Acipenser ruthenus (sterlet): 117408343
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Entry
117408343 CDS
T07327
Name
(RefSeq) platelet-derived growth factor receptor alpha-like
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04010
MAPK signaling pathway
arut04020
Calcium signaling pathway
arut04144
Endocytosis
arut04510
Focal adhesion
arut04540
Gap junction
arut04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117408343
04020 Calcium signaling pathway
117408343
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117408343
09144 Cellular community - eukaryotes
04510 Focal adhesion
117408343
04540 Gap junction
117408343
09142 Cell motility
04810 Regulation of actin cytoskeleton
117408343
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
arut01001
]
117408343
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
arut04090
]
117408343
Enzymes [BR:
arut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
117408343
Protein kinases [BR:
arut01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
117408343
CD molecules [BR:
arut04090
]
Proteins
117408343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_3
Pkinase
I-set
ig
Ig_2
VEGFR1-3_N_Ig-like
VEGFR-1-like_Ig-like
V-set
V-set_CD47
MBG_2
Motif
Other DBs
NCBI-GeneID:
117408343
NCBI-ProteinID:
XP_033869153
LinkDB
All DBs
Position
2:49298333..49320595
Genome browser
AA seq
1480 aa
AA seq
DB search
MAVFLKTFLILGYLLIEISTGPQSVDCEQLMPVIYPDKDELIVQPHSSINLSCSGESQLS
WDTPVSLKDVTLVEELVNTGHFVTSLHVQNASASHTGFYTCMYAPLDNNNEEMDGSSVYI
FVPDPAVAFLVHEDPLSKHVLPSPFGMEIPCRVSDPRTHVTLTNIDTGVEVNSQYDNKRG
FIGIFPPGTYICKTTVNGVKTQSEEYIVHGEKVPSELSELHVELEVHQAVLKEGEHISLT
CVVSGDHMFQQDWQYPGKQAGRGAQDVKNMQDGEVRYTLNIPQASVEDTGDYECSVTQMQ
DETIVRTKNITVYEKGFITLIPTFGQMEYANLYDDKELTVNIEAYPAPKVTWLRDNVAVT
GGYAVTTHISGIRYQSTLRLIHAKEEAIGNYTIKAENENKQTSFTFSLRVKGPRLPLRQQ
ALPVISPHKEELIVQPLSSFKLSCSGESEVTWNTPVEESQVILEEEEDNSGLFVTSLNVL
NASASNTGYYSCYYSAVNNTEDANLDESSIYIYVPDPAVPFIPPLNQFSQHVPATYEDME
IPCRVTDPHSNVTLTNVDTGLTVSSLYDSKRGFIGVFPEGTYVCIINGVEVMSEEYIVHG
WRETSELHVELEAPKTVVMEGEPIIITCIARGSEMLEDHWKYPGKLANRGLKTVKENKKD
VEIWYTLSIPQASVKDSGLYECSITHVMSDEIQVKKVTITVYEKGFITLDPKFAEMEYAD
LHEVKEFKMNIKAYPDPKVTWFKGSVVLNEDNTEMTSTKTEVSETRYQSTLMLIRAKEED
SGNYTILVQNGNESVSYTFSLQVKVPAAIVDLMDVHHGSNSGQSVVCIADGLPTPEVEWF
ICKNIKQCANDSSQWTPLPVNSTDITIETHLDEENKIESEVIFAKLEDTLAVKCLAKNEL
AAVAREVKLVSHALRSELTVAAAVLVLLVIVIISLIVLVIIWKQKPRYEIRWRVIESISP
DGHEYIYVDPMQLPYDSRWEFPRDGLVLGRILGSGAFGKVVEGTVYGLSRSQPVMKVAVK
MLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLH
KNRENFLNRHPEKVKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLE
MKDGSKYSDSQRSNYDHPPSHKQKSLTDTEVNNLLSDDSSEGLTVMDLLSFTYQVARGME
FLASKNCVHRDLAARNVLLSQGKIVKICDFGLARDIMHDNNYVSKGSTFLPVKWMAPESI
FDNMYTTLSDVWSYGILLWEIFSLGGTPYPGMVVDSSFYNKIKSGYRMTRPEHANNEVYE
MMMRCWSSEPEKRPSFCSLSDTVASLLPVEYKKSYEKVNRDFLKSDHPAVTRMKAETEDA
YIGVTYKNEDKLKDRESGFDEQRLSSDSGYIIPLPDLDPVSDDEYSKRNRHSSQTSEESA
IETGSSSSTFIKREDETIEDIEMMDDMGLDSSDLAEDSFL
NT seq
4443 nt
NT seq
+upstream
nt +downstream
nt
atggctgtcttcttgaagacattcctgattctgggatatctcttgattgagatctctaca
ggtccccagtcagttgactgtgaacagctgatgcctgtcatttaccctgataaagatgaa
ctcattgtacagccccactcttccatcaatctgagttgctctggagaaagccagctgagc
tgggacacccctgtgtcactgaaagatgtcactctggtagaagaacttgtgaacactgga
cacttcgtcacatctctgcatgtacagaacgcctctgcttcccatactggattctacacc
tgcatgtatgcaccattagataataacaatgaggagatggatgggagctcagtttacatt
tttgttccagatccagcggtggctttccttgtccatgaagatccactcagtaaacatgtt
cttccaagtccctttggtatggaaattccgtgccgtgtatctgaccctcggacacacgtg
accctcaccaacatagatacaggcgtcgaggtgaacagccagtatgacaacaaaagaggc
ttcatcgggatcttccctcccggaacctacatttgtaaaaccactgtcaatggagtgaaa
actcaaagtgaagaatatatagtccacggcgaaaaagtcccttcagagctttccgaactc
catgttgaactagaggtgcatcaggcagtgctgaaggaaggggagcatatctctttaact
tgcgtagtcagtggggaccacatgttccaacaggactggcagtaccctgggaaacaggct
ggcagaggagcgcaggatgtgaagaatatgcaagatggtgaggtgcggtacacactgaat
attcctcaagcctctgtggaagacactggggattacgaatgttctgtaacacaaatgcag
gacgagacaatagtgaggacgaagaacattactgtttatgagaaaggatttataactttg
attcccacgtttggccaaatggaatatgcaaacttatatgatgataaggaactcacagtg
aacattgaagcttacccagcaccaaaagtgacttggttaagggacaatgttgcagtcact
ggaggctatgcagtgacaacccatataagtggaatcaggtatcaaagtactctgagactg
attcatgcaaaagaggaggccatcggaaactatactattaaggctgagaatgaaaataag
caaactagtttcacattttctttaagggtgaaagggcctcgtttacctctgcgccagcaa
gcattgccagtaatttccccccataaagaggaactcattgtgcagcctctatcctcgttc
aaactgagttgctctggggagagcgaggtaacctggaatacccctgtcgaagagagtcag
gtcattcttgaggaggaagaagacaacagtggactctttgtgacttctcttaacgtactg
aatgcctcggcttccaatacaggatactactcctgttattactcagcagtgaacaacaca
gaggatgctaatctggacgagagctccatttacatttatgttccagatccagcggttcct
tttattccgcctctaaaccaatttagtcaacatgttcctgcaacctacgaggacatggaa
atcccttgtcgtgtaactgacccgcattcaaatgttaccctgaccaatgtagacacaggc
ttgacagtatccagcctgtacgacagcaaaagaggcttcattggggtctttcctgaaggg
acctatgtatgtatcattaatggcgtggaagtcatgagtgaagaatatatagtgcacggc
tggagagaaacctctgaacttcacgttgagttggaggctccaaaaacagttgttatggaa
ggggaacctatcatcattacctgtatagccagagggagtgagatgcttgaggaccactgg
aagtacccggggaaactggctaacagaggactgaagactgtgaaggaaaacaagaaggat
gttgaaatctggtacactctgagtatcccacaggcctctgtgaaggacagtgggctgtac
gagtgctccataacccatgtgatgagtgatgagatacaagtgaagaaggtcaccatcaca
gtttatgagaaaggatttatcactttggacccaaagtttgccgaaatggaatatgcagac
ctacatgaagtaaaggaatttaaaatgaacatcaaagcttaccctgatcctaaagtgacc
tggtttaaaggcagtgttgtactgaatgaagacaacacagaaatgaccagcaccaagaca
gaagtcagtgaaacaagatatcagagtaccctgatgctcattcgtgcaaaagaagaggac
agtggcaactacaccattttagttcagaatggaaacgagagtgttagttatactttttcc
ttgcaagtgaaagttccagcagccatagtggatctgatggatgttcaccacggttccaac
agtggacagtcggtagtgtgcatagctgatgggttacctacacctgaagttgaatggttc
atttgcaagaacatcaaacaatgtgcaaatgattcatcacagtggactccactgcccgta
aattcaactgatatcactattgaaacccatctagatgaagagaacaagattgaaagcgaa
gtaatatttgccaagctagaggatactttggcagtgaagtgtctagctaagaatgagctt
gctgcagtggcccgagaagtgaaactagtgtcgcatgctttacgctctgagttaacagtg
gctgctgcagtgcttgtcttgttggtcattgtcatcatctcactgatagtgctcgtcatt
atctggaaacagaaacccagatatgagattagatggagggtgattgagtccatcagcccc
gacggccatgaatatatctatgtggatcccatgcagctgccctatgactctagatgggag
tttcctcgtgatggacttgtgcttggccgaatccttgggtccggtgcttttggcaaagtg
gtagaaggaaccgtatatgggttaagccgttcacagccagtgatgaaagttgctgtaaaa
atgctgaagcccacagcaagatccagtgagaagcaagccctcatgtctgaactaaagata
atgactcacctggggccccatctaaacattgtcaacttgctgggagcatgcaccaaatca
ggtcctatttacataattactgaatactgcttttatggagacctggttaactatctgcat
aagaaccgtgaaaacttcttaaatcgacacccagagaaagtgaagaaggatctcgatatc
tttggcatcaacccagcagatgaaagcactaggagctatgtgatcttgtcttttgaaaac
aaaggagactacatggacatgaagcaagctgatacaacgcagtacgtgccaatgctggag
atgaaggatggttcaaagtattcagactcccaaagatcaaattatgatcacccaccttca
cataagcagaaatcactaactgatactgaagtaaacaatttgctatcagatgacagcagt
gaaggtctcactgtaatggacctgctcagcttcacataccaggtggcgagaggcatggag
ttcttggcttccaaaaattgtgttcatcgtgatttggctgcaagaaatgtcctgctgtct
caaggaaagattgtgaaaatctgtgattttggattagctagagacatcatgcatgacaat
aactacgtttctaaaggcagtactttcctcccagtgaagtggatggcaccggaaagcatt
ttcgataatatgtacacaacgctgagcgatgtgtggtcttacggcatcttgctgtgggaa
atcttttcactaggtggaaccccgtatcctggaatggtggtggactccagcttttacaac
aaaatcaaaagtggctacagaatgacaagacctgaacatgcaaacaacgaagtgtatgag
atgatgatgaggtgctggagcagcgaaccagaaaagagaccctccttctgcagcctgagc
gacactgtggcgtccttgttacctgtggaatacaagaagagctatgaaaaggtgaaccgt
gacttcctgaagagcgaccaccctgctgttacccgaatgaaggcggaaactgaagacgct
tacatcggtgtcacgtacaaaaatgaggacaagctgaaggacagggagagtgggttcgat
gagcagagacttagctccgacagtggctacatcatccctttgccagacctggaccctgtc
tcagacgatgagtacagcaagaggaaccggcacagctcccagacatctgaagaaagtgcc
atcgagacaggttccagcagttccacattcatcaagcgcgaggatgaaacgattgaggac
attgagatgatggatgatatggggttggattcatctgacctggctgaggacagtttcttg
taa
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