Acipenser ruthenus (sterlet): 117409142
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Entry
117409142 CDS
T07327
Name
(RefSeq) general transcription factor IIE subunit 1-like
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117409142
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arut03021
]
117409142
Transcription machinery [BR:
arut03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
117409142
Prokaryotic type
Archaeal type
TFE
117409142
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
Zn_Ribbon_TF
Cas12f1-like_TNB
Zn_ribbon_Elf1
DUF8617
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-GeneID:
117409142
NCBI-ProteinID:
XP_033870667
LinkDB
All DBs
Position
2:complement(52525971..52529890)
Genome browser
AA seq
425 aa
AA seq
DB search
MGDQKVITEVPAALKRLAKYVVRGFYEVEHSLALDLLIRYPCVKEDDLLALLKFEKKQLR
AILTSLKLDKIIKSRMRVETGEDGKATRHNYYYINYKLLVDVIKYKLDQVRKKIETDERD
STTRASFKCPVCGSLYSDLEVNHLFDPASGEFHCTYCSAEVEEDASALPKRDARTLLARF
NEQIEPIYLLLRETEDVVLPCELLEPEPTEIPELMPSFDQMSSGNMKDRSERWSRSTSSI
NMYVQDLVVNLQDSNSNTVKSANTSAKECPIWMTQSTVLGASVQPSESNRADNVAETCDL
NANTKEPIDDEVIRTLLIHEKKSSAQESTTHSSAHQKESSGSDTSESDEDSKATKSQLVK
PPGTPSKQKDAEEDEGDNDPVVMIGGRPHMYSEVSEHPELVSFMTGEEREAYIQIGKLMF
HAMYD
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaccaaaaagtaattactgaagtgcctgcagcgctgaagcggttggccaaatat
gtcgtccgaggattctatgaggtagaacattcacttgcgctagatctgctaataagatat
ccctgtgtgaaagaggatgacctactcgcgctgcttaagtttgaaaagaagcagcttcgg
gccattcttacctcgttaaaattagataaaataattaaaagtcgaatgagagtcgaaacg
ggggaggatgggaaggctacaagacacaactactattatataaattataaactcctggta
gatgtcataaaatataaactagaccaggttcgcaaaaagattgaaactgatgaacgagat
tcaacaactagagcctcgtttaaatgtccagtatgcggcagcctctactcggatctagaa
gttaatcatctgtttgatccagcctcaggggagtttcattgcacttactgcagcgctgaa
gttgaggaggacgcctctgcacttcctaaacgagatgccaggaccctgcttgccaggttc
aatgaacagattgagcccatctatctccttctgcgtgaaactgaagatgtagttcttcca
tgtgagctacttgaaccagagcccacagaaataccagagttaatgccgagctttgatcag
atgtcttccggaaatatgaaagaccggtctgagagatggtcaaggagtacatcgtccatc
aacatgtatgtgcaggatttggttgtgaatctccaagactccaattccaatacagttaaa
tcagcgaatacatctgccaaagagtgtccaatctggatgacacaaagcacagtgctagga
gcctctgttcagccatcagaaagcaacagggctgataatgtggctgaaacctgtgacctg
aatgccaacaccaaggagcctattgatgatgaagtaatcaggactcttctaattcatgag
aaaaaatcctctgcacaagagagtacaacacacagctctgcccatcagaaggaatcctct
ggcagtgacaccagtgaatcggatgaagattctaaggccaccaagtcgcagcttgtgaag
ccaccaggcactccctcaaagcaaaaggatgcagaggaggatgagggtgataatgatcct
gtagtaatgatcggtggacggccacacatgtatagtgaggtcagcgagcatcctgagctg
gtttcctttatgactggagaagagcgagaggcatacattcagattggcaaactcatgttt
catgccatgtatgactaa
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