Acipenser ruthenus (sterlet): 117410502
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Entry
117410502 CDS
T07327
Name
(RefSeq) nuclear valosin-containing protein-like isoform X1
KO
K14571
ribosome biogenesis ATPase
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117410502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
arut03009
]
117410502
Ribosome biogenesis [BR:
arut03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
117410502
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Nucleolin_bd
AAA_lid_3
RuvB_N
AAA_5
AAA_16
AAA_2
AAA_14
AAA_22
TIP49
AAA_28
Mg_chelatase
RNA_helicase
NPHP3_N
AAA_33
nSTAND3
AAA_17
Vps4_C
Viral_helicase1
ABC_tran
AAA_18
TsaE
AAA_3
NACHT
Rad17
nSTAND_NTPase5
Zeta_toxin
NB-ARC
ATPase
IstB_IS21
Parvo_NS1
Sigma54_activ_2
DUF815
Motif
Other DBs
NCBI-GeneID:
117410502
NCBI-ProteinID:
XP_033872984
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All DBs
Position
6:7832832..7848078
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AA seq
853 aa
AA seq
DB search
MKNRGGYFVDNRLKERVKQYLRKSTSQFTDMSVMAADLQRMYSTEYGRRKRNAFRIQLEK
VYTVLCNESDLSALEGEHMAKRARQSQGADGEKDSFSEDSTDSDDQPEYPPTNQMNNSLM
SLYRKGTPDSVAPTLPKDQPAHSSTPRPAPSKTPRGTRVSQGGWFIDTTPGRIGEEKEES
ILIDLCEETREAPNPEKSLLETDKKKKGKMKNGKRRKEGEASGIDGEIESIIMNKKVKLK
APELQYSTLKFEDVGGNEETMKEVCKMLIHMRHPEVYQKLGVVPPRGFLLHGPPGCGKTL
LAQAIAGEMELPMLKVAATEMVSGVSGESEQKLRELFDQAVTSAPCILFIDEIDAITPKR
EVASKDMERRMVAQLLTCMDDLNALAATAQVMVIGATNRPDSLDPALRRAGRFDREICLG
IPDEGARLRILRTLCRKLKLPESFDFQQLAHLTPGYVGADLMALCREAAMSAVNRVLIEM
QEQSSQAAAAGGQPDLVGTKPVEQEQPAVPNQQPETIEETELRRLLRLLKDYTPLSEEQL
EKLHIEMEDFTSSLCSIQPSAKREGFATVPDVTWADIGALEEIRQELTMAILAPVRNPDQ
FKALGLSAPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQV
FQRAQNSAPCVIFFDEIDALCPRRSDHESGASVRVVNQLLTEMDGLETRKQVFIMAATNR
PDIIDPAILRPGRLDKSLYVGLPPPQDRFAILQTITKCGRRPLLDTDVNLEDIAHDKRSD
CFTGADLSALVREASINALRGHLCLQAPAATNAPVAEIRVSRQNFEDALKKVKPSVSKRD
QLMYDMLKESLCG
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacagaggcggctactttgtagacaacaggctcaaggagcgagtcaaacagtat
ttgaggaagagcaccagccagtttacagacatgtcagtcatggcagctgatctgcagaga
atgtacagcacagaatatggacggcggaaaagaaatgcattccggatccagttagagaaa
gtgtacacagtgttatgcaatgagtctgacctgtcagccttagagggggaacacatggct
aaaagggcaaggcaaagccaaggagctgatggggagaaggacagcttcagtgaagactcc
acagacagtgatgatcaacctgaatacccgcccaccaatcagatgaacaactccctgatg
tccctgtatcggaagggcactccggattctgtggctccaactctacccaaagatcagcca
gcacacagcagcacccccaggcctgccccctccaagacaccgaggggcaccagggtctct
cagggcggctggttcatcgataccacccccgggaggatcggggaggagaaagaggagagc
attctcatcgatctgtgtgaggagactcgagaggcacccaaccctgagaagtcccttctg
gaaacagataagaagaaaaaaggcaagatgaagaatgggaagagaagaaaagagggagag
gccagcggtatagacggagagatcgaatccattataatgaacaagaaagtcaagctcaaa
gctccagagctgcagtattccactctgaagtttgaagacgtaggaggcaatgaggagacc
atgaaggaggtgtgtaagatgctgattcacatgcgccaccctgaggtgtaccagaagctg
ggggtggtccctccccgggggttcctcctccacgggcctccaggctgcgggaagactctg
ctcgctcaggccatcgcgggggagatggagctgccaatgttgaaggtcgctgccacagag
atggtgtcgggcgtttcaggagaatctgagcagaagctaagggagctgtttgatcaagct
gtgaccagtgctccatgcatcctgttcattgatgaaattgacgccatcaccccaaagcga
gaagtggcttcgaaggacatggagcgacgaatggtggctcagctcctaacctgcatggat
gatctcaatgctcttgcagccacggctcaggtcatggttattggagccacgaaccggcca
gactctcttgacccggcactgaggcgagccggacgctttgacagggagatctgcctgggg
atccccgacgaaggggccagactgagaatcctgcgaacgctatgtcggaagctgaagctc
ccagaatcctttgactttcagcagctggcccacctgactccagggtacgtcggtgcagac
ctgatggccttgtgccgggaggcagccatgagcgcagtgaaccgggtccttatcgagatg
caggagcagagcagtcaggcagcagcagcgggcgggcagcctgacctcgttggcaccaag
ccagtggagcaagagcaacccgccgtcccaaatcagcaaccagaaaccatagaagagaca
gagctgcggaggttgctgaggctgctgaaggactacacccctctttcagaggagcagctg
gagaagctccacattgagatggaggatttcaccagctcgctgtgcagcatccagccgtcc
gccaaaagggaaggttttgctaccgtccctgatgtcacgtgggctgacatcggcgccctg
gaggagatccgccaagagctcaccatggccatcctggctccagttcgcaatcctgaccag
tttaaagctctgggtctcagtgcaccagctggggtgctgcttgctgggcccccaggctgt
ggtaaaactctgcttgctaaggctgttgccaatgaatctggtttgaacttcatctctgta
aagggcccagaattgttaaacatgtacgtgggagagagcgagcgcgctgtgcggcaggtt
ttccagagagcccaaaactccgccccctgcgtcatctttttcgatgagattgatgctctt
tgtcccagaaggtccgatcatgagtctggggcgagcgtgcgtgtggtcaaccagctgctt
actgagatggacggactggagactcgcaagcaggttttcatcatggctgccaccaacagg
ccagatattatcgaccctgcaatccttcgtccgggccggttggacaaatcgctgtacgtt
ggtttgccccctccccaagacagattcgccatccttcagaccatcaccaagtgtggtagg
aggcctctgctggacacagatgtcaatctagaagacatagcgcacgataaacgaagtgac
tgcttcacgggggctgacctgtccgctctggtccgagaggcttctatcaacgctctccgg
ggacacctctgtctccaggctcctgcagcaaccaacgctccagtggctgagatcagggtt
agccggcagaactttgaagatgctttgaagaaagtgaaaccgtctgtatcaaaaagggac
cagctaatgtatgacatgttgaaggagtcactgtgcggatga
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