Acipenser ruthenus (sterlet): 117408842
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Entry
117408842 CDS
T07327
Name
(RefSeq) LOW QUALITY PROTEIN: leucine-rich repeat-containing protein 7-like
KO
K24055
leucine-rich repeat-containing protein 7
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
arut04990
]
117408842
Domain-containing proteins not elsewhere classified [BR:
arut04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
117408842
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_14
LRR_8
LRR_4
PDZ
LRR_LRWD1
PDZ_6
LRR_EndoS
LRR_At5g56370
LRR_5
PDZ_2
LRR_NXF1-5
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
117408842
NCBI-ProteinID:
XP_033870094
LinkDB
All DBs
Position
10:14896226..15022161
Genome browser
AA seq
1548 aa
AA seq
DB search
MDNYSTLPLQCLEMTTKRKLIGRLVPCRCFRGEEEVISVLDYSHCSLQQVPKEIFSFERT
LEELYLDANQIEELPKQLFNCQALRKLSMPDNDLSSLPATIASLVNLKELDISKNGIQDF
PDNIKCCKCLTIIEASVNPIAKLPDGFTQLLNLMQLYLNDAFLEYLPANFGRLTKLRILE
LRENHLKTLPKSIHRLTQLERLDLGNNEFTDMPEVLEQIQNLKELWMDNNGLQTLPGSIG
KLKQLTYLDMSKNRVETIDSEISGCEALEDLLLSSNMLQQLPDSIGMLKKLTTLKVDDNQ
LTALPNTIGSLSLLEEFDCSCNELESLPPTIGYLHNLRTLAADENFLSELPREIGSCKNV
TVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLRNLPFSFTKLKELAALWLSDNQSKALI
PLQSEAHPETKLRVLTNYMFPQQPRNEEDYQSDNDSFNPTLWEEQRQQRMTVAFDFEDKK
EEEENSGKVKVEINLKRYPTPYPEDLKNMVKSVQNLVGKTSHALTGDKRDSSTNMELQVK
DKYEHKWPISTKEVTDREANDFQKTQMTESSTTHNSAMEIPKRKEKDELTESSEIALHRV
VPKQQQPETLSLTASCFCLIDSLGGSPNDIRISDMRPTLVEPPLYKPKVVLMGKEKKEST
DESDTDKMHCPNNSGSSATYSDYSPSQGSSGSSNPPGNVGALQTGSKDGVVPTHWTNRLA
QSFPQPIETKPLLSQRESAPVGIPQQRNERHPLTDTFDNWNDGSHYDNTGFVAEETGMEN
SGAAPMLGSNSRSASTHGRRPLMRQDRIVGVPLELEQTPHTFHNVRNTPETEVPAPNPWQ
NWTRTPSPFEDRTAFPSKLESTPASSPAPDRKDFEQEMGELPGTFPSTGAWGFLESRESG
ASRSHSNIFHCRQDPVKGAIVISKSTERLSPMMKEVKAKFKKSQSIDEIDIGSYKVYSIP
LDNYGSSTENQGSLDKPETQPSQEQSMSRSQSVPMLDEDLEGYASGKGSQQQKPPIPKKV
YHFDQSFNPKGAVDVKSERRLPTSFNTNPEYMSQQGKNIPKEVLSPRGYRGYTPMEHMFS
FSQPSVNEDSISQQFPSQRSRPGFLRRADSLVSSTEMALFRRVTEAQELPLNDRYNRTHY
KGMLEHQNSLSSMAESQFHKRNGRYEDEYSSYQETKKPITGFPVKNLTQRRPLSARSYST
ESYGASQARPVSARPTMAALLEKVPSDYNLSTCTEKTSDNEMKMRTAQMKGDESSSKMPV
DWRQQLLRHIEAKRLDRNAALKHNTVNLGNLYAGRFSAVHANTNMTLNFDNNPKHEYQKN
QHTPSQQSNVLDNGQEDASPTSQWAPYSLGRRDIPPENVIKKLPDSLPNGLNYPQAGSHS
HQVQTMMVSSTQNPQHRSARDQQYEGAINKISIQQYQSPLPIPISSTQSLSSPRGAQSGR
CLIQTKGQKSMDGYQDQFCVRIEKNPGLGFSITGGISGQGNPFKPSDMGIFVTRVQPDGS
ACNVLQPGDKILKANGHSFSHLEHEKAVSLLKSFPKTVDLVILRENPS
NT seq
4647 nt
NT seq
+upstream
nt +downstream
nt
atggacaattactcaacccttccgttgcagtgtctggagatgacaaccaagaggaagctc
attggccgcctggtgccttgccgatgcttccggggtgaggaagaggtcatctcagtgctg
gactactcccactgcagcctccaacaggtgccaaaggagatcttcagtttcgagcgcacg
ctagaggaactttatctagatgctaatcagattgaagagctacccaagcaattatttaac
tgtcaagcactgcgcaaactgagcatgcccgacaatgatctttccagtctgccagccacc
atcgccagccttgtaaaccttaaggagctagacatcagcaaaaacggtattcaagatttt
ccggataacattaaatgctgtaaatgtttaacaattattgaagccagtgtcaatccaatt
gccaaactcccagatggcttcacacagctgctaaacttaatgcagctctacttaaatgat
gcatttctggaatatcttcctgccaacttcgggaggcttaccaaattacgcatcttggaa
ctacgggaaaatcacctgaaaactttaccaaagtcaatacacagactgacacagctggag
cgtttagacctgggcaataacgaattcactgacatgccggaagtcctggagcaaatacaa
aacctgaaggagctgtggatggataacaatggattgcagacactaccagggtctataggg
aagttaaagcagttgacgtatttggacatgtccaagaacagggtagaaaccattgacagt
gagatttctggttgcgaggctctagaggacctcctcctgtcatctaatatgttgcagcag
ctgccagactcaataggaatgttaaaaaagctgacgactctaaaagtggatgacaaccag
ctgaccgctctgcccaacacaatcggaagtttatcgcttttagaagagtttgattgtagc
tgtaatgagcttgagtcccttcctcccaccattggatacctccataatctccggacgtta
gctgctgatgaaaacttcctgtcagagttgcccagagagatcggaagctgtaaaaatgtg
actgtcatgtctctgcgctccaataagcttgagtttctacctgaggagattggacagatg
cagaagctgagggttttaaatttgagcgacaacaggttaagaaacttgccgttcagtttt
acaaagctgaaggaacttgcagcactttggctttcagataatcagtccaaggcacttatc
cccctacaaagcgaggctcatccagaaacaaagctgagggtgcttaccaactacatgttt
ccacagcagccacgcaacgaagaagattaccagtcagacaatgacagtttcaacccaacc
ctatgggaggagcagcgacagcagcgcatgactgtggcctttgactttgaagacaagaag
gaagaagaggagaactctgggaaagttaaggttgaaataaacctgaaacgctatcccaca
ccctatcctgaggacctgaagaacatggtgaagtcagtgcagaatctggtgggaaagact
agccacgccctaactggagataagcgtgattccagcaccaacatggagctccaagtcaag
gacaaatacgaacacaagtggcccatctcaacaaaggaggttacagatagagaagccaat
gacttccagaagacacagatgaccgaatcaagtaccacccataattctgccatggaaatc
ccaaagcgaaaagagaaggatgagctaaccgagagctctgagattgctttacatcgagtc
gtccccaagcagcaacagccagagactctctcccttacagcttcctgtttctgcctcata
gattccttaggaggctcaccaaatgacattcgaatttcggatatgcgacctaccttagtt
gaacctcctttgtacaagccaaaagtcgtcttgatgggtaaagaaaagaaagaatcgaca
gacgaatcagacacagataaaatgcactgtccaaataacagcggctcctctgccacttac
tcagactactccccttcccaggggtcctcaggctcctcgaaccccccggggaatgtgggc
gctctgcagactggttccaaggacggggtggtgcccacccattggacaaacaggctagct
cagtctttcccccagcccatcgagacaaagccattgctcagccagagagagtctgcccca
gtgggaatcccgcagcagcgcaatgagaggcatccacttactgataccttcgacaactgg
aatgatggctcccattacgacaacactggctttgtcgcagaggaaaccggcatggaaaat
tcgggtgccgccccgatgctaggctccaattccagaagcgcttccacccatggacgcagg
cctctaatgaggcaggataggatagtgggtgtccctctagagctggagcagacaccacac
acgttccacaatgtccgaaacacaccagaaactgaagtgcctgcccctaacccttggcag
aactggacaaggacccccagcccctttgaagacagaactgcgtttccttccaagctggaa
agtactccagcgagcagtccagcccctgacaggaaggactttgagcaagagatgggtgag
ctacctgggaccttcccgtctaccggggcatggggcttcttggaatctcgagagtcggga
gctagccggagccattccaacatattccactgcaggcaagaccctgttaaaggtgctatt
gtaatcagtaaaagcacagagaggttgtctcccatgatgaaggaagtgaaggccaagttc
aaaaaatcccagagcattgacgagattgatattggatcatataaggtttacagcatcccg
cttgataactacggctccagtacagaaaaccaaggcagcttggacaagcccgaaacccag
ccatcgcaggagcaaagcatgtcgcgcagtcagtcggtccccatgctggatgaagatttg
gaagggtacgccagtggcaaggggtcccagcagcagaagcctcctatacctaaaaaagtt
taccacttcgaccaaagcttcaaccctaaaggggcagtggatgtgaagtctgagaggagg
ctacctacctccttcaacaccaaccctgagtatatgagccaacagggtaagaacatcccc
aaggaggtgttgagtccaaggggatacagggggtatacacccatggagcacatgttctca
ttttcccagccttcagtcaatgaggactccatcagccagcagtttcccagccagaggtcc
cggcctggattcctccggagggcagactccctggtcagctccacggagatggctctcttc
agaagggtaacagaagcccaagagctaccgctcaacgaccgatataacaggacgcactat
aaaggcatgttggagcaccagaacagcttgtcctccatggcagaatcccagttccacaaa
aggaacggtaggtatgaggatgaatactcatcgtatcaggagacaaaaaagcccatcaca
ggtttccccgtgaaaaacctaacccagcgacggcctttgtcagcccggagctacagcacg
gagagctacggggcttcccaagcgaggccagtgtctgcaaggcctaccatggctgcactc
ctagaaaaagtcccttctgattacaatctcagcacctgtacagaaaagacctccgacaat
gagatgaagatgcgtactgcacagatgaaaggggatgagagctcttcaaaaatgccagtg
gactggaggcaacagctgcttagacatatagaggctaaaagattagaccggaatgctgcc
cttaagcacaacactgttaaccttggcaacctgtatgctggacgtttttctgcagtgcat
gcaaacacaaacatgactttaaactttgacaataacccaaagcatgaataccaaaagaat
caacatactccgtctcagcagagcaacgtcttggataacggacaggaagacgcgtctcca
accagccagtgggctccgtattcactgggccggagggacataccaccggaaaacgttatc
aaaaaactccctgactctttgcccaacgggttaaattacccacaggcaggtagccactct
caccaagttcagacgatgatggtgtcctccacgcagaacccccagcaccgatccgcccga
gaccaacagtacgaaggtgccatcaataaaatctccatccagcagtatcagtcgccgctg
cccatccccatctcctccacgcaaagcctttccagcccacggggggctcaaagcggacgt
tgcctgatacagacgaaggggcagaagagtatggatgggtatcaggaccagttttgtgta
cgaatcgagaaaaaccctggccttggtttcagcatcacaggaggaattagcggacaggga
aatccatttaagccttcagatatgggtatctttgttactagggtacagcctgacggatcg
gcctgcaacgtcttacaacctggggataagattctaaaggcgaatggacatagtttttca
cacctggaacatgaaaaggctgtatctttgctgaagagtttcccgaaaacagtggacctg
gtaatcttgagggagaatccatcttaa
DBGET
integrated database retrieval system
