Acipenser ruthenus (sterlet): 117408640
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Entry
117408640 CDS
T07327
Symbol
polr2b
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03020
RNA polymerase
arut03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
117408640 (polr2b)
09124 Replication and repair
03420 Nucleotide excision repair
117408640 (polr2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arut03021
]
117408640 (polr2b)
03400 DNA repair and recombination proteins [BR:
arut03400
]
117408640 (polr2b)
Enzymes [BR:
arut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
117408640 (polr2b)
Transcription machinery [BR:
arut03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
117408640 (polr2b)
DNA repair and recombination proteins [BR:
arut03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
117408640 (polr2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
117408640
NCBI-ProteinID:
XP_033869712
LinkDB
All DBs
Position
2:complement(76990212..77015543)
Genome browser
AA seq
1174 aa
AA seq
DB search
MYDQDEDIQYDEDEDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHTTGEIEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTIIREGEDQLLTQHQKTFIGKIPIMLRSTYCLLSGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSSIWVSMM
ARGGQGVKKSAIGQRIVSTLPYIRQEVPIIIVFRALGFVSDRDILEHIIYDFDDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEVLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEIRMYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDVKKAHQARAGVSQVLNRLTFASTLS
HLRRLNSPIGRDGKLAKPRQLHNTLWGMICPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKRRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEIFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGEDVIIGKTVTLPENDDELESTNRRYTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTVGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSEYGY
HLRGNEVLYNGFTGRKLTSQIFIGPTYYQRLKHMVDDKIHSRARGPVQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGLMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMSS
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaccaagacgaagatattcagtatgatgaagatgaggatgaaatcactccagat
ttgtggcaggaagcctgttggattgttattagctcgtactttgatgaaaagggcttggta
cgacagcagttggattcatttgatgaatttattcagatgtctgtgcagagaatagtcgag
gatgcccctccaattgacttgcaagctgaagctcaacacaccactggggagattgaagaa
ccgcctcgttacttgctgaagtttgaacagatttacctgtctaaaccaacacattgggag
agagatggtgctccttctcctatgatgccaaatgaagccaggctccgtaatcttacgtac
tctgcgcctctttatgtggacatcacaaaaaccataattagggagggagaggaccaactg
ctgacacagcaccagaaaaccttcattggaaagattccaatcatgcttcgctccacgtac
tgcttgttgagtggcctgacggatcgtgatctttgtgagttgaatgagtgtcccctggat
cctggtggctattttattatcaatggatcagaaaaggttctgattgcccaggagaagatg
gccacgaatacagtttatgtgtttgcaaagaaagattctaaatatgcttacacaggcgaa
tgtcgatcctgtttggagaactcttctcgcccaacaagttccatatgggtcagcatgatg
gcgagaggtggacagggagtaaagaaaagtgcaattggtcagagaatcgtatccacgttg
ccatatattaggcaagaagtccccatcatcattgtgtttcgtgctctggggtttgtgtct
gacagagacatcttggagcatattatttatgattttgatgatccagaaatgatggaaatg
gtcaaaccgtcactggatgaagcttttgttattcaggaacagaacgtggctctgaatttc
atcggttcgagaggtgcgaaacctggagtaacgaaagagaagagaattaagtatgccaag
gaggtcttgcagaaagaagtgctgccacacgtgggtgtcagtgacttctgtgaaacaaag
aaggcctatttcttggggtacatggttcataggctgttgctggctgctttaggtaggcga
gagctggatgacagagatcactatggaaacaaaagactggatctagctggacccttactt
gcttttctatttagaggaatgtttaagaacctgttgaaagaaatcagaatgtatgcacag
aaattcatagacagagggaaagatttcaatttggagttggctatcaaaacccgaataatc
tcagacggattgaagtattctctggctacgggaaattggggcgacgtgaagaaggcccat
caagcaagagctggagtgtctcaggtgttgaatcgtctgacttttgcttcaactttgtct
cacctgaggcgtctgaactctccaattggtagagatgggaaactggctaaacccaggcag
ctgcataatacactgtggggaatgatttgtcctgctgagactccagagggtcatgctgta
gggcttgtaaagaacctggctctcatggcctacatctctgtgggctctcagccttcccca
atcttggagttcttggaggagtggagtatggaaaacctggaggagatttctcctgctgct
attgctgatgctaccaagatctttgtcaatggctgctgggtgggaatacacaaggatcct
gaacagctaatgaatacactgagaaaactgcgtcgccaaatggacatcatagtgtctgag
gtctctatgatccgagatatcagagagcgtgagattcgtatttacacggatgctggaaga
atctgtagacctcttctgattgtggagaaacagaagctgctgctgaagaggcgacatatc
gaccagctgaaagagagagagtacaataattacagttggcaggatctcgtggcgagtggt
gttgttgagtatatagataccctggaagaggagactgtgatgcttgcaatgactccagat
gacttgcaggagaaaggagttgcctattgctcaacttacacccactgtgagattcatccg
tccatgatcctaggagtctgtgcttccattatccctttcccagatcataaccagtcccca
agaaacacataccagtctgctatgggtaagcaagccatgggtgtttatattacaaacttc
catgtgcgtatggacaccctggcgcatgtgctgtattacccgcagaaacccttggtgacg
acacgttctatggagtacctacgattcagagaacttccagcaggcatcaactcgatagtg
gcaattgcgtcatacacaggatacaatcaagaagattctgttattatgaatcgctctgct
gttgacagaggcttcttcaggtctgtattctaccgttcttacaaagaacaggaatctaag
aaaggctttgaccaagaagaaatttttgaaaaaccaacacgcgaaacctgtcaaggtatg
aggcatgccatctatgacaagctggatgatgatgggttgatagcacctggagttcgtgtc
tctggggaggacgtcattatcggtaaaactgtgactctgcccgagaacgacgatgagctg
gaaagcacaaacaggagatacacgaagcgagactgtagcactttcctccgcaccagtgaa
actggtattgtggatcaagtaatggtgacgctcaatcaggaaggttacaagttctgcaaa
attagggtgcgttcagtaagaattccacagattggagacaagtttgccagtaggcatggg
caaaagggtacttgtggtatccagtatagacaagaggacatgccctttacctgtgaaggt
ataacacctgatatcatcatcaaccctcacgccatcccctctcgaatgacagttggccat
ttgattgaatgtcttcagggcaaggtgtcagcaaacaagggggagattggcgacgccaca
cctttcaatgatgctgtgaatgtgcaaaagatttccaatctgttatctgaatatggttat
catctgagaggaaatgaggtgttatacaatggttttacaggtcgcaaactgacttcccag
attttcattggccccacatactaccagcggttaaagcacatggtggatgacaagattcac
tcgcgtgctcgtggacctgttcagatcctgaacaggcagcctatggagggtagatcgcgg
gatggagggctgcgtttcggtgaaatggaacgagattgtcagattgctcacggagctgcg
cagttcttgagggaaaggctgtttgaagcttctgatccataccaagtccatgtgtgtaat
ctctgtggactgatggcaattgcaaatacaaggacacacacatacgagtgtcgtgggtgt
agaaataaaacacagatttcgttggttcgaatgccatatgcctgcaaacttctcttccaa
gagttgatgtccatgagtattgctccccgtatgatgtctagttaa
DBGET
integrated database retrieval system
