Acipenser ruthenus (sterlet): 117410070
Help
Entry
117410070 CDS
T07327
Name
(RefSeq) protein PAT1 homolog 1-like
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117410070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arut03019
]
117410070
Messenger RNA biogenesis [BR:
arut03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117410070
mRNA degradation factors
5'-3' decay
Decapping complex
117410070
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
117410070
NCBI-ProteinID:
XP_034773875
LinkDB
All DBs
Position
Unknown
AA seq
725 aa
AA seq
DB search
MKRNNSLSLPSLCPMQSLEEDCPLEEEREALHVLVDEDDDIDQFNDDTFGSGAIDGDWRE
EHDRLAELDEKVGGTSPLQAPPPPACCCSPAPSSELDSLLLGGDENLAHSLSKLVLSAET
DYRELEDPAIMRAGLQQHKRAPLQPRSQLNSGSIWDNAMGLGGMSIPKLSQVQDSPLMSI
IKEVGLPKRPPMGRDEGRDLSERAPPPRSTSPVIGSPPVRAVPIGTPPKYPIGHNLNQQV
LCPTPVHVRASMQQRFSSAFNDRMSPNQLLNIANSQLRGHSFPPGVGPVLTQLQRAQMIG
AGQRVLLTQRMQQQTGRGQNGAGGDRPQRLGGSQDRRRDPYSNLMTSREKEWVSRIQMMQ
LQSTDPYLDDYYYQNYFEKLEKRPSPMDSNGDAHKREHTKLITPQVAKLEHAYRPVQFAG
SLGKLTVSSVNNPRKMIDTVVMTTRSDDEEKKEKQVWNKRRQILYTVEKTYSLLLDIQDF
ERKYLQTPEEERGALLEERRSKVGEMFENLRGRQTDADRNRFSDDHFLQIMRVRKGKLLV
SRLLPFLSMEHAVAVVMATARNLPYIAKKDAQDEVLPWLIEPFSIVIQHLASGPLTELLQ
DLSGLPGSPSELNSSTGNQQQAQSHTSTGQLGKVLTSKFGLTLLYLILSQGERLQSADSN
TELMENNRWTELVFGVTVELLNIPEASLAQPVLTPPSLLSFFSRYVDRQRLNLLQDKLQL
SPKPR
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaggaataattctctctccctcccttctctctgtcccatgcagtctctggaggaa
gactgccccctagaggaggaaagggaggcgctacacgtcttagtcgatgaagacgatgat
atcgaccagtttaatgatgatacgttcggatcgggagccatcgatggggactggagggaa
gaacacgaccgattggccgagctggatgagaaggtgggcgggacttcccctctgcaggcc
cctcctcctcctgcctgctgctgttcccccgcccccagctcagagctggacagtctgctg
ctgggaggggatgagaacctggcccacagtctgagcaagctggtgctgagcgcagagaca
gactacagggaactggaggatcccgcgatcatgagagcagggctgcagcagcacaagagg
gcgcccctgcagcccagatcccagttgaactctggcagtatttgggacaacgcgatggga
ctgggaggaatgagcattccaaaactgtcgcaggtccaggacagccccctcatgtcaatc
atcaaagaagtggggcttcccaagaggccaccaatgggacgggacgaggggagggacttg
tctgagcgagccccgcccccgcgctccacctcgcccgtgattggcagcccgccggtgagg
gcggtacccatcgggactccgcccaagtatccgattggtcacaatctcaaccagcaggtt
ctctgtccgacacctgtgcacgtcagagcatctatgcaacaaagattttctagtgctttc
aatgaccgcatgtctcctaatcagcttctcaacattgcgaattcccagctccgtgggcac
tccttccctccgggcgtcggccctgtcctcacccagctacagcgagcgcagatgattgga
gcaggccagcgagtcctgctgacccagagaatgcagcagcagaccgggaggggtcagaac
ggagctgggggggacaggccgcagcggctcggggggtcccaggacaggcgtcgggacccc
tacagcaatctgatgacgtcgagggagaaggagtgggtgtcccgcattcagatgatgcag
ctgcagagcacagacccctacctggatgactattactaccagaattattttgagaagtta
gagaagcgtccttctccaatggactccaacggagatgctcataagagagaacacacgaaa
ctcatcacaccccaagtggctaaactggagcacgcataccgaccagtgcagtttgcaggg
tctctaggaaagctcaccgtctccagcgtgaataacccacggaagatgattgacaccgtg
gtcatgacgacgcgctccgacgatgaggagaagaaagagaaacaagtctggaacaaacgg
agacagattctgtacacggtggagaagacgtacagtctgctgctggatattcaagacttt
gagaggaagtacctccagactccggaggaagagaggggggcgttgctggaggagcgccgc
tccaaagtgggggagatgttcgagaatctgcgagggaggcagaccgacgccgacagaaac
agattctcggacgatcacttccttcagatcatgcgggtgcggaaagggaagctgctggtc
tccagactcctccccttcctgagcatggagcacgctgtggcggtcgtcatggcgacggcc
cggaacctgccctacatcgccaagaaagacgcgcaggacgaggtgcttccctggctgatt
gaacccttctctatagttatccagcacttggccagcgggccgctcactgaattgttacaa
gacctcagtgggctaccggggagcccctccgaactgaacagctctactgggaaccagcag
caagcccagtcgcacaccagtacagggcaactgggcaaagtgctgacgagcaagtttggc
ctcacgctgctctacctgattctcagtcaaggagagaggttgcagagtgccgactcaaac
acagagctcatggaaaacaacagatggacagagctggtgtttggagtgactgtggagctg
ctgaatatcccagaggcctctctggctcaacctgtcttaaccccccccagcctgctgtcc
ttcttctctcgctatgtggacagacagagactcaacctgcttcaggacaagctgcaattg
tctcccaagcccaggtag
DBGET
integrated database retrieval system
