Acipenser ruthenus (sterlet): 117408622
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Entry
117408622 CDS
T07327
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut02010
ABC transporters
arut04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117408622
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
117408622
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
arut02000
]
117408622
Transporters [BR:
arut02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
117408622
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DrrA1-3_C
AAA_23
Motif
Other DBs
NCBI-GeneID:
117408622
NCBI-ProteinID:
XP_033869676
LinkDB
All DBs
Position
2:complement(77141637..77201402)
Genome browser
AA seq
2263 aa
AA seq
DB search
MSAFTQLGLLLWKNFVYRRRQTLQLLIEIAWPLFLFFILISVRMSYPPYEQHECHFPNKA
LPSAGTLPWVQGIICNANNPCFRYPTPGEAPGVVGNFNESIISRLFSDAKKILLYSQNDK
SLGGFRSLIKALKNMQNTSSGFKLKDFLIENETLSTFLRENASFPEFAVKEILDANVNLE
KVLTRGFGVRLKDLCNVTKLEDFVTISDSRVSSVSEHIICTSSKEWLNRAERLFLSNLDF
VKPIRKKVKSDPHSIQLVSEATENLLQSLGTLVVELSTMKSWNDMRNEILFLSENATGSP
RQMYQAVSRIVCGHPEGGGLKIKSMNWYEDNNYKALFGGNSTEDETSFYDNSSTPYCNNM
MNNLESSPISRMIWRALKPLLIGKILYTPDTPATQRIIHEVNKTFQELGVFRDLGGLWDE
IKPKVWKFMERSQEMDLVRTLLQNNASSSFLDAQLNGTGWSVKAISSFLSRRSEDSQKTR
GSVYTWRDVFNETDHAILTISRFMECVNLDKLEPAPTEERLINTSMKLLDERRFWAGIVF
PGIESNSSDLPPHVDYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYIWGGFTYLQD
VIEQGIIRAVTGTEKKTGVYIQQMPYPCYVDDMFLQVMSRSLPLFMILAWIYSVAIIIKG
IVYEKEARLKETMRIMGLDNGMLWLSWFISSLIPFLISASLLVFILKKGNLLPYSDPSVV
FMFLATFAVVTIMQCFLISTIFSRANMAAACGGIIYFTLYLPYVLCVAWQDYVGVTVKVI
ASLLSPVAFGFGCEYFALFEEQGVGIQWNNLLSSPIEEDNYNLTTSIYIMFFDAFLYGVM
TWYIETVFPGQYGIPRPWYFPFTKSYWFGDTQQKIPERPSTRKENSEVCIEEEPAHLELG
VFVEDLVKIYQDGKKVAVDGLTLGFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAY
ILGKDIRSDLSAIRKNLGVCPQHNVLFDQLTVEEHIWFYARLKGLSEAEVKVEMEQIVVD
VGLPDKRKAKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWDLLLKYR
HGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLYLKNQLGTGYYLTLVKKDVEPSL
SSCRNSSSTVSFIKKDDSVSQNSSDAGLGSDHESDTTIIDVTLISNLILKHVPKARMVED
FGHELTYILPYESAKDGAFVELFHEIDDRLSDLGISSYGVSDTTLEEIFLKVAEDSGVDA
EITDGTIPARRNRRHAFGDRQSCLRPFTEDDVFDLNDSDVDPESRETDLLSGMDGKGSFK
VKGWSLIRQQFVALLWKRFLHARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLE
LQPWMYGEQYTFISNDVPEDAHIQKLFGALTSKPGFGTRCMSGDPIPDTPCMKDDGDWTM
PEVPQSVMDIFINGNWTMENPSPPCECSKDDKKKMLPECPAGAGGLPPPQITHGTTDILQ
NLTGRNISDYLVKTYAQIIGKSLKNKIWVNEFRYGGFSLGARSSQVLPPGEELNDAIIQV
RKIFSLEQGKAGDRFMSSLSGFMKGLDTKDNVKIWFNNKGWHGIGAFLNVMNNGLLRASL
PEGKDPSLYGISAFNHPLNLTKEQLSQVALITTSVDVLVSICVIFAMSFVPASFVVYLIQ
ERVSKSKHMQFISGVRPGLYWLANFVWDMCNYIVPATLVIIIFVCFQQKSYVSAANLPVL
ALLLLLYGWSITPLMYPASFLFKIPSTAYVVLTSVNLFIGINGSVATFVLDLFGNDSHNS
INDILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFRSPFSWDMVGRNLFAMAV
QGAVFFCITVLIQYRFFIKPRRISAKLPPIHDEDEDVAKERQRILSGGGQSDILELKELT
KVYRMKRKPAVDRLCVGIPPGECFGLLGVNGAGKTTTFQMLTGDTDVTGGEAFLNGKSVL
SEIRDAHQNMGYCPQFDAINELLTGREHLELYAILRGVPEEEVCKVAEWGVRKLGLVKYM
DKGAGNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRALWNCILGIIKEGRSVV
LTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIILRIAGPNPNLKPVMEF
IECELPGSVLKEKHRNMLQYQLPSSLSSLARLFSILSKNKSQLRIEDYSVSQTTLDQVFV
NFAKDQSDEDHSKDNSVHRKETVINISLLNSFLKNDKVKESCV
NT seq
6792 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccttcactcaactggggctgctgctatggaaaaactttgtgtacagaagaagg
caaacacttcagctgctgattgagatagcatggccactgtttctgttcttcatattgatc
tcagtgaggatgtcataccccccatatgaacaacatgagtgtcactttcctaacaaggcc
ttgccctcagcggggactctgccatgggttcagggtatcatctgcaatgctaacaatcca
tgctttcggtacccaacaccgggtgaagcgccaggagttgtaggaaacttcaatgaatca
atcatctcacgcctgttttctgatgcaaagaagatcctactgtacagtcagaatgacaaa
agccttggtggattcagaagtcttattaaagccctgaagaacatgcagaacacaagctca
ggatttaaactgaaagattttctcattgaaaatgagaccttgtcaacatttcttcgggaa
aatgcttcattcccggagtttgcagtgaaagaaatattggatgccaatgtaaacctggaa
aaggtgcttacaagaggctttggtgtgcgtctgaaggacctttgcaatgtaacaaaattg
gaagactttgtcaccatatctgatagcagagtgtcttcagtctctgaacacattatctgc
acatcatctaaagaatggctgaatcgcgcagaaagactttttctttcaaacctagatttt
gtaaaacccatacggaaaaaagtgaagtcagaccctcattccatccagctggtatcggaa
gccacagaaaacctcttgcagagtctgggaaccctggtagttgagctgtccaccatgaag
agctggaatgacatgaggaatgagatcctattcctgagcgagaatgccactggatctcca
agacagatgtaccaggctgtgtccaggattgtctgtggtcacccagaaggaggtggactc
aagatcaagtcaatgaactggtacgaggacaacaactacaaagcactgtttgggggaaac
agcacagaagatgagacttctttttatgacaactcatccactccctactgcaataatatg
atgaacaatttggaatccagcccaatctctagaatgatctggagagcactgaagcctctg
ctcattggtaaaattctctacactccagatactccagccacacaaagaatcattcacgag
gttaacaagacatttcaggaactgggtgtgtttcgagatcttggcggcttgtgggacgag
attaaaccaaaggtctggaaattcatggaacgcagccaggagatggatctcgttcggact
cttctccagaacaatgcaagttcaagtttcttggatgcacagttaaatggcactggctgg
tctgtgaaagcgatttccagtttcttatcaaggcgctctgaagattctcagaaaactaga
ggttcagtgtacacgtggagggatgttttcaacgagactgaccatgctattctaactata
tcacgcttcatggagtgtgtgaatttggataaactggagcctgctcccactgaggagaga
ttaataaacacatccatgaagctgcttgatgaaagaagattttgggctggaattgtattt
cctggaatagaatcgaacagtagtgacttgcctccgcatgtggattacaagatccgaatg
gacattgacaatgtggagagaaccaacaagattaaagatgggtactgggaccctggtccg
agggcagatccctttgaagacatgcgctatatctggggcggatttacttaccttcaggat
gtgatcgaacagggcatcatccgagctgttacaggcacagagaagaaaactggagtttat
atacagcagatgccttacccctgttatgtggatgacatgtttttgcaagtgatgagtcgc
tctctgccccttttcatgatattggcttggatctactcagtggctatcattatcaaaggc
atagtctatgagaaggaagctcgtctgaaggagacaatgaggattatgggattggacaat
ggcatgctgtggctgagctggttcattagcagcttgattcctttccttatcagtgcttca
cttttggtcttcatactcaagaaaggaaacctgttgccctatagtgacccgagtgtagtt
tttatgtttctcgctacctttgctgtcgtgaccataatgcaatgcttcttgataagcaca
attttctcgagggcaaacatggctgcggcttgtggaggcatcatctacttcactctctac
cttccctacgtgctgtgtgtagcctggcaggattacgtgggcgttactgtaaaagtcata
gctagtttgttatcaccagtggcgtttgggtttggctgtgagtattttgcgctctttgaa
gagcagggggttgggattcagtggaacaatctcctctccagtcctatagaggaagacaac
tacaacctcactacctccatatacatcatgtttttcgatgcttttctttatggagtgatg
acctggtacattgaaactgtcttcccaggccagtatgggattcccagaccatggtatttt
ccatttacaaagtcctattggtttggtgatacacagcagaaaatacccgaaaggccatca
actagaaaagaaaactctgaagtttgcattgaggaagagccagcacatcttgaacttgga
gtatttgttgaggacttggttaaaatctatcaagatgggaaaaaggttgctgttgatggt
cttacactcggtttctacgaagggcagatcacttcgtttctagggcacaatggagctgga
aaaaccaccactatgtcgatattaactggcttgtttccacctacatccggtactgcctac
attctgggaaaagatatccgctctgacctcagcgcaatcagaaaaaatctcggagtgtgt
cctcagcacaatgttctttttgaccagctgactgttgaggaacacatttggttctacgcc
cggctcaaaggactgtctgaagcggaggtcaaagtagagatggaacagattgtagtggac
gtaggcctgcccgacaaacggaaagcaaaaacaagccagctctctggtggtatgcaacgg
aaactatcagtcgccctggcatttgttggagggtcaaaggtcgttattctagatgaacct
acagctggagtagacccttactcccgcagaggaatctgggatctgctgctaaaatatcgc
catggccgcacgatcatcctttcaacacaccacatggacgaagcagatattcttggcgac
agaatcgccattatttctcatgggaagctgtgctgtgttgggtcatcactctatctgaag
aatcaactgggaacaggctattacttgaccctggtcaaaaaagatgtggagccatccctg
agttcatgcagaaacagcagcagcacagtatcattcattaaaaaggacgacagtgtttcc
caaaacagttctgatgctggacttggtagtgaccatgaaagtgacacaaccatcatagat
gtgactcttatctcaaacctcattctgaagcatgttccgaaggctcgaatggttgaagat
tttggacacgagctgacttacattttaccgtatgaatctgctaaggatggtgcctttgtt
gagctgttccacgagattgatgacagactgtcagacctgggcatttccagctatggagtc
tcagacaccacgctggaggagattttccttaaagttgctgaagacagtggagttgatgca
gaaattacagatggcaccatccctgcacggaggaacaggagacatgcctttggggacaga
caaagctgcctgagacctttcactgaggatgatgtctttgatttaaatgattccgatgtt
gatccagagtcgagagagacagacctgctaagcggaatggatgggaaaggctcattcaag
gtgaaaggctggagtcttatcaggcagcagtttgttgctttactctggaaacgatttttg
cacgcaagacgctcccggaagggtttctttgcccagattgtgttaccagctgtgtttgtg
tgcattgctctggtgttcagcctgattgtccctccttttggaaaatacccaagcctggaa
ctgcagccatggatgtatggtgagcagtacactttcataagcaatgatgtccctgaggat
gctcacatacagaaattatttggagctctgaccagcaagcctggctttggtactcgctgt
atgagtggagaccctattcctgataccccatgcatgaaggacgatggtgattggaccatg
cctgaagtaccacagagtgtcatggacatttttataaatggaaactggacaatggaaaac
ccatctccaccttgtgaatgtagcaaggatgacaaaaagaaaatgctccctgaatgccct
gctggggctggtgggcttcctccccctcagatcactcatggtaccacagacattcttcag
aaccttacaggcagaaatatatctgactatcttgtgaaaacatacgcacagatcatcggg
aaaagtctgaagaacaagatttgggtcaatgaatttaggtacggtggattctcattgggt
gctagaagttcacaagtccttcctcctggcgaggaactcaatgatgccataattcaagtc
agaaagatcttcagtttagaacaggggaaagctggagatcggtttatgagtagcttatca
gggttcatgaaagggctggataccaaagataatgtcaagatttggtttaataacaaagga
tggcatggaattggggccttcctgaatgtgatgaacaacggtcttcttcgtgccagttta
ccagagggaaaagatcccagtttgtatggaatcagcgcctttaatcaccctctgaacctc
accaaagaacagctttctcaagttgcactgatcacaacctcagtggatgttttggtctct
atctgtgtgatttttgccatgtcatttgtaccggccagttttgtagtgtacctcattcaa
gagagagttagcaagtccaagcacatgcagttcatcagtggggtcagacccggcctctac
tggcttgcaaacttcgtctgggatatgtgcaactatatagtgccagctactctcgtcatc
atcatttttgtctgttttcaacaaaagtcgtacgtttctgctgccaaccttcctgttctg
gcactgctgctgctgctgtatgggtggtccattactcctttgatgtaccctgcatcgttc
ctgtttaaaatccccagtactgcttatgtagtactcaccagtgttaacctgtttattgga
atcaatggcagtgttgcaaccttcgttcttgacctttttggcaatgacagtcacaactcg
attaatgatattctgaagtccgtattcctaatctttcctcacttttgtctgggacgaggt
cttatcgacatggtgaaaaatcaggcaatggccgatgctttggaaagattcggtgaaaac
cgcttcaggtcgccattctcctgggatatggttggaagaaacctctttgcaatggcagtg
cagggggctgtcttcttctgcattacagtactaatccaatacagattctttattaaaccc
agacggatatctgcaaaacttccaccaatacatgacgaagatgaagacgtggccaaagag
aggcagcgaatactgagtggtggggggcagagtgacattctggaactcaaagagctgacc
aaggtgtacaggatgaaacggaagccagcagtcgacaggctctgtgttggaattccccca
ggagagtgcttcggattgcttggtgtgaatggcgctggaaaaacaaccaccttccaaatg
ctgactggagacacagacgtcacaggcggggaagcttttcttaacggaaagagcgtcctg
tcagagattcgtgatgcccaccagaacatgggttactgccctcagtttgatgccattaat
gagctgctgactggaagagaacacctggaattgtatgccattttacgtggagttcccgaa
gaagaagtttgtaaggttgctgaatggggagttcgtaaactgggacttgtgaaatacatg
gacaaaggagctgggaattacagtggagggaacaaacgcaagctgtccactgcaatggct
ctgattggaggtccacctgtagtattcctggatgagccaaccacagggatggaccccaag
gcacgcagagccctatggaactgtattcttggcattatcaaagaaggaagatctgtggtg
cttacctcacacagtatggaggaatgtgaagcactttgcacgcgaatggctatcatggta
aacggcaggttcagatgccttggcagtgtgcagcaccttaaaaacaggtttggcgacggc
tacacaataattcttcgaatagcaggcccaaatcctaacttgaagcctgtcatggagttc
attgaatgtgaactccctggcagtgtgctgaaggagaaacatcgaaacatgcttcagtat
caactgccgtcctctctctcctccctggcgaggctattcagcatcctttccaaaaacaag
agccaactcagaatagaagactattcagtatcacaaactacactcgaccaagtatttgta
aattttgccaaggaccaaagtgacgaagatcactcaaaggacaattcagttcacagaaaa
gaaactgtgataaatatttcacttcttaattcctttttgaaaaatgacaaggtgaaagaa
agctgtgtgtga
DBGET
integrated database retrieval system
