Acipenser ruthenus (sterlet): 117408316
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Entry
117408316 CDS
T07327
Name
(RefSeq) TBC1 domain family member 2A-like
KO
K20165
TBC1 domain family member 2A
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arut04131
]
117408316
Membrane trafficking [BR:
arut04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
117408316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
PH
PH_11
PH_8
Rpn13_ADRM1_Pru
PH_20
Motif
Other DBs
NCBI-GeneID:
117408316
NCBI-ProteinID:
XP_033869102
LinkDB
All DBs
Position
2:complement(62402382..62432899)
Genome browser
AA seq
1007 aa
AA seq
DB search
MKLFYDNEEVVPVSESGKDKAVFNLHSAPHMVRTITMEQDCQVRKPRPAAQSSDPNVTSP
HNHHDLTASAKEEVGRTKENGVDSRHTDQSNTQEKPVMKTEVETSTKLCGYLNKLGGPLK
AWKARWFVFEEKKCQLYYYRMSQDANPLGSIDLANATFGYPAEAEEGTFEIQIPGRVVVL
KALNSQAMLYWLQQLQMKRWQHNTSLVKIPAEPSTTSTQPCQLPSAPEEERTEDFLPAIK
TPKGLVGEAAAYLPDPWQQNALQKLSLKHPITEIQNTVLNICGNKPAQELRRSVFNFDEI
RQPLDSPCEDPVTLGETTVPLAPIAPTVLSAPSVSSVTNGPAQEARTGGKNSPSSSMKKR
EKKMTSSLQPSGENVSGKEGSSVDKRSRLQHEVFTLTEELKSQKELVQLLHKTLEAAQLE
KRTCKQFLAAAGEQERLELVRHKERCIADLDGRLEALLKHKEELEQSLAMRDCQVNELQQ
HVQLMMEKNNAKQEVILKLSEQVDFCMADPKRTISNTMGTDTFCKLQEKIEHLEDDIQAH
KIQNKFLNSEIYQLTKLWRNSSEQEKGLLVKCAYLEAKNCQIESKYLIVLRSLQDSKGLD
SSQQEMVKRLIEDSLQGDVKDVLKLNPVSEYDDYGFKTIPDYEVEDMKLLAKIQALEIRS
NNLRSNEMVDKPLRTRWANYLGNRRLGELAPSLELKGLIRCGIPVEYREQVWRWIVRTRT
QVYRKRNPNRYQELRKHCEVSEHPASRQIRLDLHRTLTGNKHFSSPTSSAVQKLQRILLA
FSWQNPTIGYCQGLNRLAAIALLVLKDEEDAFWCLVAVVEIIMPRDYYSKTLTASQADQR
VFRDFLAEKMPRLTAHFKEHSIDHSLITFNWFLVVFVESLVSDILLRVWDAFLYEGTKVI
FRYALALFKYKEEDILKIHDNLEIYLYLRFFTKTISDGRKLMNIAFNDMNPFPMKLLKNR
REFHMERLTAELQELERIQEEFVKEQQVERKDKDLDTAVSEDEEEID
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttttttacgacaatgaagaagtcgttcctgtaagcgaatcaggcaaagataaa
gcagtttttaatctgcattcagccccacacatggtgaggaccataacgatggagcaggac
tgtcaagtcagaaaacccaggcctgcagctcaatcctctgatcccaatgtgacaagccca
cacaatcaccatgacctcactgccagtgcaaaagaggaagtgggaaggaccaaggagaac
ggggtggattccagacacacagaccagagcaatacccaagagaagccagtcatgaaaact
gaagtggaaacctccacaaaactgtgcgggtatctgaacaaactgggggggcccttgaag
gcttggaaagcccgctggtttgttttcgaagagaagaagtgccaactgtactactacaga
atgtcacaggacgccaatcccttgggaagcattgacctggctaacgctacttttggttac
ccggcggaggcggaggaagggacctttgagattcaaataccaggacgggttgttgttctc
aaggcattaaacagccaagccatgctgtattggttgcagcagctgcaaatgaaacggtgg
cagcacaataccagcctggtgaaaatacctgcagagccctccactacctccacacagccc
tgccagctgccttctgcacctgaggaagaaaggaccgaggacttcctcccagcaataaag
acccccaagggcctggtcggagaagcagcagcctatctgccagacccctggcaacaaaat
gcactgcaaaagctctccctcaagcaccccatcacagagatacagaacacagttctcaat
atctgtggaaacaagccagctcaggagctgaggcggagtgtgttcaactttgacgagatt
cggcagcctctggacagtccctgtgaggatcctgtgacactgggggaaacaacagtgcct
ctggcacccatagcacctacagtcctatcagctccttcagtttcttcagttacaaacggg
cctgctcaggaagcaaggactggagggaagaattctccgtcaagtagcatgaagaagagg
gagaagaaaatgaccagttctctacagccttctggggagaatgtgtcaggaaaggagggg
agctctgttgacaaacggtccagacttcagcacgaggtgttcacgcttactgaggagctc
aaatcacaaaaggagctggtgcaactccttcacaagaccctggaggcagcacagctggag
aagaggacctgcaaacagttcctggcagcagcaggggagcaggagcggctggagctggtg
cggcacaaagagaggtgtatcgcggacctggacggccgcctggaggccctgctgaaacac
aaggaggagctggagcagagcctggccatgcgggactgccaagtgaatgagctgcagcag
cacgtgcagctcatgatggagaagaacaacgccaagcaggaggtcatcctcaagctctcc
gagcaggtggacttctgcatggccgaccccaagcgtaccatatccaacaccatgggcaca
gataccttctgcaagctgcaggagaagattgagcatctcgaggacgatatacaggcgcac
aagatccaaaacaagttcctcaactctgaaatctaccagcttactaagctgtggaggaac
agttcagaacaggagaagggcctcctagtgaagtgtgcctacctggaggctaagaactgc
cagattgagagcaagtacctgatcgtgctgcgcagcctgcaggacagcaaagggctggac
agcagtcagcaggagatggtgaaaaggctcattgaggactcgttgcagggagacgttaag
gacgtgctcaaactcaaccccgtcagtgaatatgacgactatggattcaagactattcct
gattacgaagtagaggacatgaagctcctggccaaaatccaggccctggagatccgttcc
aacaacctgcgcagcaacgagatggtggacaagcccttgcggaccaggtgggctaactac
ctgggcaaccgtcgcttgggcgagctggctccctctctggagctgaagggcctgatccgg
tgtgggatccctgtggagtaccgggagcaggtgtggcgctggatcgtgaggacgcggacg
caggtctataggaagcggaatcccaatcgctaccaggagctgaggaagcactgcgaggtg
tcggagcacccggcctcgcggcagatcaggctggacctgcaccgcaccctcaccggcaac
aagcacttctcctcgcccacctccagcgcagtccaaaagctgcagcgcattctgctagcc
ttctcctggcaaaaccccaccatcggctactgccagggcctcaaccggttggcagctatt
gcacttttagtcctgaaggatgaagaggatgccttctggtgcctggtggctgttgttgaa
atcataatgccacgagactactacagcaaaaccctcactgcctctcaggctgatcagaga
gtgttccgtgactttcttgctgagaagatgcctcgcctgacggcccacttcaaagagcac
agcatcgaccactccctcatcaccttcaactggttcctagtggtcttcgtggaaagcctg
gtcagcgacatcctgctcagagtgtgggacgctttcctctatgagggaacaaaggtgata
tttcgctatgcgctagccctctttaagtacaaggaggaggacattctaaagatccacgac
aatctggagatctacctgtacctccgttttttcaccaaaacgatctctgatggcaggaaa
ctaatgaacatagcgtttaatgatatgaaccccttccctatgaagctgctgaagaacaga
cgagagtttcacatggagaggctgacagccgagctgcaggagctggagaggatacaggag
gagtttgtgaaagaacaacaagtggagcgcaaagacaaggacctggacactgctgtcagc
gaagacgaagaagaaatagactga
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