Acipenser ruthenus (sterlet): 117409619
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Entry
117409619 CDS
T07327
Name
(RefSeq) replication factor C subunit 1-like
KO
K10754
replication factor C subunit 1
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03030
DNA replication
arut03410
Base excision repair
arut03420
Nucleotide excision repair
arut03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117409619
03410 Base excision repair
117409619
03420 Nucleotide excision repair
117409619
03430 Mismatch repair
117409619
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
arut03032
]
117409619
03400 DNA repair and recombination proteins [BR:
arut03400
]
117409619
DNA replication proteins [BR:
arut03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
117409619
DNA repair and recombination proteins [BR:
arut03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
117409619
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
RuvB_N
AAA_33
BRCT_2
Rad17
AAA_17
AAA_30
AAA_5
AAA_18
RNA_helicase
nSTAND3
AAA_16
AAA_14
AAA_7
NTPase_1
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
117409619
NCBI-ProteinID:
XP_033871798
LinkDB
All DBs
Position
2:102412556..102439566
Genome browser
AA seq
1099 aa
AA seq
DB search
MDIRKFFVVKQQKNPASETAKNGKPKSECGGKKQPDLSKVKSLNSDDDDDSAKKTKQRGN
KKKRVIIDTDSEEDVPVKKHRKPSKESPSESKSSSKPAHPPKKDPVVYVSETDEEDNFES
LKQPQKRKENGLSASSRPGSTGRAVEVKPPAKPVEVKPPAKAVTPAKCTPMSVFEYFGGS
SVQRSDKKLVATTKRKAPTGSTDDSTNEDEAIARQLQMDEDAELERQLHEDEDFARTLAM
LDEPPKPKKARKDSASLPVKTSPGKPDGATIKQEEPSVSARDSPSKKPSPSKASSKLALM
KRKEETLKKETPVKEKTVSPKKEEMVTPKTERMSPKKSESNSPEDSEKKRHNVQAYRNYL
NRDGPRALGSKEMPKGADNCLEGLVFVLTGVLESMERDDAKSLIERYGGKVTGNISKKTS
YLVLGRDSGVSKTEKAESLGTKILDEDGLLDLIRKQPGKRSKYEIAAQAENKKSMLVTPE
KPAKRAGSAKRETPTPPKRGSSPSTVAGKKSLSFQQSSLEKVETPAPSESKGESLLWVDR
YKPNSLKNIIGQQGDQSCANKLLRWLRNWHHNAASDKKPAAKFSKFGGKDDGSTFKAALL
SGPPGVGKTTTAALVCEELGFSYVEQNASCTRSKNSLKVVIAESLNNTSIKNFYSGTSQT
VSSKHVLIMDEVDGMAGNEDRGGIQELIGLIKNTKIPIICMCNDRNHQKIRALVNYCFDL
RFQRPRVEQIKGAMMSIAFKEGLKVPPPALNEIILAANQDIRQVLHNLSMWSARDKVFTY
DQAKSDSSNARKDIKMGPFDVCRKVFAAGDEAAHMSLIDKSDLFFHDYSLAPLFVQENYV
HVRPAAAGGSVKKHLMLLSRTADSICDGDLVDRQIRSRQMWTLLPTQAIYASVLPGELMR
GYMSQFPTFPSWLGKFSATGKHDRIIQELSMHMCLRTQASKRAVNMEYLPFLRDSLVRPM
AGRGAEGVPEAVQLMDDYCLMKEDVDNIMEISTWGGRPDPFSKLDPKVKSAFTRTYNKEV
HLTPYSLQAVKKGKRGAGSTVDLGDEFGTEDTQPEEKESEDTIETDAMIKQKKAKSSKST
KEAKTSDSGKGKGKAKKTK
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atggatattcggaaattctttgtggttaagcagcaaaaaaaccctgcaagcgagacggca
aagaatggtaaacccaaaagtgaatgtggaggcaagaagcagcctgacttgtccaaggtg
aagagtctgaacagtgatgatgatgatgattctgcaaaaaaaacgaagcaacgaggaaac
aagaagaaacgcgttatcattgacacagattctgaagaagatgtgccagtaaagaagcac
aggaaaccgtctaaggaatcccccagtgaatccaagtcttcatccaaacctgcacaccct
cccaaaaaagaccctgttgtatatgtttcagaaacagatgaagaagacaactttgaatct
ttaaaacagcctcagaaacgcaaagagaatggcctgtctgcttccagtcgtccaggcagc
actggaagagcagtcgaagtgaaaccccctgctaaaccagttgaagtgaagccccctgct
aaagcagtgactccagcaaaatgcactcctatgtcagtgtttgagtactttggaggcagc
agtgtgcagaggtcagataaaaagctagtggccaccaccaagagaaaagcacccacaggg
agcacggatgactccactaatgaagatgaggctattgcccgccagcttcagatggatgag
gatgcagagctggagagacaacttcatgaagatgaggattttgcaaggacgctggcaatg
ctggatgagcccccaaaacccaaaaaggcaagaaaggactctgcatctctacctgttaag
acaagtccaggcaaaccagatggagccactatcaaacaagaagagccgagtgtcagtgca
agggactccccttccaagaaaccctcgcccagtaaagccagctccaagttggcgcttatg
aaacggaaagaagaaacattgaaaaaggagacgcctgtgaaagagaagactgtttcaccc
aagaaagaagaaatggtcacccccaaaacggagagaatgtcgcccaagaaatctgagtct
aacagtcctgaagactcagaaaagaagcggcacaacgtgcaggcttatcggaactacttg
aacagagatggcccaagagcacttggatcaaaagaaatgcccaaaggtgcagataattgc
ctggagggtctggtgtttgtgctgacgggggtcctggagtccatggaacgagatgatgcc
aagtccctgatcgagcgatacggtgggaaggtgaccggaaacatcagcaagaagaccagc
tatctggtgctgggcagagacagtggtgtgtctaaaacagaaaaggcggaaagtttgggg
accaaaattcttgatgaagatggcctgctggatctgattcgcaaacagcctggcaagaga
tccaagtatgagatagctgctcaagctgagaataagaagtccatgctggtaaccccagag
aagcctgcaaagcgggcagggtctgcaaagagagagactcccacgcctccgaagagaggg
agctcccccagcactgtggcagggaagaaaagcctgtccttccaacagagctcactcgag
aaggtggaaactccagccccgagtgaaagcaaaggggagagcctgctctgggtggacagg
tacaagcccaactccctgaagaacatcatcggacagcagggagaccagagctgtgccaat
aagctcctacgctggctccgcaactggcaccacaacgctgccagtgacaagaagcctgca
gcaaaattcagtaaatttggtggaaaagacgacggctccaccttcaaggcagccttgctg
tcgggtcctcctggcgtgggtaaaacgaccacagctgcgctggtctgtgaggagctggga
ttcagctacgtggagcaaaacgccagctgcacccgcagtaagaacagcctgaaggtggtg
attgcagagtccctgaacaacaccagcatcaagaacttctattcaggcacctctcagacg
gtgagcagcaagcatgtgctgatcatggatgaagtggatggaatggcaggcaatgaagac
cgaggtggaatccaggaactcattggtcttattaaaaacacaaagatccctattatctgc
atgtgtaacgatcggaatcatcaaaagatcagagccttggtcaactactgctttgatctc
cgcttccagaggccacgagtggagcagattaagggtgccatgatgtcgatcgctttcaag
gaaggtttaaaggtcccacccccggctctaaatgaaatcatattggctgctaaccaggac
atcaggcaggtgcttcacaatctcagtatgtggtctgcccgagataaagtgtttacttac
gaccaggccaaaagtgattccagtaatgccaggaaggatattaagatgggcccctttgac
gtctgccgaaaggtgtttgctgctggggacgaagctgctcatatgtccctgatagacaag
tccgatctcttcttccatgactactctctggcacctctctttgttcaggagaactatgtc
catgtcaggccagcagcagcaggtggcagtgtaaaaaaacacctgatgctcttgagtaga
actgctgacagtatttgtgatggagatctggtggacagacagattcgctctagacagatg
tggaccctgttacctacacaggctatttacgccagcgtcctccccggagagctgatgaga
gggtacatgtcacagttccctaccttccccagctggttaggaaagttttcagcaacgggc
aaacatgaccgcatcattcaagaactttcaatgcacatgtgtctgaggacccaggccagt
aagcgggcagtgaacatggagtaccttccattcctgagggactctctggtgaggccgatg
gcagggcgtggggcggagggggtcccagaggctgtgcagctcatggatgactattgcctc
atgaaggaggacgtggacaacatcatggagatcagcacctgggggggccgcccagacccc
ttctccaagctggacccaaaggttaagtctgccttcacccgtacctacaacaaggaggta
cacctaaccccgtactcactgcaggctgtaaagaagggaaaacgtggagcaggctcgacc
gtggatctcggagatgaatttggcacggaggacacccaacctgaagaaaaggagtctgaa
gacaccattgaaacggatgccatgattaagcaaaagaaagctaaatcttccaagtcaaca
aaagaagcgaaaaccagtgattctggcaaagggaaggggaaagcaaagaaaacaaaatga
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