Acipenser ruthenus (sterlet): 117409321
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Entry
117409321 CDS
T07327
Name
(RefSeq) E3 ubiquitin-protein ligase RNF38
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arut04121
]
117409321
Enzymes [BR:
arut01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117409321
Ubiquitin system [BR:
arut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117409321
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
zf-RING_UBOX
Dermcidin
zf-RING-like
zf-RING_16
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
117409321
NCBI-ProteinID:
XP_034784452
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All DBs
Position
2:complement(40075366..40204999)
Genome browser
AA seq
547 aa
AA seq
DB search
MEPPRTRSRSRSGFLNHNMTSSYYNNITNSGGHFNQHSPGCDTTGVHPTENQRTAGSNPT
FSNLRAAPTGATRAPSAGGVGATFHCQSVHQEHTCNEDSDKSEDSPSPKRQRLSHSVFDF
TSASPAPSPPMPWEMPLMEKVHPFASQNVLSERSPPVRRQRGRRDRMPRHNSISQDENYH
HLMYGQQQSMEEPRAFHPPSVSPRLLHPAAHPPQPNTVMVDIHEQIHQGTVPVSYTVTTV
APHGIPLCTGQHIPACNTQQVPGCSVVFSGQHYPVCSVPPPMLQACSVQHLPVPYAFPPL
LSSDPFLIHPPHLSHHPPHLPPAGQFVPFQAQQSRSPLQRIENEVELLGDHLSVGGGFTY
PPSVHPTTLPPSAPLQFLSHDPLHQELFGVPYPHFMPRRITGRRYRSQQTLPPPPYHPSF
LPYFLSMLPVQPTMGPAFSLELDVDDGEVENYEALLNLAERLGEAKPRGLMKADIEQLPS
YRFNPNNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADAS
EVHRDSE
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggagccccccaggactcggtcccggtccaggtctggatttctcaaccacaacatgacc
agtagttattataacaatattactaatagcggcggccacttcaaccagcacagccctggc
tgtgatacaactggtgtccaccccaccgagaatcaacgaacagcggggagcaacccgacc
ttcagtaatctgagagctgcacccacaggagccaccagagcaccttcagcaggaggtgtt
ggggctacttttcattgtcagtcagtacatcaggagcacacctgcaatgaagacagcgac
aagagtgaagacagcccgagccccaagcgccagcggctttctcattcagtcttcgatttc
acctctgcctcccctgccccatctccaccaatgccatgggagatgccccttatggaaaaa
gtccacccctttgcctctcagaacgtgctttctgaacgaagccctcctgttaggcgtcag
cgggggaggagggatcggatgccacgacacaactcaatcagccaggacgagaactaccac
cacctcatgtatggacagcagcagagtatggaggagcctcgcgccttccacccccccagt
gtctccccgcgcctgctgcaccctgctgcccaccccccgcagccgaacacagtcatggtg
gacatccacgagcagattcatcagggcacagttccagtctcttacacggtcaccacagta
gctccacatgggattccactttgcacaggccagcacatcccagcatgcaatacacagcag
gtgccaggatgttcagtggtattcagtggacagcactaccctgtgtgcagtgtgcctcct
ccaatgctacaggcgtgctcagtccagcacttgccagtcccttatgcattccctcccctc
ctctcaagcgatccctttctaatacacccgccccacctctctcatcaccctccacacttg
cctcctgcaggtcagtttgtacctttccaggctcagcagtcacgatcgccattacagagg
atagagaatgaagtagagctgctgggagatcacctttctgtgggcgggggtttcacctac
ccgccttcagtgcaccccaccaccctgcctccctcagcaccccttcagttcctctcacat
gatcccctccaccaggagctcttcggagtaccttatccacacttcatgcctagaagaatc
acaggtcgcagatatcgatcccagcagacattgcctcctccgccctatcaccccagcttc
ctgccgtacttcctctcaatgcttccagtgcagcccactatgggaccagcctttagttta
gaacttgatgtggatgatggcgaggtagaaaactatgaggccctgctaaacctggcagag
cgactaggagaagccaaacccaggggtctgatgaaggcagacatcgaacagcttccatcc
tacaggtttaaccccaacaaccaccagtctgaacagaccttgtgtgtagtttgtatgtgt
gattttgaatccagacagctacttcgagtcttaccctgtaaccatgagttccatgccaag
tgtgttgacaaatggctaaaggcaaaccgtacctgtccaatctgcagagcggatgcttca
gaagtgcatcgtgattcggaatga
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