Acipenser ruthenus (sterlet): 117409987
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Entry
117409987 CDS
T07327
Symbol
copa
Name
(RefSeq) LOW QUALITY PROTEIN: coatomer subunit alpha
KO
K05236
coatomer subunit alpha
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arut04131
]
117409987 (copa)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
arut04147
]
117409987 (copa)
Membrane trafficking [BR:
arut04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
117409987 (copa)
Exosome [BR:
arut04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117409987 (copa)
Exosomal proteins of bladder cancer cells
117409987 (copa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
TPR_COPA_B
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
117409987
NCBI-ProteinID:
XP_034778004
LinkDB
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Position
7:42551375..42574998
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AA seq
783 aa
AA seq
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MLTKFETKSARVKGLSFHPKRPWILASLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSSSDDQTIRIW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVETE
VRGISGVDLFGATDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
ELDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDLCRVLLTA
DPXSPSPLSSPLSLVWSGHDSGMLVFKLERERPAYSVHGNLLFYVKDRFLRQLDFNSSKD
TAVMQLRSGSKFPVFSMSYNPAENAVLLCTRATNLENSTYDLYSIPKETDSQNPDAPEGK
RSSGLTAVWVARNRFAVLDRMHSLLIKNLKNEIAKKVQVPNCEEIFYAGTGSLLLRDPDS
ITLFDVQQKRALASVKLAKVKYVVWSWIRHSVSLAWRNRLQARXVRDLNMFNKGTLFSSF
HWTLXSXGRNIIQQLSLDSMKLREFILYRGGVIQYVFCLSCDPCFFNGSVCSLSLSLSLS
LSPAIMICNRKLDSLCSIHENIRVKSGAWDETGVFIYTTSNHIKYALTSGDHGIIRTLDL
PIYVTRVRGNSVYCLDRECRPRVLTIDPTEYRFKLALVNRKYEEVLHMVRNAKLVGQSII
AYLQKKGYPEVALHFVKDEKTRFSLALECGNIEVALEANPRSWMNEGASFKLARWLWAST
TSL
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgttgaccaaatttgaaacgaaatcggcccgagtcaaaggtctcagttttcatccgaag
cgcccctggattcttgccagtctccacaatggagtgattcagctctgggactatcgcatg
tgcaccctgatcgataagttcgacgagcatgacggacctgtcagagggattgatttccac
aagcagcagcctctctttgtctctggtggagatgattataaaatcaaggtgtggaactac
aagttgaggcgttgtctcttcactctgctgggacacctggattacatccgcacgacgttc
tttcaccacgaatacccgtggatcctgagctcgtccgatgaccagaccatccggatctgg
aactggcaatcgcggacctgcgtttgtgtgctgactggtcataaccactatgtgatgtgc
gctcagtttcacccctctgaagatctggtggtgtcggccagcctcgaccagactgtacgg
gtttgggatatctccggcttgcgcaagaagaatctgtcccccggggcggtggagacggag
gtgcgaggaatctcgggggtggatctcttcggtgcgacagacgctgtggtgaaacacgtc
ctggagggtcacgaccgcggggtgaactgggcagcgttccaccccacgatgcccctgatc
gtgtcgggcgctgacgaccgtcaagtgaagatctggagaatgaacgaatccaaggcctgg
gagttggacacttgccgtggacattacaacaacgtgtcctgcgccgtcttccacccgaga
caggagctgattctgtccaactccgaggacaagagcatccgggtgtgggacatgtccaaa
cggacgggggtccagaccttccggcgggaccacgatctttgtcgcgttctcctcacagca
gatccctgatctccatcgcctctctcctctcctctttctctcgtctggtcagggcacgac
agcggcatgctggtcttcaagctggagcgagagcgtccagcctattccgtccacgggaac
ctgctgttctacgtgaaggatcgcttcctccgccagctggacttcaacagctccaaggat
acggccgtgatgcagctgcgcagcggctccaagtttcctgtgttcagcatgtcttacaac
cctgctgagaacgctgtcctcctgtgcacgagagccaccaatctggagaacagcacatat
gatctctactcgattcccaaggaaacggactctcagaatccagacgctcctgaaggaaag
cgttcctccggtctcactgcagtctgggtagctcgaaatcgatttgccgtcctggatcgc
atgcactcgctgctgatcaagaacctgaagaacgagatcgccaagaaggttcaggttccg
aactgtgaggagatcttctacgctgggaccgggagcctgctcctgagggacccggattca
atcaccctcttcgacgtgcagcagaaacgcgccctggcctccgtgaagctggccaaggtc
aagtacgtggtgtggtcctggatccgacactcggtaagcctggcgtggcgtaatcgactc
caagcacggtgagtgagagacctcaatatgtttaacaagggaacattattcagcagcttt
cattggactctatgaagctgagggaggaacattattcagcagctttcattggactctatg
aagctgagggagttcattctatatagagggggtgtgattcagtatgttttctgtctctcg
tgtgatccgtgtttttttaacgggtctgtctgctctctctctctctctctctctctctct
ctctctccagctattatgatctgcaacaggaagctggattctctgtgcagcattcacgag
aacatccgtgtgaaaagtggagcctgggacgagaccggcgtgtttatttacaccacgagc
aaccacatcaaatacgccctgacctccggagaccacggtataatccgcacccttgacctc
ccgatctacgtgacccgggtgcgagggaacagcgtgtactgtctggatcgcgagtgccgg
ccccgggttctgaccatcgaccccacggagtaccgcttcaaactggctctggtgaaccgc
aagtacgaggaggtgctgcacatggtacgcaatgccaagctggtgggtcagtccatcatc
gcctacctgcagaagaaaggctacccggaggtggcgctccacttcgtgaaggacgagaag
actcgcttcagcctggccctggagtgcggaaacatcgaggtcgctctggaagcaaaccca
aggtcatggatgaatgaaggggcgtcttttaagctggctcgctggctctgggcaagcacc
acctcgctgtag
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integrated database retrieval system
