Acipenser ruthenus (sterlet): 117409314
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Entry
117409314 CDS
T07327
Name
(RefSeq) RAB6A-GEF complex partner protein 1-like isoform X1
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arut04131
]
117409314
Membrane trafficking [BR:
arut04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
117409314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIC1
ANAPC4_WD40
PEP5_VPS11_N
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
117409314
NCBI-ProteinID:
XP_033871043
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All DBs
Position
2:48014671..48135387
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AA seq
1420 aa
AA seq
DB search
MYFLTGWPRRLLCPLKSEEKPFHIQPDSHRVFFAVLSQTQISVWYSQPSVLIVSYKESAK
AASQFGSYQQAEWRPDSTMIAVATANGYILLFDILAAGEDKFLYEAVYPKGSLRVKVTPS
YKEEQCAPALSVELKKVMDLQAPITSLQSMQEDLVVATADGLLHLIHWDAVTNGRKDINV
CTVPFSVDLQSSRAGPSLDFKDVHIRDMEYCITLDGFAVVFNDGRVGFITPMSSRFSAEQ
LRGVWAQDVLDGTCVAVNNKYRLMAFGCASGSVLVYTIDAATGSMQLSHKLELTAKHYPD
AWNKTGAVKLIRWSPDYSVTMVTWECGGLSLWSVFGAHLICTLGEDFAYRSDGTKKDPIK
ISSMSWGAEGYHLWVISSDISQPLESEPENKSATQQSDILQFQFLKSALTVNPCMSTQEQ
VLLQGEDRLYLTCGDTAQAQSTSTSSANSDHRAFKERNPLPNTISISQGLSTLLGHRHWH
VVQIHSTYLDSNWPIRFAAVDTVGQCVAVAGRFGFAHYSFFTRKWKLFGNITQEHNMTVT
GGLAWWNDFIVIACYNLIDQQEELRLYLRSSNLDNAFANVTKLYSETLLINVFRDMVILF
RADCSICLYSIERKQDSTNPTASIELLQEVSMSRYIPHPALVVSVTLTSVRTETGITLKA
PQQACAAESIMLNLAGQLIMMQRDRSGPQVREKETTANQKKLLPFCAPVVLAQCVENVWT
TCRANKNKRHLLEALWLACGEAGMKVWLPLFPRDNRKPHSFLSRRIMLPFHINIYPLAVL
FEDALVLGATNETVLYDGLPRAGVAGAGEPLEALFPFCTVERTSQIYLHHILRQLLVRNL
GEQALLLAQSCAGLPYFPHVLELMVHVVLEEEATSREPIPDPLLPTVAKFITEFPLFLQT
IVHCARKTEYALWNYLFAAVGNPKDLFEECLMAQDLETAASYLIILQNMEVPAVSRQHAT
LLFNTALEQGKWDLCRHMIRFLKAIGSGETETPPTTPTTQEPSSTGGFEFFRHRSISLSQ
SADSLTAWKFNLQKTLSMPSGPSAKRWSKESECAENMYIDMMLWRHARRLLEEVRLKDLG
CFSAQLGFELIGWLCKERTRAARVDDFVMALKRLHEDFLWPFPVISASSINSPFRNGRYR
TVVGEHLLKSHSADSLINNEMDTGASNAPRSHSWLDSLNSASREMDTAAHTQEAFLSPLL
NKGDECSIGSATDLTETSSMVDGDWTMVDENFSTLSLTQSELEHMSMELANKGPHKSQVQ
LRYLLHIFTEAGCPEWCVIIGIIMREASVISQVVSCLQSAEVPVDTVLNIKNGLLAVDAW
ASTDCLGYKPFLDLIRPQLQKLVEVTPEQVQPEAFQPTSTAKLVEPVCPRPEDSRGGPAS
HNTSSQSEDGSGASRLEEDSPVEEQEEQPLEEGSYDCTLS
NT seq
4263 nt
NT seq
+upstream
nt +downstream
nt
atgtattttttaactggctggcccaggagactactgtgtcctttgaaaagtgaagagaaa
ccgtttcacatccagccggattcccacagagttttcttcgcagtgttgtcacaaactcag
atcagcgtctggtacagccagcccagtgttcttatagtgagttacaaagagtcggcaaag
gcggcctcccagtttgggtcctaccagcaggcagaatggaggccagacagcaccatgata
gctgtggcaactgcaaatggatacatcttactctttgacatcctagctgctggagaggac
aaatttctctacgaagctgtgtatcccaaagggagtcttcgtgtgaaagtgacacccagc
tacaaagaggaacaatgtgctcctgcgttaagtgtggaactgaagaaggtgatggacttg
caagcacccatcacaagcttgcagtcaatgcaggaagacctggtggttgccactgccgac
ggccttcttcatctcattcactgggacgcagtgaccaatgggaggaaggatatcaatgtc
tgtacagttcccttttctgtagacctgcagtcctcaagagcaggcccttcgctggatttc
aaagatgtgcacattagagacatggagtactgtataaccctggatggctttgctgtggtc
tttaatgatggacgcgtgggctttattactccaatgtcaagcagattttctgcagagcaa
ctgcgaggtgtgtgggcacaggatgtactagacggcacctgtgtagctgtaaacaacaag
taccgattaatggcgtttggatgtgcaagcggctctgttttagtttacacaatagacgca
gcaacaggatcaatgcagctttcccacaagttagaattaacagcaaaacactatcctgac
gcttggaataaaacaggagctgtgaagttgatccggtggtcacctgactacagtgtgacc
atggtgacttgggaatgtggaggcctgtccttgtggagtgtgtttggtgctcacctcatc
tgtacgctcggagaggactttgcctatcggtctgatggcacaaagaaagaccctattaag
ataagctctatgagctggggtgcggaaggttaccacctgtgggttatcagcagcgatatt
tcccagcctctggaaagcgagccagagaacaaatctgccacgcagcagtctgacatcctg
caattccagttcctcaagagcgccttaacagtgaatccttgcatgagtacccaagagcag
gttctgctgcagggggaggatcgcttgtacctgacgtgcggggacacagcccaggcccag
agtaccagtacatcctccgccaactctgaccatcgggctttcaaggaaaggaaccccctc
cccaacaccatttcaatatctcagggtttaagcactttattaggacacagacattggcat
gttgtgcagattcacagcacatatttggacagcaattggccaataaggtttgcagctgta
gacacagtgggacagtgtgttgcggtagctggcagatttgggtttgcacactactccttc
tttacaaggaaatggaaactgtttggaaatatcacccaggagcacaatatgacggtgact
ggtggtttagcgtggtggaatgacttcattgtaattgcctgttataatttgattgaccaa
caagaagagctaagactctacctgaggtcctccaatctcgacaacgcctttgccaatgtc
accaaattgtattcagagacgttgctaataaacgttttccgggacatggtgatattattt
agagcagactgctccatttgcctttacagtattgagaggaagcaggacagtacaaaccca
actgccagtattgagcttctccaagaggtgtccatgtctcgatacatcccccaccctgcc
cttgtggtgtcagtgacactgacttccgtgagaacagagactggcatcaccctgaaagca
ccacagcaggcctgtgctgcagagagcattatgttgaacctggcagggcagctgatcatg
atgcagagggatcgctctggtcctcaggtccgggagaaagagaccacagccaatcaaaag
aagctgcttccattctgtgcccctgtggtcctggcccagtgcgtggagaacgtgtggacg
acctgccgggccaacaagaataagcgccaccttctggaggcactatggctggcctgcggg
gaagcgggcatgaaagtgtggctgccactcttcccccgggacaaccgcaaaccgcactcc
ttcctgtcgcggcgcatcatgctgcccttccacatcaacatctacccactggcggtgctg
ttcgaggatgccctggtgcttggggccaccaacgaaacggtgctgtacgatgggctgccc
cgggcgggggtggctggggctggtgagcccctggaggcgcttttccccttctgcaccgtg
gagcgcacctcccagatctacctccaccacatcctgaggcagctgctggtgcgcaaccta
ggggagcaggccctgctgttggcccagtcctgtgccggcctgccctacttccctcacgtg
ctggagctgatggtccacgtggtgctggaagaggaagctacctcgcgggaacccattccc
gaccctctgcttcccaccgtggccaagtttattaccgagttccccctcttcctccagacc
atcgtgcactgcgcccggaagaccgagtacgctctctggaactacttgtttgctgccgtt
ggcaaccctaaggacctgtttgaggagtgcctcatggcacaggacctagaaacagcagct
tcctatctaattatcttacagaacatggaggttccagcagtaagcagacagcacgcaaca
ctgcttttcaacaccgctctggaacaggggaagtgggacctgtgccgtcacatgattagg
tttctgaaagccattggctctggagaaacagagacaccaccaaccacaccgaccactcag
gaacccagctcaacgggaggatttgaattctttaggcatcgaagtatcagcttatcacaa
tcggcagacagcctcacagcttggaaattcaacctccagaagacactaagcatgccttca
ggaccgtctgctaaaaggtggagtaaagagagtgaatgtgctgagaacatgtacattgac
atgatgctatggcggcatgcacgacgactactggaggaagtccggctaaaggaccttggc
tgcttttctgcccagctgggttttgagctgattggctggctgtgtaaagaacggacccga
gctgcccgcgtcgatgactttgtgatggctttgaaaaggcttcacgaagacttcctctgg
ccctttccagtcatttctgccagctccataaactccccgttcagaaacggcagatataga
acagttgttggagagcacttgctgaaatcgcattcagcagatagcctgataaacaatgag
atggacaccggtgcctccaacgcccctcgcagccacagctggctggacagtctgaactct
gcctcaagagagatggacaccgcagcacacacacaggaggccttcctctcacctctcctc
aacaaaggtgacgagtgcagcattggctctgcgacggacctcacagagaccagctccatg
gtggatggggactggacgatggtggacgagaatttctccaccctcagtctgacacagtcc
gagctggaacatatgtccatggaactggcaaacaaggggcctcataagtcccaggtgcag
ctgaggtacttgttgcacatcttcactgaggcaggctgcccggagtggtgtgtcatcata
ggcataattatgcgagaggcgtctgtgatcagtcaggtggtcagttgtctccagtctgcg
gaagtcccagttgacactgtgctgaatatcaagaacggcctactggcagtggacgcatgg
gcatcaacagactgtctgggctacaagcctttcctcgacctgatccgaccgcagctccag
aagctagtggaggtgaccccagagcaggtgcagcctgaagctttccagccaaccagcacc
gccaagctggtagagcctgtctgtcctcggccagaggacagccgtgggggccctgcaagc
cacaacaccagctcgcagagtgaggatggcagtggtgccagccggctggaggaggacagc
cctgtggaggaacaagaggagcagcctttagaggagggctcatacgactgcactctgtca
taa
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