Acipenser ruthenus (sterlet): 117409296
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Entry
117409296 CDS
T07327
Name
(RefSeq) polycystin-2-like
KO
K04986
polycystin 2
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
arut03037
]
117409296
04040 Ion channels [BR:
arut04040
]
117409296
Cilium and associated proteins [BR:
arut03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
117409296
Ion channels [BR:
arut04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
117409296
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
Fer4_24
EF-hand_1
EF-hand_7
EF-hand_6
Motif
Other DBs
NCBI-GeneID:
117409296
NCBI-ProteinID:
XP_033871009
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All DBs
Position
2:58446776..58469503
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AA seq
917 aa
AA seq
DB search
MSSSRVTPQQRQPLPGHNSSGATGPTGTRRDPNDRGMDIEMIHHPDRGPGSTTGTPPSSS
CSRQAWSRVNPGFEPEEEMLEAGWPPANPGRRSVSTASSSTSSGSIGYIRGGGTRGNRGL
CPTPTVEILHRQDRTEHSGCGKRILQKLRVLWGTRLMEDSGASREKYLKYVLRELITYII
FLVILCFLTYGMVSSSMYYYTKVMSQLFLDTPLSSGEKTNFKTLASMGDFWKFTEGPLVG
GLYWDAWYNNKTLPENQSLIYYENLLLGVPRLRQLKVRNESCVIHEDLRDEIQDCYNMYS
MGNEDTSPFGLLTGTAWTYAKEEDLNGSHHWGLITTYSGGGYYLDLSRTREKTAAKVKTL
KENLWLDRGTRVVFIDFSVYNANINLFCVVRLVVEFPATGGTVTSWQFQTVKLIRYVSNF
DYFVAACEIAFCLFILYYVVEEILEIRIHRLHYFRSLWNCLDILIIVLSLAAVVINIYQT
STVKAVLKYLLENQETFSNFEQLAYLQIQFNNLAAVIVFFSWIKLFKFINFNKTMSQLSS
TMSRCAKDVIGFAIMFFIIFLAYAQLAYLVFGTQVNDFSTFQACIFTQFRIILGDFDFAE
IEEANRILGPIYFTTFVFFIFFILLNMFLAIINDTYSEVKADMAQQKSEMELADLIKKGC
NKAMVKLRLKNTTVDDISESLRQAGGKLNFSELRQDLKGKGHTDAEIEAIFAKYDQDGDQ
ELTEQEHQQMRDDLEKEREDLDLERSSLPRPVSGRSFPRSLDDSEEDDDEDSGHSSRRRG
SSSSGVSYEEFQVLVRRVDRMEHSIGSIVSKIDAVIVKLEAMERAKLKRRDVLGRLLDGV
TEDERLGRDNEIHREQMERLVREELERWESDDTVSQMSHRLGTPQGGNGQPRSHSSRPSS
SQSTEGLEGAGSSGSHV
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgagctcaagtcgtgtaacacctcagcagcggcagcccctgcctggtcacaactcctcg
ggcgcaactggtccgacaggcactagacgagacccaaacgatcgcgggatggatatagaa
atgattcaccacccggaccgtggtcccgggagtaccaccggcacacctccctcttcttcc
tgctccagacaggcctggagcagggtaaatcctggatttgaacccgaggaagaaatgctg
gaggcaggctggcctcctgcgaaccctggaagaaggtcggtgtccacagcgtccagcagt
accagcagcgggagtataggttacatcagaggtggtggtacacgggggaataggggactg
tgcccgacccctactgtggaaatactgcaccgccaagatagaactgagcacagtgggtgt
gggaaaaggatactgcaaaaacttcgagtcctatggggaacgaggttgatggaggatagc
ggtgcaagcagagaaaagtacctgaagtatgtactgcgagagctgattacttacatcatt
ttcctggtgatactgtgttttttgacatatgggatggtgagctccagcatgtattattac
acaaaggtcatgtcacagctgttcctggacactcctctatcaagtggggagaagacaaat
ttcaaaactttggcaagcatgggtgacttctggaagttcacagaaggtccattagtgggt
ggcctgtattgggatgcctggtataacaacaaaaccctgcctgagaaccagagtttaatt
tactatgagaacctgcttctgggtgtacctcgcttaagacagctaaaagttaggaacgag
tcgtgtgtgatccatgaagacttgagagatgaaatccaggattgttacaacatgtattca
atgggaaatgaggacacctctccatttggtcttttaactggaactgcctggacttacgct
aaagaagaggatttgaatggaagccatcactggggtctgatcactacctatagtggcggg
gggtactatctggacctctcacggaccagagaaaagacagctgcaaaagtgaaaacactt
aaagagaacctgtggctggacagaggaacccgcgtggtgttcattgatttctcggtttac
aatgccaatatcaatctcttttgtgttgtcaggttggtggtggagtttcctgccactggt
ggcactgttacctcttggcagtttcagaccgtgaagctgatccgctatgtatccaacttt
gactacttcgtagctgcctgtgagatcgctttctgtctttttatcctctactatgtggtg
gaggagatcctggaaatccgcattcatagactccattacttcaggagcctctggaactgc
ctggacattcttatcattgtgctatctcttgcggctgttgttattaatatataccagaca
tctactgtgaaggctgttctaaagtaccttttggaaaatcaggagactttctcgaacttt
gagcagcttgcctacttgcagatccagtttaacaacctggcagcagtgattgtgttcttc
tcctggattaagctctttaaattcattaactttaacaaaacaatgagtcagttatcttcc
accatgtctcgttgtgccaaggatgtcattggctttgccatcatgttcttcatcatattc
ttggcttatgcccagctggcatatctcgtgtttggaacccaagttaatgacttcagtaca
ttccaggcctgtatcttcacgcagttccgcattattctgggtgattttgattttgctgaa
attgaagaagcaaacagaattttggggccaatttactttacaacatttgtcttcttcatt
ttctttattcttctgaacatgtttttggctataattaatgacacctactcagaagtaaaa
gctgacatggcccaacagaaatcagaaatggaacttgctgatctcattaaaaagggatgt
aacaaggccatggttaaactccggctcaagaacaccacagttgatgacatttcggagagc
cttcgacaggcgggaggaaagctcaacttcagtgaactgcgacaggatcttaaaggaaaa
ggccacacagatgctgagattgaagccatttttgctaaatatgatcaagatggagatcaa
gagctgacggaacaagaacaccaacaaatgagagatgatttggagaaggagcgagaggat
ctggacctggaaaggagctcgttgcctcggccagtcagtggacgcagctttccccgcagt
ctggatgactccgaggaggacgatgatgaggacagcggccacagctcccgcaggagaggc
agcagctccagtggagtctcctatgaggaattccaggtgctggttagacgtgtggatcgt
atggagcattcgatcggaagtattgtgtccaaaatagatgctgtgattgtaaagcttgaa
gcaatggagcgagccaaactgaagagaagggatgtgcttggcagacttctggatggggtc
actgaggacgagcgactggggcgtgacaatgagatccaccgggagcagatggagcgactg
gtacgagaggagctggagcgctgggagtctgacgacactgtgtcccagatgagccaccgt
ctggggaccccgcagggtgggaatggacaacctcgttcgcacagctcccggccatcttcc
tcgcagtccacagagggtctggagggagcaggaagttcgggcagccatgtgtaa
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