacttcagtttcgaatccaggcaagtgatgggggctccccgcagctc
cacagcactgccgtcatcaacgtgaaaatcgtagatcagaatgataacgctccttccatc
atacacccagttttaataaatggatcggccgaggtactggtaccgagagatgcaccgtca
ggttacctaataactaagattaaagctagtgatgcagaccaaggtgtcaactccgagctt
acctacagaatcgggacagaagaacagcatgtggcattttctatcaacaaagtaactggt
gaaatctatttaaaccgcgaaataagccatgaatatcgggaagtaataaaaattaccatc
acagtgagtgacaacggcagaccatcgctctcctcgactgcaactcttcacttcattatt
acaacaacagctccccatagtggtcatgttgtggtggcacagagccccgaagacaacaag
ctctttcacatggacatgtcagtgatcgtcattatagttttggctggtagttgtactctg
cttttacttgccatcatcttaattgcaacaacatgcaatagacgcaagaacgaaaaggaa
acaaccggcttccaaggtgatgtggacgtgcagatgggaaatgggagaaacaacagcgac
acgctcatctccagccacagtggaagtgcattcgacagtcgcccttattgtagcaaatca
tcgttctcaaattcacacactactgagagtgacatgtgctccagttgtgaagatgggaga
gacaccgcctgcatgtatgaagcagagaacaggctgcctgtttccaatactgagtgttac
tctgctcttcctgggttcgacgaggaggttgtccggccgattgcgatctggaaaggcaat
tctttcagcaccatctcagctcgggaccccgagttcagcggcaaggacagcgggaaggga
gacagcgacttcaatgatagcgactcggacgtgagcggagacgggcaaaagaaggctgtt
gtgccaggaaacgtgcacaacggtctgtgggcgtgtacaagcgaatgcaagatccttggg
cactcagataggtgctggagcccctccgcaatgagagccagtgcgaacaactcctcacat
acgtcacaaagtctttcttcattggccaagacagcttcgcttccccgggagactctgcaa
agagaaaattactaccaagcacacttacccaaaacagtgggattgcaaagcgtatacgag
aaagtcctacatatagactatgactacgtactggtgtctccaccacgacccgtgagaatc
caagaaatcaacgaaaccgctgtgtctgtatacgcaccaaccatgacaacaagccacact
aataatgtttaa
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