Acipenser ruthenus (sterlet): 117408432
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Entry
117408432 CDS
T07327
Name
(RefSeq) CCR4-NOT transcription complex subunit 7 isoform X1
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117408432
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arut03019
]
117408432
Messenger RNA biogenesis [BR:
arut03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117408432
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
117408432
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
117408432
NCBI-ProteinID:
XP_033869305
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Position
2:complement(52169403..52180046)
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AA seq
286 aa
AA seq
DB search
MPAATVDHNQRICEVWACNLEEELKRIRQVIHKYNYVAMDTEFPGVVARPIGEFRSNADY
QYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTSTWQLNFKFNLTEDMYAQDSIELLTTSG
IQFKKHEEEGIETLYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELD
FFEILRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFK
MREMFFEDHIDDAKYCGHLYGLGSGSPYVQNGTGNAYEEEANKPQS
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgccagcagctactgtagatcataaccaaagaatttgcgaggtctgggcttgcaaccta
gaggaagagctgaagagaatccgccaagttattcataaatataactatgttgcaatggac
acagagtttccaggtgtagtagcaagaccaatcggagaattcagaagcaatgctgactac
cagtaccagttgctgcgatgtaatgtagacttgttaaagataatccaactaggcctgact
ttcatgaacgaacagggcgaataccctcctggcacttcaacatggcagttaaattttaaa
tttaacctcacggaggacatgtacgctcaggactccatagagctgctaacaacatctggt
atccagtttaaaaaacatgaggaagaggggattgaaacactctacttcgcagaactgctt
atgacctctggtgtggtcctgtgtgaaggggtcaaatggctgtctttccatagtggctat
gactttggatacctaatcaaaatcctaacaaattccaacttgccagaagaagaattggat
ttttttgagatcctccgtttgttctttcctgtcatatatgacgtgaagtacctcatgaaa
agctgcaaaaacctcaagggtggcttgcaagaagtagctgaacagctggaattggagaga
ataggaccacagcaccaggctggctcagactctctactgacaggcatggccttctttaaa
atgagagagatgttctttgaggatcacattgacgatgcgaaatactgtggtcacttgtat
ggccttggttctggttcaccctatgttcaaaatggcacaggcaatgcatatgaggaagaa
gccaacaaaccacaatcatga
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