Acipenser ruthenus (sterlet): 117409401
Help
Entry
117409401 CDS
T07327
Symbol
myo5b
Name
(RefSeq) unconventional myosin-Vb isoform X1
KO
K10357
myosin V
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
117409401 (myo5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arut03019
]
117409401 (myo5b)
04131 Membrane trafficking [BR:
arut04131
]
117409401 (myo5b)
03029 Mitochondrial biogenesis [BR:
arut03029
]
117409401 (myo5b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
arut04812
]
117409401 (myo5b)
Messenger RNA biogenesis [BR:
arut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
117409401 (myo5b)
mRNA cycle factors
P-body specific factors
117409401 (myo5b)
Membrane trafficking [BR:
arut04131
]
Others
Actin-binding proteins
Myosins
117409401 (myo5b)
Mitochondrial biogenesis [BR:
arut03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
117409401 (myo5b)
Cytoskeleton proteins [BR:
arut04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
117409401 (myo5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
AAA_22
nSTAND3
Motif
Other DBs
NCBI-GeneID:
117409401
NCBI-ProteinID:
XP_034779108
LinkDB
All DBs
Position
1:89268322..89418303
Genome browser
AA seq
1845 aa
AA seq
DB search
MSVNELYTKYTRVWIPDPEEVWKAAEIIKDYKEGDPILHLKLEDESTIEYAINPKTNQLP
FLRNPDILVGENDLTALSYLHEPAVLHNLKVRFLESNHIYTYCGIVLVAINPYEQMSIYG
EDVIYAYSGQNMGDMDPHIFAVAEEAYKQMARDEKNQSIIVSGESGAGKTVSAKYAMRYF
ATVGGSASETNVEEKVLASSPIMEAIGNAKTTRNDNSSRFGKYIEIGFDRHFHIIGANMR
TYLLEKSRVVFQAEEERNYHIFYQLCASAKLPEFKDLALNSAEDFFYTTQGGNIYIDGVD
DAEDFEKTRHAFTLLGVKEAHQISIFKIIASILHLGNVEVRAERDGDSCSISKEDDHLNH
FCELLGVEHDQMEHWLCHRKLVTTAETYVKTMSMQQAVNARNALAKHIYAQLFNWIVEHI
NKALHTTSKQHSFIGVLDIYGFETFEFNSFEQFCINYANEKLQQQFNSHVFKLEQEEYMK
EQIPWTLIDFCDNQPCIDLIEAKLGVLDLLDEECKVPKGTDQNWAQKLYDRHSNSLHFQK
PRMSNTSFIIIHFADKVEYQCDGFLEKNRDTVYEEHISILKASKFQLVADLFHDGKDPVP
ATSTTKTSKINVRSAKQIPKATNKDHRKTVGHQFRNSLSLLMETLNATTPHYVRCIKPND
EKLSFSFDPSRAVQQLRACGVLETIRISAAGYPSRWTYPDFFNRYRVLMKKKEIVLSDKK
LTCKNLLENLVKDPDKFQFGRTKIFFRAGQVAYLEKLRADKFRFACIMIQKSVRGWLQKV
KYRKIKKAAMTMQRYGRGYLARRLADQLRKTRAAIVFQKQYRMLRVRRAYLKIRNATITI
QAYARGMFVRQLYHEFLLHHKAMVIQKYARGWMERKKFKRARNAAVVIQCSYRRLQARRE
LKQRKIEARSAEHFKKLNVGMENKIVQLQRKVDEQSKEYKSLNEQLSVANTAYSVEVEKM
RKELEQYRGKKGEGNQISSLQEEVQRLQTKLNKAQTEKKQLEDIYYTEKEDLLKRLADLE
EENALLKHDKEEMNQRILSQSKDSEDQVTSKTLKESQQKAELDDERARYQNLLKEYSRLE
QRYDNLQEETSLARFHPGHRRNPSNQSSLGSDSNYPSITSEIGDTEDTLQQVEDMGMEKA
AMDITVFLKLQKRVRDLEQERRRLQIDLEKMEELAKRKGNEDKNTADPDHDTDSAYNSLK
RQELESENKKLKNDLNELRKAIVDRATQNNSSNELQDSYNVLLNQLKSANEELDVRKEEV
LNLRTQIVSCSQQKEPITPIETKKMPDWSNSNKHMNRDDAIEAYQGICETNNKAQDWGYL
NEDGELGLAYQGLKQVARLLEAQLQSQSRQYEDEMEALRTQIEVFRDEIERKQELLSQTL
QLSPEAQVEYSVQQEITRLTNENLDLKEMVEKLQKNEKKLKRQLKIYMKKVHELEAAEPA
VQPERRRHELTRQATVQRKEKDFEGMLEYYKEDENLLVKNLVTDMKPQVVSATVPCLPAY
ILFMCIRHADYMNDDQKVHSLLTSTINAIKKVLKKHNDDIEMTSFWLANTSRLLHCLKQY
SGDEAFMTQNTAKQNEHCLKNFDLAEYRQVLSDLSIQIYQQLIKVAEGILQPMIVSAMLE
NESIPSLSGVKPMGYRKRSSSMVDGENSYSLEAVIRQLNAFHATMCDHGLDPEIIQQVFK
QLFYMISAVTLNNLLLRKDVCSWSTGMQLRYNISQLEEWLRGKNLQQSGAVGTMEPLIQA
AQLLQVKKKTTEDARAICSLCTSLSTQQIVKILNLYTPLNEFEERVTVSFIRNIQGQLQG
RNDPQQLLLDFKHTFPVLFPYTPSALSLETLHIPASLNLDFLTRV
NT seq
5538 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtgaatgagctctacaccaagtacacaagggtgtggatccctgaccctgaagaa
gtttggaaggcagctgaaattatcaaggactataaggagggagatccgattctacatctc
aaattggaagatgagtcgactattgaatatgccattaacccaaagaccaaccagctgccg
ttcctccgaaacccggatatcctggtgggggagaatgacctgacagcgctaagttacctc
catgaacctgcagtccttcacaacctgaaggtgcgctttctggagtccaatcacatctac
acatactgtggaattgtgctggttgccattaacccgtatgaacagatgtccatctatgga
gaagatgtcatttacgcttacagtgggcagaacatgggtgacatggatccccacatcttc
gcagtggcagaggaggcttacaagcaaatggccagagatgagaagaaccagtccattatt
gtgagtggggagtctggggcagggaagacggtgtctgcaaaatacgccatgcgttacttc
gctacagtcggtgggtcagccagcgagaccaacgtagaggagaaggtgctggcgtccagt
ccaattatggaggcaattggaaacgccaaaacgacaagaaatgacaacagcagccgcttt
ggaaaatatatcgagatcggcttcgatcgccactttcacatcatcggtgccaacatgaga
acttatcttctggaaaagtcaagagttgtcttccaggcagaagaagagagaaattaccat
atattctaccagctgtgtgcctccgccaagctacctgagtttaaggacctagccctgaat
agtgcagaggacttcttctacaccacccagggtggtaacatctacatcgatggggttgac
gatgccgaggactttgaaaagacaagacatgctttcacattgctaggtgtcaaggaagct
catcaaattagcatatttaagataatcgcatcaatcctccatctgggaaatgttgaagtc
cgtgcagaaagagacggggattcgtgcagtatctcaaaagaagacgaccatctcaaccac
ttttgcgagttgctgggagtggagcacgaccagatggagcactggctgtgccaccgcaag
ctggtgactacagcagaaacttacgtcaagaccatgtccatgcagcaggcggtcaatgcc
aggaacgctcttgccaaacatatctacgcccagctcttcaactggattgtggagcacatc
aacaaagcccttcacaccaccagcaagcagcactccttcattggagtgctggatatatac
gggtttgagactttcgaattcaacagttttgagcagttttgcatcaactatgccaatgaa
aagctgcagcagcagtttaattctcatgtcttcaaactggagcaggaagaatacatgaag
gaacaaatcccctggactcttatagatttttgcgacaaccagccctgcattgacctcatt
gaggcaaagctgggtgtgctggacttgctggatgaggagtgcaaggtgccaaaaggaact
gatcagaactgggcccagaaactctatgacaggcattctaacagcctgcactttcagaag
cccaggatgtccaacacctcttttataattattcactttgctgataaggtggagtaccag
tgtgatggttttctagagaaaaaccgggacacagtgtatgaagaacatatcagtattctg
aaagccagtaagttccagctggtggccgaccttttccacgatggcaaagatcctgttccc
gccacatccaccacaaagacttcaaagatcaatgtccggtctgccaaacagatccccaaa
gcgacaaataaggaccacaggaaaaccgttggccatcagttccgaaactcacttagttta
ctaatggaaacactgaacgccacaactccccactacgtacgttgtatcaagcccaatgat
gagaaactttctttctcgtttgatcccagcagagcagtgcagcaactgagagcctgtggt
gtgttggagaccattcgtatcagtgcagccggatacccttccaggtggacataccctgac
ttctttaacagatacagagtattgatgaaaaagaaggaaattgttctttcggacaaaaag
ctcacctgcaagaatctgctggagaacctggtgaaggatccagacaagttccagtttgga
agaaccaagatcttcttccgcgctggtcaggttgcttacctggagaagctacgagcagat
aagttccgctttgcctgcatcatgatccagaagagcgttcggggctggctgcagaaagtg
aagtacaggaagatcaagaaggccgccatgacaatgcagagatatgggcgtggctatctg
gcacgcagattggcggatcagcttaggaagacacgagccgcaattgtgttccaaaagcaa
tacaggatgctgcgtgtccgcagggcctacctgaagattcgaaacgccacgattaccatc
caggcttacgcgagaggcatgtttgtcaggcagctttaccatgagttcttgttgcaccac
aaggcaatggtcattcagaagtatgcgagaggctggatggaacgaaagaagttcaagcgt
gcccgaaatgcagccgtcgtgatccagtgttcctaccggcgtctgcaggcccgacgtgaa
ctgaagcagcgaaagatagaggcgcgctcagctgagcacttcaaaaagctcaacgtcggc
atggagaacaagatagtgcagctacaaaggaaggtggatgagcagagcaaggaatacaag
agcttgaatgagcagctgagtgtggctaacacggcttactctgtggaagtggagaagatg
cgcaaggagctggagcagtaccgaggcaagaagggtgaagggaaccagatcagcagcctg
caagaggaggtgcagaggctccagaccaagctgaataaggcacagactgagaagaagcag
ctggaggacatatactacactgagaaagaagatctactaaagagattggcagatctcgag
gaagagaatgcactactgaaacatgacaaagaagagatgaaccaaagaatactgagtcag
tctaaagactctgaagaccaggtcaccagcaagacactgaaggaaagccagcagaaagct
gaactggacgatgagagggcgcgctatcagaacctgctgaaggagtattcccgacttgag
cagagatacgacaacctccaggaggagacgtccctggccaggtttcatccaggacacagg
agaaacccctccaaccagagcagcctgggctcagactccaactacccgtccatcacctct
gagatcggagacacggaggacaccctacagcaagtggaggatatgggcatggagaaggca
gccatggacataacagtgttcctgaagctgcagaagagagtgagagatctggagcaggag
agacgcagactacagattgacctggagaagatggaagagctggccaaaagaaaggggaat
gaggacaagaacacagcagatccagaccatgatacagattctgcctacaacagtctaaag
agacaggaattggaatcagaaaacaagaagttgaagaatgatctgaatgaactgaggaaa
gccattgtggacagagccacccagaacaattcctccaatgaacttcaagatagctacaac
gtgctgctcaaccagctcaagtcagccaatgaggagctggacgtgcgcaaggaggaggtg
ctgaacttgagaacacagatagtgagctgctcccagcagaaagagcccatcacacccatt
gaaaccaagaaaatgcctgactggagcaacagtaacaaacacatgaacagagatgatgcc
attgaggcctatcagggaatctgtgagactaacaacaaggctcaggactggggctacttg
aatgaagacggggagcttggcctggcctatcagggtttaaagcaagttgccagactcctg
gaagcccagctgcagtctcagagcaggcagtatgaagacgagatggaggcgctgcgcact
cagatcgaggttttcagggacgagatcgagaggaagcaggagctgctctcccagaccctg
cagctctcccccgaggctcaagtggagtacagcgtacagcaggagatcacacgcctcacc
aacgagaacctggacctgaaagagatggtagagaagctgcagaagaacgagaagaagctg
aagagacagctaaagatttacatgaagaaggttcacgaactggaggctgccgagcctgca
gtgcagcctgagaggcgtcgccatgagctgactcggcaggcgacggtccagaggaaggag
aaggatttcgagggaatgctggagtattacaaggaagacgagaacctgctggtcaaaaac
ctcgtcacagatatgaaaccccaggtggtatcagccacagtgccctgcctgccagcctac
atcctcttcatgtgcatcaggcacgcagattacatgaacgacgaccagaaggtccactcc
ctgctcacctcgaccatcaacgccatcaaaaaagtattaaagaaacacaatgacgacatt
gagatgacctccttctggttggctaacaccagccgcctcctgcactgtctgaagcagtac
agcggagatgaggccttcatgacccagaacacagccaagcagaacgagcactgcctgaag
aacttcgacctggcggagtacaggcaggtcctcagcgacctctccattcagatctaccaa
cagctcatcaaagtggcagagggtatcctgcagcccatgatagtgtctgccatgctggag
aacgaaagcatcccaagcctttctggtgtcaagcccatgggttacaggaaacgctcctcc
agtatggtagacggagaaaacagctactccctggaggccgtcattcgccagctgaacgcc
ttccacgccaccatgtgtgaccacggcctggaccccgagatcatccagcaggtcttcaag
cagctcttctacatgatcagcgcagtgacgctcaacaacctgctgctgaggaaggacgtg
tgctcctggagcactgggatgcagctcaggtataacatcagccagctggaggagtggctg
cgggggaagaacctgcagcagagcggagcggtgggcaccatggagcccctcatccaggct
gcacagctgctgcaagtgaagaagaaaaccacagaagatgccagagccatctgctccctg
tgcacatcactctccacacagcagattgtgaagatactgaatctgtatactccattgaat
gagtttgaagaacgtgtaacagtgtctttcattagaaatatacagggtcagctacaaggg
cgcaacgatcctcagcagctgctgcttgacttcaaacacacgttccctgtccttttccct
tacaccccatcagctctcagcctggagaccttgcacataccagccagcctgaacctggac
ttcctaaccagggtttga
DBGET
integrated database retrieval system
