KEGG   Acipenser ruthenus (sterlet): 117410107
Entry
117410107         CDS       T07327                                 
Name
(RefSeq) splicing factor U2AF 65 kDa subunit isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
arut  Acipenser ruthenus (sterlet)
Pathway
arut03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:arut00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117410107
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:arut03041]
    117410107
Spliceosome [BR:arut03041]
 Complex A
  U2 snRNP components
   U2 related factors
    117410107
 Complex B
    117410107
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded AAA_8
Other DBs
NCBI-GeneID: 117410107
NCBI-ProteinID: XP_033872403
LinkDB
Position
45:complement(251831..292225)
AA seq 487 aa
MSEFDEFERQLNENKQERDKENRHRRPSPLRSRSDEKKTPTPTPTVTKSRERRSRERRSG
SKDRRRRSQQLHKLTTEQNEEINNSRSPPREKKKKVRKYWDVPPPGFEHITPLQYKAMQA
AGQIPATALLPTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQ
MRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDY
QPLPGMSENPSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVK
DSATGLSKGYAFCEYVDVNVMDQAHCSLSQAIAGLNGMQLGDKKLLVQRASVGAKNATLT
SINQTPVTLQVPGLMNTQVVQMGGLPTDVLCLMNMVAPEELLDDDEYEEIVEDVRDECSK
YGAVKSIEIPRPVDGLEVPGCGKIFVEFVSVFDCQKAMQGLTGRKFANRVVVTKYCDPDA
YHRRDFW
NT seq 1464 nt   +upstreamnt  +downstreamnt
atgtcggaattcgacgaatttgagagacagctgaacgagaacaaacaagagcgtgacaag
gagaaccgtcaccggcgtcccagccccctgcgaagccgcagcgacgagaagaagacgccg
acgccaacgccaacggtgacgaagagccgggagaggcggagccgagagagacgcagcggc
agcaaggatcgccgccggaggagtcaacagctgcataagttaaccactgagcagaatgag
gaaataaacaacagtcgctctcctccacgtgagaaaaagaagaaagtgagaaagtactgg
gatgtgcctccgccgggtttcgaacacatcacccccttgcagtacaaggcaatgcaggcc
gctggtcagatccctgccacagccctgctccccacgatgacccctgacgggctggcagtc
accccgactcctgtccctgtggtggggagccagatgacaaggcaggcgcgccgcctctac
gtggggaacatccctttcggcatcactgaggaagcgatgatggatttcttcaatgctcag
atgagactgggaggcttgactcaggcaccagggaacccagtcctggctgtgcaaatcaac
caggacaagaactttgctttcctagagttccgctcagttgacgagacgactcaggccatg
gcgttcgatggcatcatcttccagggacagagcctcaaaatcagacgcccccacgactac
cagcccctcccgggcatgagcgagaacccctcggtgtatgtgccaggcgtggtgtccact
gtagtccctgactctgctcacaagctgttcatcggaggcctgccgaactatctcaacgat
gaccaggtgaaggagctgttgacctcctttgggcctctgaaagcatttaacctggtgaag
gacagcgcaacggggctatcgaaggggtacgccttctgtgagtacgtggatgtcaacgtc
atggaccaggctcattgctctctctcgcaggccatagccgggttgaacgggatgcagctg
ggagacaagaagctgctggtgcagagagccagtgtaggggccaagaatgcaaccctgacc
agtataaaccagaccccagtcactctgcaggtcccggggctcatgaacacgcaggtggtt
cagatgggggggctccccacagatgtgctgtgcctcatgaacatggtggctccggaggag
ctgctggacgatgacgagtacgaggagatcgttgaggatgtgcgggacgagtgcagcaag
tatggggctgtcaaatccatcgagatcccgcgccccgtcgacgggctggaggtgccgggc
tgcggcaagatctttgtagagtttgtctcagtcttcgactgtcagaaggccatgcagggg
ctgactgggcgcaaatttgcaaacagagtcgtcgtgaccaaatactgcgacccagacgcc
taccatcgcagagacttctggtag

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