Acipenser ruthenus (sterlet): 117409224
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Entry
117409224 CDS
T07327
Symbol
focad
Name
(RefSeq) focadhesin
KO
K27498
focadhesin
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arut03019
]
117409224 (focad)
Messenger RNA biogenesis [BR:
arut03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
117409224 (focad)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Focadhesin
DUF3730
DUF4746
Motif
Other DBs
NCBI-GeneID:
117409224
NCBI-ProteinID:
XP_033870804
LinkDB
All DBs
Position
2:complement(69684799..69779293)
Genome browser
AA seq
1805 aa
AA seq
DB search
MSEDLKKRLEFPNSLIQAQAVRSLTTAVLKEKGLSEKITQSSDQTPALELLWEKCCSDNV
VVRAACCDTLVVLVAQDHADHQYVLNNILNLIPSARNVQGLINVIGKLLHMQAVDSSETG
KEKYSCPFTIRNPPHPYISVLENRPDCWPALLQQIAAVIQQCREKSEVACVSMLAPFLRY
LYCETSHLPEHAKLRQSLLKALLPSCETMEEREEPSAADQQVLQLLFDLVPHLQVNNVMQ
VVESAMFLKELSWSFLAHAGFWRKELCLLSLQLLCACELSLRITGECSALIELLERNIDA
LSEDFPSSQVIVGLSLLLLQAPASQQTPILNLALKIIAPSETQQLPVAAPILVMPLLQII
SSAAVMEVLSDSQISTSNQQLALTLLHTVQEQDEGRKEDPLQLSFPISGWYSNIFITWNT
LDRLSQDRTAAYDWLHSVQSTLPYNERVPEHVTLLVAYFIARKHRECFEIALKTAAELAR
VDASQVPSLVPVLMFKLGKLSDPVLSHAVLYTLPALGTHKFCVSQILRALQMLGSTPKLR
AVVLRLMTSLWEMQDRVYPELQRFIGMLDKPSMSIGKEDQWEQILAKAASIRDICKQRPY
QHGGDMLAAISQVLNQCTKPDQATPSALVLQGLHELCRAEVVDIRSTWNALSPKLSCDSR
PLVVKALTELFSLIPVLAVKTEEYEKFKVQVVGILWSYAQSKNPVVASSGYKALSEFSAE
EHIILHLPEQARPEVKKPESDEEMNEEEEEEKEEDLSVPGTSYIKLLTLTPPAVFSALQD
FLASLMKQEMVAMPRGVYHSALKGGALRTGQGKAVAGIPGFMLKTYEKNRQPGLKPGLAA
GLLLCYDLPIQTDRDGRPINRFLVSRGRSYQQMLTALIHEVNIQPSEWHRSVLLPQGWRG
FMGRAYHALLQGRQAELEMQQRHGKESPEDIQYKQFTAWLWVRDQLTDAVKSAAKDSPVM
QGNSILALTGLAVAVAKYENSLPSDVESTQEIGAEVLATKHWLVMVLDTLLSIVDSCYHP
KGRVFPWFQHKSYSGENTASAIARSCAALALSLMVPLLITSHKESIKEILNKLTAGLPGK
PHADESQAVQFHTGLALGMFLSCLYEERVSDVSDQKMNLLLMKSLDALEGCCFDTSLEYN
TGCILGVGLVLSLMSHSSQTESRVHVAVTLDKLLDSLDESSNQGRMLQEVLAYSVACVSV
SAFSVGIIEANKAEEVMKKLRAMTEQSQQTPGFALALGITVHGLSACGHGKAEDFYARVL
PAWIKILLTEGCPTMQRLAAVNGLVALVGSESSLIQLKSDAVQASQHQSRLNEVIRTITQ
VISFSGAIGLQSNASCLIGHVHLANLSSSQSRTSVPPDLGYLSEKSVIKAAVDYIIEAGK
KGPESIPPELVKVALEPVASVGGSFQYPPVNWAAILSPLMRLNFGEDIQQHCIELAVSQA
QSSQSASMFLGMWLAPPLVYSLSLKTRGYLYKSLSLWMKHVPDDKLQSYVEALAVQHFTA
ENRLQYPGLCLSVLEGLGQATKLPNPAQYCWGIICNTTEKIFQLLPDEIQDSEVSLYVEI
AKCLSEMADTEIDRITQVTKDNLVKTSLIRAYLVSQGRVPLLCLNDVIAAALGDSQKESV
CWMLLQSFYQARLAANPNTGVLNRMEWLLELMGHIRNVAYRSTPVEHEDIKQATDFLLQI
FSAAVVSWADHTSPLLLGVSAKWLLRKQETACTNTPKAIFGKHSADALSVQHCLTVLPYS
IQLLLAKEPWKGQTQKFIDWFIGIMEGPKDGLSETSIKTVKAALLALRFLPEFKKKAVWT
RAYGW
NT seq
5418 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagatttaaagaaaagattggaattccctaattctcttattcaggcccaggct
gtgaggagtctaaccactgcagtgctgaaagaaaaaggtttgagtgagaagatcacacag
tcctctgatcagacccctgcattggagctgctatgggagaagtgctgcagtgacaatgtg
gtggtgcgggctgcatgctgtgacactctggtggtgcttgtggcccaggaccatgcagac
catcagtatgtgctcaacaacatcctgaatctcattccatctgccaggaatgtccagggt
ttaattaatgtgattgggaagttactgcacatgcaggctgtagactcctcagaaactgga
aaagagaaatactcctgcccgtttacaataaggaaccctccacatccatatatttctgta
ctggaaaacaggcctgactgctggccagcccttctgcagcagattgcagctgttattcag
cagtgcagggaaaagtcagaggtagcctgtgtttctatgctggcaccctttctcaggtac
ctgtactgtgagacctcacacttaccggagcatgctaaactgaggcagagtctcctcaaa
gccctgctgccatcatgtgagactatggaggaaagagaggagccttctgcagccgaccag
caagtactccaactgctgtttgatctagtcccacatttgcaggtaaacaatgtgatgcag
gtcgtggagtctgccatgttccttaaagaactctcctggagttttctggcacacgctggg
ttttggaggaaggagctgtgccttctgtcgcttcagctgctgtgtgcctgcgagctgagc
ctgaggatcacaggggagtgctctgctttgattgaactccttgagcgaaatatagacgcc
ctttcagaggacttcccatcatcacaggtcatagttggactgagtttactcttgctgcag
gctccagcgagccaacaaactcctattcttaaccttgctttaaagatcattgccccttca
gagacacagcagttacctgtggctgctcctattctggtgatgccgttactgcagatcata
tcgagtgcagctgtcatggaggttttatcagacagtcagattagcacctccaatcagcag
ctggcactcactctcctgcatactgtccaagaacaagatgaaggaagaaaggaggaccct
cttcagctttcattcccaataagtggctggtacagcaacatattcattacttggaacaca
ctggatagactgagccaagaccgaaccgcagcttatgactggctacattctgtccagtca
acactgccttataacgaaagagtccctgaacatgttactcttctcgttgcctacttcatt
gctagaaaacacagagaatgctttgaaattgctttgaaaactgctgctgaattggccagg
gtggatgcatcccaggttcccagccttgttcctgttcttatgttcaagctgggaaagctt
tcagacccagtcttatctcatgccgtattgtacacactacctgctttgggaacacacaag
ttttgcgtttcccagatactgcgcgccttacagatgctggggagcacacccaaactgaga
gcggtggtgctgcgtctcatgacctcgctgtgggagatgcaggaccgcgtgtatccagag
ctgcagaggttcattggtatgttggacaagccgtccatgtcaataggaaaggaggaccag
tgggagcagattttagccaaagctgcctcaattcgggatatctgtaagcaaaggccttac
caacatggcggcgacatgctggctgcaatctcccaggtactaaatcagtgcactaaacct
gaccaggccaccccttcagctctcgttcttcaagggctgcatgagctctgtcgagcagag
gttgttgacattcgctcaacgtggaatgccttatctcccaagctgagctgtgattctcgc
ccacttgtagttaaagcgctgacagaactgttttccctgattcctgtgttagctgttaag
actgaggagtatgagaaatttaaagtccaggttgtcggcatcctctggagctatgctcag
agcaagaatcctgtggtagcaagcagtggctacaaagctctttctgaattcagtgctgaa
gaacatataatacttcatcttccagagcaggccagaccagaggtcaagaaacctgaatct
gacgaagaaatgaatgaggaggaggaggaggagaaggaagaagatctttctgtaccaggc
acgtcctacatcaaactcctcacactaacacctcctgctgtgttcagtgcacttcaggac
tttttggcatctctcatgaagcaggagatggttgcaatgcctcgcggagtgtaccactcg
gctctcaaagggggagccttgcgcacgggccaggggaaggctgtagcagggattccaggg
ttcatgctaaaaacttatgaaaagaacaggcagccaggactgaaacctggacttgcagct
ggattgttgctctgttatgatcttcccattcagactgacagggatggaaggcccatcaat
cgatttcttgtcagcaggggacgcagctatcagcagatgctgacagctcttattcatgag
gtgaacatccaaccatccgaatggcaccgctcagtcctcttgccgcagggttggcgtggg
ttcatgggcagggcataccatgctctgttacagggtagacaagcagagcttgagatgcag
caaagacatggcaaagaaagtcctgaggacatccagtacaaacagtttacagcttggctc
tgggtcagagaccaactcaccgatgcagtcaaatcagcagctaaggacagcccagttatg
caagggaactcaatattagctcttactgggcttgctgttgccgtagccaagtatgagaac
agccttccatcagacgttgagagcacacaagagattggtgctgaagtgttggcaactaag
cactggcttgtcatggttctagacacactgctgagtattgtggacagttgctatcatccc
aagggccgtgttttcccctggttccaacacaaatcgtactctggagagaacacagccagt
gccattgctcgctcctgtgctgccctggctttgtccctgatggtgccactgttgatcaca
tcccacaaggagagcatcaaggagatcctaaacaaactcacggcagggttgccagggaaa
ccacatgcagatgagtcccaggctgtgcagttccacacaggtctcgctttgggaatgttt
ctctcctgtttatacgaggaacgtgtcagtgatgtctctgatcagaaaatgaatttgctc
ctgatgaagtcactggatgcgctggagggttgctgttttgacaccagtttggagtacaac
actggatgtatcttgggagttggtcttgtgctttccttgatgagccacagcagtcagact
gagtcccgtgtgcatgtagctgtgaccctggacaagctacttgacagcctggatgagagc
agcaaccagggcaggatgctgcaagaggttttggcctattcagtcgcttgtgtcagcgtg
tctgccttcagcgtcggcatcatcgaggccaacaaagcagaagaagttatgaagaagctt
agagccatgacagaacaaagtcaacagaccccagggtttgcattggctttaggtataact
gttcatgggttatcagcctgtgggcatggtaaagctgaagacttttatgctcgagttctg
cctgcctggataaaaatcttactgactgagggatgtcccacgatgcaacgtctggcggct
gtgaatgggttggttgcgctggtggggtctgaaagttcccttattcagctgaagtctgat
gctgtacaagcctcccagcatcaaagccggcttaatgaggtcataagaacaataacccag
gttataagtttctctggtgcgattggactgcagtcgaatgcctcctgtctcataggacat
gttcaccttgcaaacttgtcatcaagtcaaagcaggacttcagttcctccagatttgggg
tacttgtctgagaagagtgtcatcaaggcagctgtggattacatcatcgaagctggaaag
aaaggtcctgagtccatccccccggagctggtgaaggtggctctggagcctgttgcttca
gtgggtggcagtttccagtatccacctgtcaactgggctgctattctctctcccttgatg
aggcttaacttcggtgaagacatccagcaacactgcattgagctagctgtgagccaagcc
cagtcatcccagagtgcctctatgttcctaggaatgtggctggcaccacctcttgtttac
agtctcagtctaaagacaagaggctacctttacaagtctctttccctttggatgaaacat
gtccctgatgacaaactgcagtcatatgtggaggcgttggcagttcagcacttcacagca
gagaacagactgcagtacccaggcctgtgcttgtcagtactggaagggcttggccaagcc
acaaagctgcccaatccagcacagtactgctggggcataatctgcaacaccacagagaaa
atcttccagctgctaccagatgaaattcaggacagtgaagtcagtctctatgtggaaatt
gctaaatgtctgtcagagatggcagacactgaaattgacagaataactcaagtcaccaag
gataaccttgtgaagacatccctcatcagggcctacctggtctctcagggcagagtccca
ctgctgtgtttgaatgatgtcattgctgctgccttgggcgatagccagaaagagtcagtc
tgctggatgttgttacagagtttttatcaggcacgccttgcagccaacccaaatacagga
gttctaaacagaatggaatggcttttagaattaatgggccatatcagaaatgttgcttat
cgatcaacccctgtagagcatgaggatatcaagcaggcaacagatttccttcttcaaata
ttttctgctgctgttgtgtcatgggctgaccatacctcacctttgcttcttggagtcagt
gccaagtggttgttaaggaaacaagaaactgcatgtaccaacacccccaaagctattttt
ggcaaacactcagctgatgcactttcggtgcagcattgcttaacagttcttccatacagc
attcaacttttgttggctaaggaaccttggaaaggccaaacccaaaagtttatagactgg
ttcattggaataatggaaggtcctaaagatggtctgtcggaaacatctattaaaactgta
aaagctgctcttttagccttaaggtttctccccgagttcaaaaagaaagcagtgtggacc
agggcttacggctggtag
DBGET
integrated database retrieval system
