Acipenser ruthenus (sterlet): 117410608
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Entry
117410608 CDS
T07327
Symbol
cpsf3
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117410608 (cpsf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arut03021
]
117410608 (cpsf3)
03019 Messenger RNA biogenesis [BR:
arut03019
]
117410608 (cpsf3)
Transcription machinery [BR:
arut03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
117410608 (cpsf3)
Messenger RNA biogenesis [BR:
arut03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
117410608 (cpsf3)
U7-dependent histone pre-mRNA processing factors
117410608 (cpsf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
117410608
NCBI-ProteinID:
XP_033873167
LinkDB
All DBs
Position
6:complement(76089302..76099005)
Genome browser
AA seq
691 aa
AA seq
DB search
MSAKRKADSLVPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDAL
PYIDLIDPAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKV
SNISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVK
LLYTGDFSRQEDRHLMAAEIPSVKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRE
GRCLIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVHAMNDKI
RKAININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVI
IAGYSVEGTLAKHIMSEPEEITTMSGQKLQLKMSVDYISFSAHTDYQQTSEFIRALKPPH
VILVHGEQNEMARLKAALIREYEDNDEAHIEVHNPRNTEAVTLNFRGEKLAKVMGSLADK
KSEQGQRVSGILVKRNFNYHIVTPSDLSNYTELSMSTVKQTQAIPFTGPFTLLESQLRNI
AGNIEEIENHDRPALKVFKNITLVQEPGMVVLEWIANPLNDMYADAVTTVVLEVQSNPKA
QKAMANTKQDRVDMETYQKRLEVMLQDMFGEESVHFKDGKDLSVTVDGKTAYINLETRTV
DYEEGSADDESLKEMVELAVQRLYDALNPAL
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcaaaaagaaaagcagacagtttggttcccgcggaggaaagcgaccagctcctg
atcagacctcttggtgctggacaggaggtgggaaggtcatgtattatcctggagtttaag
ggaagaaaaatcatgctggactgtggtatccaccctggtctggaggggatggatgctctc
ccttacattgatttgattgaccctgcagagattgaccttctccttataagccatttccat
ttggatcactgtggggccttgccttggtttctacagaagaccagtttcaaagggaggacg
ttcatgactcacgcaactaaagcgatttatcgatggctcctgtcagattatgtaaaagtc
agtaacatttcagcagatgacatgctgtacacagagacagacctggaagaaagcatggac
aagattgaaaccatcaacttccacgaagtgaaggaggtagcggggatcaaattttggtgc
taccatgctggccacgttctgggggcagccatgttcatgattgaaatagctggtgtgaag
ttgttgtacacaggagacttctctcggcaagaagacaggcatttgatggcagccgagatt
cccagtgtcaaaccggatattctcattattgaatccacctacggcacccacatccacgag
aagagggaagaacgagaggcacgcttctgcaacactgtgcacgacattgtgaacagggag
gggaggtgtctcattcctgtctttgccttggggagagcccaggagctgctgcttattctc
gatgaatactggcagaatcacccggagctacacgacattcccatctactatgcctcgtcc
ctggctaagaagtgcatggcagtgtatcagacttacgtccatgccatgaacgacaagatc
cgcaaggctatcaatatcaacaacccctttgttttcaagcacatcagcaacctgaaaagc
atggatcattttgatgacatcggccccagcgtggtcatggcctctccaggtatgatgcag
agtggcctgtccagggagctgtttgagagctggtgcactgataagaggaatggcgtcatc
attgcaggttacagtgtggaaggaacccttgccaagcacatcatgtctgaaccagaggag
atcaccactatgtccggacagaagctgcagctgaagatgtctgtggattacatctccttc
tctgctcacacagactatcagcagaccagcgagttcatccgggcactaaaaccgcctcac
gtgatcctggtccacggtgaacagaatgaaatggccaggctgaaggctgcgctgatccgt
gaatatgaagacaatgatgaagctcatatcgaagtacacaacccacgcaacactgaggct
gtgacacttaacttcagaggagagaaactcgccaaggttatgggatccctggcagacaaa
aagagtgaacaaggtcagagagtttcaggaatacttgtgaaacggaacttcaactaccac
atagtcactccatcagatctgtccaattatacagaactatcaatgagcacagttaaacag
acccaggccattcctttcacaggcccattcacactgctggagagtcagctacgcaatata
gcagggaatattgaagaaattgagaatcacgacaggcctgcactgaaggttttcaaaaac
atcacactggtgcaggaacctggaatggtggtattggagtggattgccaatccattgaat
gacatgtacgctgacgcagtgaccaccgtcgtcctggaggtgcagtccaatcccaaggct
cagaaagccatggcaaataccaaacaggatagagttgatatggaaacctaccagaagaga
ctggaagttatgctacaggacatgtttggagaagagtctgtacatttcaaagatggcaaa
gatctgtcagtcactgtggatgggaagactgcttatattaatctggagacacgaacagtg
gattacgaggagggcagtgcagacgatgagtccctgaaggaaatggtggagctggctgtg
cagagactttacgatgcccttaaccctgccctctga
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