Acipenser ruthenus (sterlet): 117409598
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Entry
117409598 CDS
T07327
Name
(RefSeq) LIM and calponin homology domains-containing protein 1-like isoform X1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
arut04990
]
117409598
Domain-containing proteins not elsewhere classified [BR:
arut04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
117409598
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
Motif
Other DBs
NCBI-GeneID:
117409598
NCBI-ProteinID:
XP_033871765
LinkDB
All DBs
Position
2:complement(101711000..101845868)
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AA seq
1979 aa
AA seq
DB search
MASPGLEVEGNQQQHRDASHEPAVYEARKWIEAVTGRCFGEKGFRSGLENGILLCELLNS
IKPGLVKKVNRLPTPIAGLDNITLFLRGCEELGLKGTQLFDPSDLQDTSIRANIKGSDCC
RKLKNVLITIYWLGKAANSCASYSGPTLNLKEFEGLLSQMRKEAEDLESPKRSIRDSGYI
DCWDSERSDSLSPPRHGRDDSFDSLDSFGSRSQQTPSPDVVIRGSSDGRGSDSESDVPHR
KMPDTRKDDMLARRTSCNEPRSAMPFNQYLPNKSNHSAYVPTPLRKKAADGEEFRKSWST
ATSPIGGERPFSHPETIEEENCEDDGRAPCKRRGGPEDDPRAVTSRVDNIQCQEIGQSQS
QTDGPKKSLQHMWEGKDEEEVKRLQRLEKAGIRVLPASVRYSSPKPASEESQPAPPDIIL
RRENDFLKSQQERESDSEEEEQRLPDIEKDDLASRKARMNQLKPKVPHNQFLPMPCSKSE
EKLENIKKATHRVTSSSLDRQLQGVTSESQTQVPSPGPSEILTRRENPFLKPLQNDSEEE
EQGGQVTVPNVQRDDLAKRRAQGGPAPYRETQPFVKASITQSDLEKWERLKLSTDTSESQ
TQVPSPGPSEILTRRENPFLKPLQNDSEEEEQGGQVTVPNVQRDDLAKRRAQGGPAPYRE
TQPFVKASITQSDLEKWERLKLSTDTSESQAQVQVQSPSPSEILTRRENPFLKPLQNDSE
EEEQGGQVTVPNVQRDDLAKRRAQGGPAPYRETQPFVKASITQSDLEKWERLKLSTDTSE
GTSKPLCQACMDKGLPAIEAETAALDDLASRRARANRKALGSKQRFVHFGPVTEIDQKCW
EKLSIARAESESESAGYGSHSEAEASRCLVSAASSSIQHIEQVASEPQQSFIAKYCPGSF
SFVQAVCTPTRQEGAQRPAETQEDSEEGGQEERQPNPEKDDMLARRTGAFQKTSSSPTYN
KFLPMPASLQQKKEGTKGTIKEEMTKQRLDCILTSSALSSPEDQYRQVTPTSTATVSVTT
KESPRTTGTFLQLRKREMAKEEEEQEEEAVKESFPDLEKDDMMSCRALAFHRQTATAASQ
FLPVPASQQTGTSEVSQCLPVPASQQTRTSEASKDDDKPRRRPSWLDDDLPPTYSHRASV
SDDAESMSMIDMRCEEEAILQPHSKARHEHLHDLHNRLREEEDKWQDDLARWKNRRRSAS
QDLIKKEEERKKVERLMSGDRDLSERRKSIKTYREIVEEKERREKELHEAYKNARSPEEA
ETILRRYTQRFTVSEAVLEGLEMPKFLQRSLSVDSDTPLSPTKEASNPMKYLRQQSLPAP
KFTATVEATISVVPQPQVSPPQTSPTQTVSTKAVPILSPKPYSQPKNSQPGLRSFTVDGI
VRVNGEAFSGAEAEKESTPVKIPPTKSQGIESTARVNTAPVKSHTSPFKSQENTEVNTSP
AKIHLESRVDASPVSSPEKPPVNSQKDTCGMDSAPARPTSLLTDPCRENLLSGEQGLYLK
TQQDKETEPSQKDEERAVQALETPTRSVEISVVTEQKDDDNENSPREGHLNVNYQSTAVL
NTVQYSLTTKQPEQKNVASEKRQVSPTEILTSYLPVKKELTSSGSALPRGWESCVHREFF
TQSDSGPSEENSNIPVPPFSLPKRNDYWSWDPEEERKRQERWQQEQERLLQEKYQREQEK
LKQEWERAQKEVEEEERRYHEEERKILEETVAPLTPRSSTLSSPSRSDQPLLPLDPEGPI
VMSLADWERKQELLEKQAQRSKAEACEKDEKPRQTTNQQAVAKEQEPTVKTEEQVKVTES
SHSHTETLAQSKKNSQKLLSDNSNPAASELEFISGASWNNKQPRTKQPVEVWRKTASLDR
SWSQTAVAGGMKRSGSYENLGTTPSKSSPCSPNLQTQSPNRSISGKKLCSSCAQPLGKGA
AMIIETLSLYFHIQCFKCGVCKGHLGDTTTGTDVRIRNGILNCNECYIRSRTAGQPTTL
NT seq
5940 nt
NT seq
+upstream
nt +downstream
nt
atggccagtcctgggctagaagtagaaggaaaccagcagcagcaccgggacgcgtcccac
gaacccgcagtctacgaggctcggaagtggatcgaggcagtcacaggcagatgttttgga
gagaagggatttcgcagtggtctggaaaatggaatcctgctatgcgagttgttgaattct
ataaaacctgggcttgtgaagaaggtcaatagactcccaacccctatagcaggactggac
aatatcaccttattcctgagaggctgtgaagagcttggcttgaaaggcacacaacttttt
gaccccagtgatcttcaggacacctccatcagggctaacatcaaggggtctgactgctgt
cgaaaactgaaaaatgtgttgatcactatatactggctgggaaaagctgccaatagctgt
gcctcgtatagtgggccaacgctgaacctgaaggagtttgagggactgctgtcacagatg
cgcaaggaggctgaagacctagaaagccccaaacgcagtattcgtgacagcggctacata
gactgctgggactcggagcgcagtgattcactctcgccaccccggcacggcagagacgac
tccttcgacagcctggattcgttcggatcacgctcgcagcagactccctctcccgatgtg
gtgatccggggcagcagcgatggtcgcggtagtgattctgaatcagatgtgccacacagg
aagatgccggacacgaggaaagatgacatgttggcacggaggacatcttgcaacgagccg
agatcggcaatgcccttcaatcagtacctgccaaacaagagcaaccactcggcctacgtc
cccacacctctgcgcaagaaggcggcagacggggaggagttccgcaagagctggagcacc
gccacgtcgcccatcgggggagagcggcccttcagccaccccgaaacaatcgaggaagaa
aactgtgaagatgatggcagggcaccatgcaagagacgtggagggccagaggatgacccc
agagcagtgacgtctcgggtagataacattcagtgtcaagaaatcggacaaagccagtcc
caaactgatgggccgaaaaagagcctacagcacatgtgggagggaaaggatgaggaggaa
gtgaaaaggctgcagaggcttgagaaggctgggatcagggtcttgcctgcatcggtgcgc
tacagcagcccaaagccagctagtgaagaaagccagcccgcccctccggatataatcctc
cgtcgagagaacgactttctaaagtcccagcaggagagggagtccgactcggaggaggag
gagcagagactgccagacatcgagaaggacgacctggcttccaggaaagccagaatgaac
cagctcaaacccaaagttccacacaaccagtttttgccaatgccgtgctcaaagagtgaa
gaaaaattggagaacatcaagaaagccacccaccgcgttacaagcagctcactagatagg
caactgcaaggcgtgaccagtgagagtcagacccaggtcccgtccccaggccccagtgag
atcctcacgaggagggagaaccccttcctcaagcccctgcagaatgactctgaggaggag
gagcagggggggcaggtgaccgtccccaatgtgcagagagatgacctggccaaaaggaga
gctcagggcggccctgccccctacagagagacccagccctttgtaaaggcctccattact
cagtctgacctggagaaatgggagagactcaagctatccacagataccagtgagagtcag
acccaggtcccgtccccaggccccagtgagatcctcacgaggagggagaaccccttcctc
aagcccctgcagaatgactctgaggaggaggagcagggggggcaggtgaccgtccccaat
gtgcagagagatgacctggccaaaaggagagctcagggcggccctgccccctacagagag
acccagccctttgtaaaggcctccattactcagtctgacctggagaaatgggagagactc
aagctatccacagacaccagtgagagtcaggcccaggtccaggtccagtccccaagcccc
agtgagatcctcacgaggagggagaaccccttcctcaagcccctgcagaatgactctgag
gaggaggagcagggggggcaggtgaccgtccccaatgtgcagagagatgacctggccaaa
aggagagctcagggcggtcctgccccctacagagagacccagccctttgtaaaggcctcc
attacacagtctgacctggagaaatgggagagactcaagctatccacagataccagtgag
ggaacctcaaagcccctttgccaggcttgcatggacaagggtctgcctgcgatagaggca
gagactgccgctctggatgatctagccagccgcagggccagagcaaacagaaaggctctg
ggcagcaagcaacgttttgtacattttggcccggtgacagagatagatcagaaatgctgg
gagaagctcagcattgccagggccgaatcggagagtgagtcggcaggatatggaagccat
agtgaagctgaagccagcagatgtcttgtttcggctgctagctctagcattcagcacatt
gaacaggtcgccagtgagcctcaacagtcattcatagccaagtattgccccgggagcttt
tcatttgtgcaagcggtctgtactccaactcgacaagagggggcacagcggcctgccgag
acccaagaggacagtgaagaggggggacaggaggagaggcagcccaatcccgagaaagac
gacatgttggcacgcagaactggggccttccagaaaacaagcagcagccccacttataac
aagttccttcctatgcctgcgtccttgcagcaaaagaaagagggcaccaaagggactata
aaagaggagatgacaaagcagaggttagactgcatattgactagctctgccttatcgagc
ccggaggatcagtacagacaagtgacacctacttccacagcaacagtcagtgttactacc
aaggagagtcctcggacaaccggaacgtttcttcagttgaggaaacgggagatggcaaaa
gaggaggaggaacaggaggaagaggcggtgaaagagagttttccagatttggaaaaagat
gacatgatgtcctgtcgtgcactggctttccacagacagacagcaactgctgccagtcag
ttcctcccagtcccagcctctcagcagactgggacaagtgaggtcagtcagtgcctccca
gtcccagcctctcagcagactcggacaagcgaggccagcaaagacgatgacaagccacgg
aggaggccatcttggttagatgacgatctcccaccaacatacagccacagagcttctgta
tctgatgatgcagaaagtatgagcatgattgatatgaggtgtgaggaggaggcgatcctg
cagccgcacagcaaggctcgccatgagcatctgcacgatttacacaaccgcctacgagaa
gaggaggataagtggcaggatgacttggcccgctggaagaaccgaaggagaagtgcgtct
caagacctgataaagaaggaggaggagaggaagaaggtggagaggctaatgagtggagac
agggacttgtcagaaaggaggaaaagcatcaagacctacagggagattgtcgaggaaaag
gaacgcagagagaaggagcttcacgaggcttacaaaaacgcgaggagtcccgaggaagcc
gagaccatcctgcggcgctatactcagcgctttacagtcagcgaggctgtcctggaggga
ctggagatgccaaagttcctgcagaggagtctgtctgtggattcggacacccctttgtcc
cccacaaaggaagcctccaaccccatgaagtacctgcggcagcagtccctgccagccccc
aagttcacagcgaccgtggaggccaccatctcagtggtgcctcagcctcaagtcagcccc
ccacagacctctcccactcaaactgtttcaaccaaggcagtgcctatcctgagccccaag
ccgtactcgcagcccaagaactcccagccaggactgcggtcattcacggtggatgggata
gtgagagtgaatggagaggcattcagcggagcagaggctgaaaaggaaagtactccggta
aagattccccccaccaaatcacaggggattgaaagtacagccagggtgaatacagcccca
gtgaaatcacatacgtctccgtttaagtctcaagagaatactgaggttaatacatcgccg
gcaaagatccatttggagagcagggtcgatgcctctccagtcagctcgccagagaaaccc
ccagtaaattcacagaaggatacctgtggaatggactctgcaccagcaaggccaacatca
cttctaactgatccatgcagagagaaccttttgtctggtgagcaggggttgtatctaaaa
acccagcaagataaggagactgagccgtcacaaaaagatgaggagcgtgctgttcaggcc
ttagaaactccgaccaggtctgttgagatcagtgtggtgactgagcagaaggatgatgat
aacgagaactcccctagagaaggacacctgaatgtgaactatcagagcactgctgtactg
aacacagtgcagtactcgctgacaacaaagcaaccagaacagaaaaatgttgcatcagag
aagaggcaagtgagccccactgaaatcctaacgtcatacctgccagtcaaaaaagagttg
acaagcagtggcagtgctctgcccaggggttgggagtcctgtgtacatcgggagtttttc
acccagtcagattccggcccaagtgaggaaaactcaaatatcccagtccctccattcagt
ctgcccaaacgcaatgactactggtcctgggacccagaggaggagcgcaagcgtcaggag
agatggcagcaagagcaggaacgcttgcttcaggagaagtaccagcgggagcaggagaag
ctgaagcaggagtgggagagagcccagaaagaggtggaggaggaggagcgcaggtaccat
gaagaggaacgtaagattcttgaggagacagtggcccctttgacaccccgttcgtccaca
ctgtcctcccccagccgcagtgaccagcctcttctccccctggaccccgagggccctata
gtgatgtcgctggcagactgggaacgtaagcaggagctcctggagaaacaggcgcagagg
tctaaggcagaagcttgtgagaaggatgaaaagccaaggcaaactactaatcagcaggct
gttgctaaggaacaggagcccactgtgaagacagaagaacaagtgaaagtgacagaaagt
tcacactcgcacacagaaacacttgcccagagcaagaaaaacagtcagaagcttctctca
gacaacagtaatccggcagcttccgaactcgagttcatttcaggtgcatcatggaacaac
aagcagccccgtacgaagcagccagtggaggtctggagaaagacggcctctctggatcga
agctggagtcagaccgccgtcgcgggaggaatgaaaaggtctgggtcctatgaaaattta
ggaacaaccccatctaagtcatctccatgttcacctaatcttcaaacccagtcacccaac
aggtctatcagtggaaagaagctgtgttccagttgtgcacaaccccttggaaaaggagct
gccatgatcattgagacactcagcctctactttcacatccagtgcttcaagtgtggggtc
tgcaagggacatctaggagatacaaccacagggacggatgtcaggattcgcaatggtatt
ctgaactgcaacgagtgttacatcagatcccgaactgctgggcagcccacaacattgtga
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integrated database retrieval system
